BAC Information

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BAC

Clone NameB6Ng01-118I19
Chromosome6 (Build37)
Map Location 95,840,443 - 95,841,544
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043680, Kbtbd8, LOC435912, Suclg2
Downstream geneLOC665886, LOC545867, C630007B19Rik, LOC100043685, 1700123L14Rik, C130034I18Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118I19.bB6Ng01-118I19.g
ACCDH922997DH922998
length7891,093
definitionDH922997|Mus musculus domesticus DNA, BAC clone: B6Ng01-118I19, 5' end.DH922998|Mus musculus domesticus DNA, BAC clone: B6Ng01-118I19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaactgaggaatatcaaatggctgagaagcacctaaagaaata
ttcagcatccttagtcatcagggaaatgaaaatcaaaacaaccctgaggt
ttcacctcacaccagtcaaaatggaggagttaggtgacagcaggtgctgg
cgaggatgtggagaaagagtgtcacttctacattgttggtgggattgcaa
gctggtacaaccactctggaaatcagtctggcacttcctaagaaaattgg
agatagtactacctgaggaccagctataccactcctgggcatatacccaa
aagattctccaacaaggacacatgctccactatgttcatagcagccttat
ttataatagccagaagttagaaagaacccagatgtacttcagcagaggaa
tggatacagaaaatgtggtacatttgcacaatggagtactactcggctat
taaaaatgatgaattcataaaattcttaggcaaatggatggaactagaaa
atatcatcctgagtgaggtaacccaaccagaaaagaatatacatggtatg
cactcactgacaagtggatattagcccaaaatcttggaatacccacatta
caatttacagaccacatgaagctcaaaaagatcaaagtgcagatgcttca
gtccttcttagaaggagaacaaaatactcgcgggagcaaatatggagaca
aagtgcagagcagagactgaaggaaaggccatccagaggctgtatatgca
ggaacaccatcatagaagcagggggagggggaggggata

gaattctttaaaggaatatacaagctaagcatccgtcagagctagttagt
cttcttggtgaaaagttctgggaaatatgagaccattcataaatgccaga
gacattcttgagacctcttgtttgtgctgggctctatttccagggctatg
gatggatggatggcaaactaaacaaatgtagcccctgcccacaaagacac
atatggctttaggttggaagggtgatgaggaggacaaagatactgtgtta
tccatatttgtatcaactcagcaaagatgagtaaagcacgaaaattctct
gttatcctttgggaggacatctaaaaggaagccccaaagaaaagagaatc
caggaatcaatgcttgagtcaacctgggtgcaacacacaggtcaagaggg
aaccaagtaataataggcttcaccttcatattcgtagatctgagcacaag
tcacaaattaaggggcacaaaatttaaaaataaggggaaaaattcttgag
tttttaatcacattcccatgttgataaaatatttatgagctctctttcaa
ttaattagaataaactatgtaacactacaggaaacaaattgaaaatttaa
taaagtaagttcacttccaatttcttatgaagaaagaagctaattatatt
tagttctgtaattataactttaattaaaatataatgcaaaatattccata
aagtgaagtgaaaacagtactgagaaataaaatgcagactttaaaacaat
ttgctctttagataaaaatttataatttgaaaggaagcctttagtgtacc
gttttccaaaaatttcaccctttaaaggacaaactaaacagccttttcat
aagactaattgatgtttatttaccactgtaagcctattttttttttctgt
tgtgcaccaacgtctcttttagttgctgtagccatcttccctttattagt
gtgtttagagagacaagcctatttccctgtgcacactactattatgacac
atcccgttggctgtgaacaagctcagcttagcaataggaaaattgaagct
ctggtttgttaaaatgtgttaatgttctagttccctccatctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_95840443_95841544
seq2: B6Ng01-118I19.g_67_1159

seq1  GAATTCTTTAAAGGAATATACAAGCTAAGCATCCGTCAGAGCTAGTTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAAAGGAATATACAAGCTAAGCATCCGTCAGAGCTAGTTAGT  50

seq1  CTTCTTGGTGAAAAGTTCTGGGAAATATGAGACCATTCATAAATGCCAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTGGTGAAAAGTTCTGGGAAATATGAGACCATTCATAAATGCCAGA  100

seq1  GACATTCTTGAGACCTCTTGTTTGTGCTGGGCTCTATTTCCAGGGCTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTCTTGAGACCTCTTGTTTGTGCTGGGCTCTATTTCCAGGGCTATG  150

