BAC Information

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BAC

Clone NameB6Ng01-120K09
Chromosome6 (Build37)
Map Location 18,054,255 - 18,055,348
singlet/doubletsinglet
Overlap geneAsz1
Upstream geneTes, EG232599, Cav2, Cav1, Met, Capza2, St7, Wnt2
Downstream geneLOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7, LOC626180
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120K09.bB6Ng01-120K09.g
ACCDH924541DH924542
length1,082571
definitionDH924541|Mus musculus domesticus DNA, BAC clone: B6Ng01-120K09, 5' end.DH924542|Mus musculus domesticus DNA, BAC clone: B6Ng01-120K09, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaatatctattagcaacatcttagtgaggtggcgtcactgcttc
aatgaaccaaactgcatttacgtatataccattgctttttagaacggact
cacagtactaagcaacagttgttgaataacaaaaaaaaaaacagtcttaa
taaacgatctatgaaaaaactttgttttcaagtatacaaagcaaatttca
aatagtttttcacaaaattactggctttttgatattgctttcagtgactt
tcctttaaaaacaaaaatacctagcatgttatttaaaagtacacattaat
ataacctgtcataaaaataacaaaaactatgcattgcaatctattttctt
ggagaagcagtttttaaaaacatgtatatttaagtttgagttttcatatc
cctatacaactaatagatttttgcttaaagtactttaatttttcacttag
tataacttttgtttagaagtcaaagaatcacagtaaactgtcagttaaat
tttctcaagcattttacttacccttatcaaagctggcattagcacctctg
tccaaaaggaagcgaaccagctctgcattggccacactagcggcatacat
aagaggggtccatccatagcggaagctggagtccacattaatgcctatcc
atgaggagaacatctgttttaaagacttaatttcttaattgtgtgtatac
atataattatgtataattttatatattatatatttataatttatatgtat
tatatataaaatgcaatacacacatgtatgaatgtttacctgtacaaatg
tatacataccaccggtatgccgagagacaagggggcataagaagtccagg
aactttaatggagttacagatggttttcagctaccatatacatgtctcag
aaaggtttcttgataagaaaggcttaaaaactacatgaattggtattata
aatttgctaccttcagtttcatggtgcactacattcatgagacccatatg
actatatttaacacatataatatagcactgtaaaataaaattttctatga
tattttctttggtgtatgggggaagatttttt
tttgtattagtcaactgcacagaagttatttagattgataagattcaggt
tttagtcatttatttgcagagtattgatacatgcttggaagaattaaata
tcacctaggcagatagaaatattaaaaatcacaattgaaataaaaactaa
ttcctagccagacattcattattcttatcttttgtttccttccttccttt
ctttcctcctttctctctctctctctctctctctctctctctctctctct
ctctctgtgtgtgtgtgtgtgtgtgtgtataaaaaaaaagaaaagagata
tattacacactctctcactttttttttcgaaacacacacacccaactggg
gggggggggggagcgcgatctaaaaatctcttttttttttgtgcgcgctc
ccccacataatattttttatgagtacggtcactctgtgtatttataatat
aaaaaaaaaattttctttgtgagaaaaaaagagagagacaacactcactc
tccgcgcgtgcgagtgtgttttttttctctttttctcacagagagagatt
tttattaaactcttttttagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18054255_18055348
seq2: B6Ng01-120K09.b_46_1127

seq1  GAATTCAAATATCTATTAGCAACATCTTAGTGAGGTGGCGTCACTGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATATCTATTAGCAACATCTTAGTGAGGTGGCGTCACTGCTTC  50

seq1  AATGAACCAAACTGCATTTACGTATATACCATTGCTTTTTAGAACGGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAACCAAACTGCATTTACGTATATACCATTGCTTTTTAGAACGGACT  100

seq1  CACAGTACTAAGCAACAGTTGTTGAATAACAAAAAAAAAAACAGTCTTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGTACTAAGCAACAGTTGTTGAATAACAAAAAAAAAAACAGTCTTAA  150

seq1  TAAACGATCTATGAAAAAACTTTGTTTTCAAGTATACAAAGCAAATTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACGATCTATGAAAAAACTTTGTTTTCAAGTATACAAAGCAAATTTCA  200

