BAC Information

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BAC

Clone NameB6Ng01-119A13
Chromosome6 (Build37)
Map Location 19,482,878 - 19,529,778
singlet/doubletdoublet
Overlap genenone
Upstream geneEG545829, Lsm8, Ankrd7, LOC626180, Eif3s6-ps4
Downstream geneLOC100040838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119A13.bB6Ng01-119A13.g
ACCDH923351DH923352
length2511,163
definitionDH923351|Mus musculus domesticus DNA, BAC clone: B6Ng01-119A13, 5' end.DH923352|Mus musculus domesticus DNA, BAC clone: B6Ng01-119A13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(19,482,878 - 19,483,128)(19,528,595 - 19,529,778)
sequence
tttaggaaataaatggctaattaagaaacattgtatttattgacgttcct
cctctgttttcacttatctttgtgggcattatggacagaatgctgaccct
ggtgtttccaataattccagtattggaattagaggtgtgttcctctacac
ccagctctaataatagtatttatttattactaaaataactatatatatat
atatatatgtatatatatatatatgtgtgtgtgtgtgtgtgtgtatatgt
t
gaattcatcctgagggttgttgacaatagggtttgtagcagaagcagcag
ctgctccagcctgtggggatccccccaggggacaaggttttgatggagtc
ctagtgaacatttccaaccaagaagtgtagtcatttaatccaagcctgat
ccttggaacctggaccattgccacagatcaagcaactgtcatttggcagt
tgtacctgatgcaactgcctgctgggtaccttcctgtgttatttacttcc
catgtagtaggcttggtttgctggcaaactccttgctcagtgtaattcct
ggatttgatgtcctggcttcaaatgacaatgtccataaatctggctgaca
acacttccagtttagagattaggagtctatgaaagaggaggagacaggta
attgtcatcactgggcagcaaataaacacttttaagcaaagctaacagtt
cctttggcaccacattaaagcacaaagaaaagctgttcaggcaataatgc
aagccactgcacctgagcagttaaaaatttgatggcttatagaaacctga
cacatacacacacacacacacacacacatacacacacacacacacacaca
cacacacacacacacacatatatatacagaaatgttagtttccattgata
gcagttgctagcttataacttcatagtttatgtagagtaataagaaaata
tgtgtttactaattgatttagaggttcacaggagtcttgcaaaatgtaag
taaaaagtacatcaaataagaaatcaaatatgtgttttggcttaaagaca
ggggcaggattgaaacttttggactaactcccagcctatacaggattagc
tgtgtgaacttgctcaggttctaacactccatttctttacctattacatg
gtggcaacaattctacccatgacatcatgtatttttaatttatttgttta
catggttacaggtttagtttacctcactcatctacctaaatgtctgttag
agggatgtctgaattaaatcagtagtgattatgcctcagttcacaaactg
cttagtgaataatttttccacatagatatcaattacatcaaggatattac
ttttacatacaaggaaacttctggctaatctaggaattttttattcatgt
agatgtcaatgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19482878_19483128
seq2: B6Ng01-119A13.b_50_300

seq1  TTTAGGAAATAAATGGCTAATTAAGAAACATTGTATTTATTGACGTTCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGAAATAAATGGCTAATTAAGAAACATTGTATTTATTGACGTTCCT  50

seq1  CCTCTGTTTTCACTTATCTTTGTGGGCATTATGGACAGAATGCTGACCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTTTTCACTTATCTTTGTGGGCATTATGGACAGAATGCTGACCCT  100

seq1  GGTGTTTCCAATAATTCCAGTATTGGAATTAGAGGTGTGTTCCTCTACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTCCAATAATTCCAGTATTGGAATTAGAGGTGTGTTCCTCTACAC  150

seq1  CCAGCTCTAATAATAGTATTTATTTATTACTAAAATAACTATATATATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTCTAATAATAGTATTTATTTATTACTAAAATAACTATATATATAT  200

seq1  ATATATATGTATATATATATATATGTGTGTGTGTGTGTGTGTGTATATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATGTATATATATATATATGTGTGTGTGTGTGTGTGTGTATATGT  250

seq1  T  251
      |
seq2  T  251

seq1: chr6_19528595_19529778
seq2: B6Ng01-119A13.g_67_1229 (reverse)

seq1  GACATATGACATCTTACCATGAATTAAAAATATTCCCTAGATTATGCCAG  50
      ||||| ||||||||   ||||||| |||||   | ||||||||| |||||
seq2  GACAT-TGACATCT--ACATGAATAAAAAA---TTCCTAGATTA-GCCAG  43

seq1  AAGTTTCCTTTGTATGTTAAAAGTAATATTCCTTGAATGTAAATTGATAT  100
      |||||||| ||||||| ||||||||||| |||||| |||| |||||||||
seq2  AAGTTTCC-TTGTATG-TAAAAGTAATA-TCCTTG-ATGT-AATTGATAT  88