seq1  GATGGATGGATGGCAAACTAAACAAATGTAGCCCCTGCCCACAAAGACAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGATGGATGGCAAACTAAACAAATGTAGCCCCTGCCCACAAAGACAC  200

seq1  ATATGGCTTTAGGTTGGAAGGGTGATGAGGAGGACAAAGATACTGTGTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGCTTTAGGTTGGAAGGGTGATGAGGAGGACAAAGATACTGTGTTA  250

seq1  TCCATATTTGTATCAACTCAGCAAAGATGAGTAAAGCACGAAAATTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATTTGTATCAACTCAGCAAAGATGAGTAAAGCACGAAAATTCTCT  300

seq1  GTTATCCTTTGGGAGGACATCTAAAAGGAAGCCCCAAAGAAAAGAGAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATCCTTTGGGAGGACATCTAAAAGGAAGCCCCAAAGAAAAGAGAATC  350

seq1  CAGGAATCAATGCTTGAGTCAACCTGGGTGCAACACACAGGTCAAGAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATCAATGCTTGAGTCAACCTGGGTGCAACACACAGGTCAAGAGGG  400

seq1  AACCAAGTAATAATAGGCTTCACCTTCATATTCGTAGATCTGAGCACAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAAGTAATAATAGGCTTCACCTTCATATTCGTAGATCTGAGCACAAG  450

seq1  TCACAAATTAAGGGGCACAAAATTTAAAAATAAGGGGAAAAATTCTTGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAATTAAGGGGCACAAAATTTAAAAATAAGGGGAAAAATTCTTGAG  500

seq1  TTTTTAATCACATTCCCATGTTGATAAAATATTTATGAGCTCTCTTTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAATCACATTCCCATGTTGATAAAATATTTATGAGCTCTCTTTCAA  550

seq1  TTAATTAGAATAAACTATGTAACACTACAGGAAACAAATTGAAAATTTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAGAATAAACTATGTAACACTACAGGAAACAAATTGAAAATTTAA  600

seq1  TAAAGTAAGTTCACTTCCAATTTCTTATGAAGAAAGAAGCTAATTATATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTAAGTTCACTTCCAATTTCTTATGAAGAAAGAAGCTAATTATATT  650

seq1  TAGTTCTGTAATTATAACTTTAATTAAAATATAATGCAAAATATTCCATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTCTGTAATTATAACTTTAATTAAAATATAATGCAAAATATTCCATA  700

seq1  AAGTGAAGTGAAAACAGTACTGAGAAATAAAATGCAGACTTTAAAACAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAAGTGAAAACAGTACTGAGAAATAAAATGCAGACTTTAAAACAAT  750

seq1  TTGCTCTTTAGATAAAAATTTATAATTTGAAAGGAAGCCTTTAGTGTACC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTTTAGATAAAAATTTATAATTTGAAAGGAAGCCTTTAGTGTACC  800

seq1  GTTTTCCAAAAATTTCACCCTTT-AAGGACAAACTAAACAGCCTTTTCAT  849
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GTTTTCCAAAAATTTCACCCTTTAAAGGACAAACTAAACAGCCTTTTCAT  850

seq1  AAGACTAATTGATGTTTATTTACCACTGTAAGCCTATTTTTTTTTTCTGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTAATTGATGTTTATTTACCACTGTAAGCCTATTTTTTTTTTCTGT  900

seq1  TGTGCACCAACGTCTCCTTTTAGTTGCTGTAGCCATCTTCCCTTTATTAG  949
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGTGCACCAACGTCT-CTTTTAGTTGCTGTAGCCATCTTCCCTTTATTAG  949

seq1  TGTGTTTAGAGAGACAAGCCTATTTCCCTGTGCACACTACTATTTATGAC  999
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGTGTTTAGAGAGACAAGCCTATTTCCCTGTGCACACTACTA-TTATGAC  998

seq1  ACATCCCGTTGGCTGTGAACAAGGCTCAAGCTTTAAGCAATAGGAAAATT  1049
      |||||||||||||||||||||| |||| |||||  |||||||||||||||
seq2  ACATCCCGTTGGCTGTGAACAA-GCTC-AGCTT--AGCAATAGGAAAATT  1044

seq1  GAAAGCTCTGGTGTTGTTTAAAATGTGTTAATGTTCTTAGTCCCCTCCAT  1099
      | |||||||||| ||| ||||||||||||||||||| |||| ||||||||
seq2  G-AAGCTCTGGT-TTG-TTAAAATGTGTTAATGTTC-TAGTTCCCTCCAT  1090

seq1  CTG  1102
      |||
seq2  CTG  1093


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