BAC Information

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BAC

Clone NameB6Ng01-120K11
Chromosome6 (Build37)7 (Build37)
Map Location 18,835,441 - 18,835,96892,186,924 - 92,187,920
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120K11.bB6Ng01-120K11.g
ACCDH924545DH924546
length962985
definitionDH924545|Mus musculus domesticus DNA, BAC clone: B6Ng01-120K11, 5' end.DH924546|Mus musculus domesticus DNA, BAC clone: B6Ng01-120K11, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,441 - 18,835,968)(92,186,924 - 92,187,920)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgtagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgccggtgtcttttgccttgcagaaattttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgacaacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaaatcaagtg
accataggtgtgtgggttcatttctgggtcttaaattctattccattggt
ctacttgtctgtctgtataccagtaccatgcggtttttatcacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccagaggttccttt
atccttgagaagagtttttgctatcctaggttttttgttattccagatga
atttgaaaattgctccttctaattcgttggaggattgagttggaattttg
atggggattgcattgaatctggagatggcttttggatagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagacctttccatcttc
tgagatcttctttaatttctttcttcagagacttgaagttcttatcatac
agatcttcacttcctagttagagtcacgccgagatatttatattatttgt
gactattgagaa
gaattcaatgatttctttactttggtagatgtgatggtttgtatatcctt
ggaccagggagtggcaccatctgaaggtgtggccttggtggaataggtgt
gacctggttggaatgggtgtgtcactgtgggtgtgggtataagatcctca
ccctagttgcctggaagtcagtcttccactagcagcctttggattaagac
atagaactatcagctcctgctgcgccatgcctgcctggatactgccatgc
tcccaccttgatgataatggactgaacctctgaacttgtaaaccagcccc
aattaaatgttgttttttttttttataagacttgccttggtcatggtgtc
tgttcacagcaggaaaaccctaactaagacaatagacttccataaatcat
gaattagtaaaatatttgcaacctcttattaaattttagattatgtgtgt
gatgcactcatggaataatgcatatagaaatcatattttatccaaaagaa
tgtctgaataaagcttatagaatatttgatgcctagagttttagaaatta
ttcagattttgagtccacacagtacttcttgtatttatactttcttcaaa
aataatattaaatttctacctactttaatttttcatcctttaacctttag
cttgtttggtccccctttaaaatctactcttagttcatatgaacattcaa
gaagtaggacctctctttttacttcaaataatagattatctatattgtct
gacagaattaaattggtgtggagacatctccatggactatttgcagcctg
gggctgagtgtggtggatacatggactacatttttgcacactagaagaga
ctattaatagaaagcgaatagagaactgaagtatccacatcctttagcca
gtaggacattcagagcaggagaatacaacatccaccccaaatctttaacc
caaaattttcctgcaaatgtgaatgtggagtagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835441_18835968
seq2: B6Ng01-120K11.b_48_575 (reverse)

seq1  CCCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAG  50
      |||||| ||||||||||||||||||||||||||||| |||||||||||||
seq2  CCCAGAAATGAACCCACACACCTATGGTCACTTGAT-TTCGACAAGGGAG  49

seq1  CTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGG  99

seq1  CACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATC  150
      |||||||||||||| || |||||||||||| |||||||||||||||||||
seq2  CACAACTGGTTGTTGTCATGTAGAAGAATGCGAATCGATCCATACTTATC  149

seq1  TCCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC  199

seq1  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  249

seq1  ATGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGT  299
      ||||||| ||||||||| ||||||||||||||||||||||| ||||||||
seq2  ATGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGT  299

seq1  GAGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCA  349
       || | |||||| |||||||||||||||||||||||||||| ||||||||
seq2  AAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAATTTCTGCA  349

seq1  AGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAA  399
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGGCAAAAGACACCGGCAATAAGACAAAAAGACCACCAACAGATTGGGAA  399

seq1  AGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATA  449

seq1  TAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATA  499
      ||||||||||||||||||||||| |||||||||||||||||||||||| |
seq2  TAAAGAACTCAAGAAGGTGGACTACAGAAAATCAAATAACCCCATTAAAA  499

seq1  AATGGGGCTCAGAACTGAACAAAGAATTC  528
      |||||||||||||||||||||||||||||
seq2  AATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr7_92186924_92187920
seq2: B6Ng01-120K11.g_66_1050

seq1  GAATTCAATGATTTCTTTACTTTGGTAGATGTGATGGTTTGTATATCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATGATTTCTTTACTTTGGTAGATGTGATGGTTTGTATATCCTT  50