seq1  ACTAATGTGGAAAAATATATTCACCTAAGCAGTTTGTGAACTTGAGGCAT  150
       || |||||||||||| |||||| ||||||||||||||||| ||||||||
seq2  -CT-ATGTGGAAAAAT-TATTCA-CTAAGCAGTTTGTGAAC-TGAGGCAT  133

seq1  AATCACTACTGATTTAAATTCAGACATCCCTCTAACAGACATTTAGGTAG  200
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AATCACTACTGATTT-AATTCAGACATCCCTCTAACAGACATTTAGGTAG  182

seq1  ATGAGGTGAGGTAAACTAAACCTTGTAACCATGTTAAACAAATAAATTAA  250
      |||| ||||||||||||||||| |||||||||| ||||||||||||||||
seq2  ATGA-GTGAGGTAAACTAAACC-TGTAACCATG-TAAACAAATAAATTAA  229

seq1  AAATACATGATGTCATGGGTAGAATTGTTGCCACCATGTAATAGGTAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACATGATGTCATGGGTAGAATTGTTGCCACCATGTAATAGGTAAAG  279

seq1  AAATGGAGTGTTAGAACCTGAGCAAGTTCACACAGCTAATCCTGTATAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGAGTGTTAGAACCTGAGCAAGTTCACACAGCTAATCCTGTATAGG  329

seq1  CTGGGAGTTAGTCCAAAAGTTTCAATCCTGCCCCTGTCTTTAAGCCAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGTTAGTCCAAAAGTTTCAATCCTGCCCCTGTCTTTAAGCCAAAA  379

seq1  CACATATTTGATTTCTTATTTGATGTACTTTTTACTTACATTTTGCAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATATTTGATTTCTTATTTGATGTACTTTTTACTTACATTTTGCAAGA  429

seq1  CTCCTGTGAACCTCTAAATCAATTAGTAAACACATATTTTCTTATTACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGTGAACCTCTAAATCAATTAGTAAACACATATTTTCTTATTACTC  479

seq1  TACATAAACTATGAAGTTATAAGCTAGCAACTGCTATCAATGGAAACTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAAACTATGAAGTTATAAGCTAGCAACTGCTATCAATGGAAACTAA  529

seq1  CATTTCTGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTGTATATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  579

seq1  TGTGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTCAGGTTTCTATAAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGTGTGTGTGTGTGTGTGTGTGTATGTGTCAGGTTTCTATAAGC  629

seq1  CATCAAATTTTTAACTGCTCAGGTGCAGTGGCTTGCATTATTGCCTGAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAATTTTTAACTGCTCAGGTGCAGTGGCTTGCATTATTGCCTGAAC  679

seq1  AGCTTTTCTTTGTGCTTTAATGTGGTGCCAAAGGAACTGTTAGCTTTGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTTCTTTGTGCTTTAATGTGGTGCCAAAGGAACTGTTAGCTTTGCT  729

seq1  TAAAAGTGTTTATTTGCTGCCCAGTGATGACAATTACCTGTCTCCTCCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAGTGTTTATTTGCTGCCCAGTGATGACAATTACCTGTCTCCTCCTC  779

seq1  TTTCATAGACTCCTAATCTCTAAACTGGAAGTGTTGTCAGCCAGATTTAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAGACTCCTAATCTCTAAACTGGAAGTGTTGTCAGCCAGATTTAT  829

seq1  GGACATTGTCATTTGAAGCCAGGACATCAAATCCAGGAATTACACTGAGC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTGTCATTTGAAGCCAGGACATCAAATCCAGGAATTACACTGAGC  879

seq1  AAGGAGTTTGCCAGCAAACCAAGCCTACTACATGGGAAGTAAATAACACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTTTGCCAGCAAACCAAGCCTACTACATGGGAAGTAAATAACACA  929

seq1  GGAAGGTACCCAGCAGGCAGTTGCATCAGGTACAACTGCCAAATGACAGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGTACCCAGCAGGCAGTTGCATCAGGTACAACTGCCAAATGACAGT  979

seq1  TGCTTGATCTGTGGCAATGGTCCAGGTTCCAAGGATCAGGCTTGGATTAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGATCTGTGGCAATGGTCCAGGTTCCAAGGATCAGGCTTGGATTAA  1029

seq1  ATGACTACACTTCTTGGTTGGAAATGTTCACTAGGACTCCATCAAAACCT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTACACTTCTTGGTTGGAAATGTTCACTAGGACTCCATCAAAACCT  1079

seq1  TGTCCCCTGGGGGGATCCCCACAGGCTGGAGCAGCTGCTGCTTCTGCTAC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCCTGGGGGGATCCCCACAGGCTGGAGCAGCTGCTGCTTCTGCTAC  1129

seq1  AAACCCTATTGTCAACAACCCTCAGGATGAATTC  1184
      ||||||||||||||||||||||||||||||||||
seq2  AAACCCTATTGTCAACAACCCTCAGGATGAATTC  1163