BAC Information

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BAC

Clone NameB6Ng01-118L20
Chromosome6 (Build37)
Map Location 18,835,061 - 18,835,627
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-118L20.bB6Ng01-118L20.g
ACCDH923139DH923140
length1241,045
definitionDH923139|Mus musculus domesticus DNA, BAC clone: B6Ng01-118L20, 5' end.DH923140|Mus musculus domesticus DNA, BAC clone: B6Ng01-118L20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tccagtaaaactatctagatcatgatgggaggggaggcccttggtcccat
ggaggtttgatgccccagtgtaggaggatgctggaacagtggggttgaag
agggtgggtgggtaagagagggtg
gaattccttgatccacttagattggacgttaatacaagtagattagaatt
gatcaattcacattcttctacatgttaaccaccagttgtgccagcaccat
ttgtggaaaatgctgtctttttgacactggatggttttagctcccttgtc
aaagatcaagagaccataggtgtgtgggttcatttctgagtcttcaattc
tattgtattggtctacttgtctgtcgctctaccagtaccatgcagttttt
atcacaattgctctgtagtacagctctaggtcaggcatggtgactccagc
agaggtacatttatccttgagaagagtttttgatatcctaggttttttgt
tattccagatgaatttgaagattgccctttctaattcgttgaagaattga
gttggaattttgatggggattgcattgaatctttagattgcttttggcaa
gatagccatttttactatattgatcctggaaatccatgagcatgggagat
ctttccaccttctgagatcttctttaatttctttcttcagagacttgaag
tttttatcatacagatctttcacttccttagagtcacaccaaggtatttc
atattatttctgactattgagaagggtgttgtttccctaatttctttctc
agcctgtttattctttgtgtagagaaaggccattgacttgtttaagttaa
ttttatatccagctacttcactgaagctctttatcaggtttaggagttct
ctggtggaatttttaaggtcacttatatatactatcatatcatctgcaaa
gagtgatattttgacttcttcctttccaatttgtattcccttgatctcct
tttgttgtcgaattgctctggctaggacttcaagtacaatgttgaatagg
tagggagaagtggacagccttgtctagtctctgattttagtggaatgctt
ccagcttctcgcatttactttaatgtgcctactgcctgctgtagatgctt
ttatcatgtttaggtatgggccttgattctgatctttcagacttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835061_18835627
seq2: B6Ng01-118L20.g_71_637 (reverse)

seq1  AAAGATCTGTATGATAAAAACTTCAAATCTCTGAAGAAAGAAATTAAAGA  50
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AAAGATCTGTATGATAAAAACTTCAAGTCTCTGAAGAAAGAAATTAAAGA  50

seq1  AGATCTCAGAAGATGGAAAAATCTCCCATGCTCATGGATTGGCAGGATCA  100
      |||||||||||| |||||| ||||||||||||||||||||  ||||||||
seq2  AGATCTCAGAAGGTGGAAAGATCTCCCATGCTCATGGATTTCCAGGATCA  100

seq1  ACATTGTAAAAATGGCTCTCTTGCCAAAAGCAATCTGCAGATTCAATGCA  150
      | || |||||||||||| ||||||||||||||||||  ||||||||||||
seq2  ATATAGTAAAAATGGCTATCTTGCCAAAAGCAATCTAAAGATTCAATGCA  150

seq1  ATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAGGAGCAAT  200
      |||||||||||||||||||||||||||||||||||||||||| | |||||
seq2  ATCCCCATCAAAATTCCAACTCAATTCTTCAACGAATTAGAAAGGGCAAT  200

seq1  TTGCAAATTCATCTGGAATAACAAAAAACCTAGGATAGCAAAACCTCTTC  250
       | |||||||||||||||||||||||||||||||||| ||||| ||||||
seq2  CTTCAAATTCATCTGGAATAACAAAAAACCTAGGATATCAAAAACTCTTC  250

seq1  TCAAGGATAAAAGAACCTCTGGTGGAATCACCATGCCTGACCTAAAGCTT  300
      ||||||||||| | ||||||| |||| ||||||||||||||||| |||| 
seq2  TCAAGGATAAATGTACCTCTGCTGGAGTCACCATGCCTGACCTAGAGCTG  300

seq1  TACTACAGAGCAATTGTGGTAAAAACTGCATGGTACTGGTATAGAGACAG  350
      |||||||||||||||||| |||||||||||||||||||||| || |||||
seq2  TACTACAGAGCAATTGTGATAAAAACTGCATGGTACTGGTAGAGCGACAG  350

seq1  ACAAGTAGACCAATGGAATAGAATTGAAGACCCAGAGATGAACCCACACA  400
      ||||||||||||||  ||||||||||||||| |||| |||||||||||||
seq2  ACAAGTAGACCAATACAATAGAATTGAAGACTCAGAAATGAACCCACACA  400

seq1  CCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATCCAGTGGAAG  450
      ||||||||| ||||||||| ||||||||||||||||||||||||||  | 
seq2  CCTATGGTCTCTTGATCTTTGACAAGGGAGCTAAAACCATCCAGTGTCAA  450

seq1  AAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTTGTTATCTTG  500
      ||||||||||||||| |||| ||||||||||||||||||| |||| | ||
seq2  AAAGACAGCATTTTCCACAAATGGTGCTGGCACAACTGGTGGTTAACATG  500

seq1  TAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTAAGGTCAAAT  550
      ||||||||||||||| |||| || || |||| | |||| ||| ||| |||
seq2  TAGAAGAATGTGAATTGATCAATTCTAATCTACTTGTATTAACGTCCAAT  550

seq1  CTAAGTGGATCAAGGAA  567
      |||||||||||||||||
seq2  CTAAGTGGATCAAGGAA  567