seq1  AATAGTTTTTCACAAAATTACTGGCTTTTTGATATTGCTTTCAGTGACTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGTTTTTCACAAAATTACTGGCTTTTTGATATTGCTTTCAGTGACTT  250

seq1  TCCTTTAAAAACAAAAATACCTAGCATGTTATTTAAAAGTACACATTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTAAAAACAAAAATACCTAGCATGTTATTTAAAAGTACACATTAAT  300

seq1  ATAACCTGTCATAAAAATAACAAAAACTATGCATTGCAATCTATTTTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCTGTCATAAAAATAACAAAAACTATGCATTGCAATCTATTTTCTT  350

seq1  GGAGAAGCAGTTTTTAAAAACATGTATATTTAAGTTTGAGTTTTCATATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAAGCAGTTTTTAAAAACATGTATATTTAAGTTTGAGTTTTCATATC  400

seq1  CCTATACAACTAATAGATTTTTGCTTAAAGTACTTTAATTTTTCACTTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATACAACTAATAGATTTTTGCTTAAAGTACTTTAATTTTTCACTTAG  450

seq1  TATAACTTTTGTTTAGAAGTCAAAGAATCACAGTAAACTGTCAGTTAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTTTTGTTTAGAAGTCAAAGAATCACAGTAAACTGTCAGTTAAAT  500

seq1  TTTCTCAAGCATTTTACTTACCCTTATCAAAGCTGGCATTAGCACCTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAAGCATTTTACTTACCCTTATCAAAGCTGGCATTAGCACCTCTG  550

seq1  TCCAAAAGGAAGCGAACCAGCTCTGCATTGGCCACACTAGCGGCATACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAAGGAAGCGAACCAGCTCTGCATTGGCCACACTAGCGGCATACAT  600

seq1  AAGAGGGGTCCATCCATAGCGGAAGCTGGAGTCCACATTAATGCCTATCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGGGTCCATCCATAGCGGAAGCTGGAGTCCACATTAATGCCTATCC  650

seq1  ATGAGGAGAACATCTGTTTTAAAGACTTAATTTCTTAATTGTGTGTATAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGGAGAACATCTGTTTTAAAGACTTAATTTCTTAATTGTGTGTATAC  700

seq1  ATATAATTATGTATAATTTTATATATTATATATTTATAATTTATATGTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATTATGTATAATTTTATATATTATATATTTATAATTTATATGTAT  750

seq1  TATATATAAAATGCAATACACACATGTATGAATGTTTACCTGTACAAATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATAAAATGCAATACACACATGTATGAATGTTTACCTGTACAAATG  800

seq1  TATACATACCACCGGTATGCCGAGAGACAAGGGGGCATAAGAAGTCCAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATACCACCGGTATGCCGAGAGACAAGGGGGCATAAGAAGTCCAGG  850

seq1  AACTTTAATGGAGTTACAGATGGTTTTCAGCTACCATATACATGTCTCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTAATGGAGTTACAGATGGTTTTCAGCTACCATATACATGTCTCAG  900

seq1  AAAGGTTTCTTGATAAGAAAGGCTTAAAAAACTACATGAATTGGTATTAA  950
      ||||||||||||||||||||||||| ||||||||||||||||||||||| 
seq2  AAAGGTTTCTTGATAAGAAAGGCTT-AAAAACTACATGAATTGGTATTA-  948

seq1  TAAAATTTGCTACCTTCAGTTTCATGGTGGCACTACATTCAATGAGACCC  1000
        |||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  -TAAATTTGCTACCTTCAGTTTCATGGT-GCACTACATTC-ATGAGACCC  995

seq1  AATATGACTAATATTTACCACATAATAAATATAGCACCTGTAATATAAAA  1050
       |||||||| ||||||| ||||||   ||||||||| |||||| || |||
seq2  -ATATGACT-ATATTTAACACATA--TAATATAGCA-CTGTAAAAT-AAA  1039

seq1  ATTTTCTATGATATTTTCTATGGTGGTATTGGGGAAGATTTTGT  1094
      ||||||||||||||||||| |||| |||| |||||||||||| |
seq2  ATTTTCTATGATATTTTCTTTGGT-GTATGGGGGAAGATTTTTT  1082