seq1  GGACCAGGGAGTGGCACCATCTGAAGGTGTGGCCTTGGTGGAATAGGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAGGGAGTGGCACCATCTGAAGGTGTGGCCTTGGTGGAATAGGTGT  100

seq1  GACCTGGTTGGAATGGGTGTGTCACTGTGGGTGTGGGTATAAGATCCTCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTGGTTGGAATGGGTGTGTCACTGTGGGTGTGGGTATAAGATCCTCA  150

seq1  CCCTAGTTGCCTGGAAGTCAGTCTTCCACTAGCAGCCTTTGGATTAAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGTTGCCTGGAAGTCAGTCTTCCACTAGCAGCCTTTGGATTAAGAC  200

seq1  ATAGAACTATCAGCTCCTGCTGCGCCATGCCTGCCTGGATACTGCCATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAACTATCAGCTCCTGCTGCGCCATGCCTGCCTGGATACTGCCATGC  250

seq1  TCCCACCTTGATGATAATGGACTGAACCTCTGAACTTGTAAACCAGCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCACCTTGATGATAATGGACTGAACCTCTGAACTTGTAAACCAGCCCC  300

seq1  AATTAAATGTTGTTTTTTTTTTTTATAAGACTTGCCTTGGTCATGGTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATGTTGTTTTTTTTTTTTATAAGACTTGCCTTGGTCATGGTGTC  350

seq1  TGTTCACAGCAGGAAAACCCTAACTAAGACAATAGACTTCCATAAATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCACAGCAGGAAAACCCTAACTAAGACAATAGACTTCCATAAATCAT  400

seq1  GAATTAGTAAAATATTTGCAACCTCTTATTAAATTTTAGATTATGTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGTAAAATATTTGCAACCTCTTATTAAATTTTAGATTATGTGTGT  450

seq1  GATGCACTCATGGAATAATGCATATAGAAATCATATTTTATCCAAAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCACTCATGGAATAATGCATATAGAAATCATATTTTATCCAAAAGAA  500

seq1  TGTCTGAATAAAGCTTATAGAATATTTGATGCCTAGAGTTTTAGAAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGAATAAAGCTTATAGAATATTTGATGCCTAGAGTTTTAGAAATTA  550

seq1  TTCAGATTTTGAGTCCACACAGTACTTCTTGTATTTATACTTTCTTCAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGATTTTGAGTCCACACAGTACTTCTTGTATTTATACTTTCTTCAAA  600

seq1  AATAATATTAAATTTCTACCTACTTTAATTTTTCATCCTTTAACCTTTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATATTAAATTTCTACCTACTTTAATTTTTCATCCTTTAACCTTTAG  650

seq1  CTTGTTTGGTCCCCCTTTAAAATCTACTCTTAGTTCATATGAACATTCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTGGTCCCCCTTTAAAATCTACTCTTAGTTCATATGAACATTCAA  700

seq1  GAAGTAGGACCTCTCTTTTTACTTCAAATAATAGATTATCTATATTGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGGACCTCTCTTTTTACTTCAAATAATAGATTATCTATATTGTCT  750

seq1  GACAGAATTAAATTGGTGTGGAGACATCTCCATGGACTATTTGCAGGCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GACAGAATTAAATTGGTGTGGAGACATCTCCATGGACTATTTGCA-GCCT  799

seq1  GGGGCTGAGTGTGGTGGATACATGGACTACATTTTTGCAACACTAGAAGA  850
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GGGGCTGAGTGTGGTGGATACATGGACTACATTTTTGC-ACACTAGAAGA  848

seq1  GACTATTATCAGAAGGCG-ATAGAGAAACTGAAGTATCCACATCCTATAG  899
      ||||||||  |||| ||| |||||| |||||||||||||||||||| |||
seq2  GACTATTAATAGAAAGCGAATAGAG-AACTGAAGTATCCACATCCTTTAG  897

seq1  CCAAGTAGGACATTCAGAGGCAGGAGAATAACAACAATCCACCCACAAAA  949
      || ||||||||||||||| |||||||||| ||||| |||||||  | |||
seq2  CC-AGTAGGACATTCAGA-GCAGGAGAAT-ACAAC-ATCCACC--CCAAA  941

seq1  TCTTCAACCCCAAAATTTTTCTTGCAAGATGTGAAGTGTGGAGTAGTC  997
      |||| |||||  ||| ||||| ||||| ||||||| ||||||||||||
seq2  TCTTTAACCC--AAAATTTTCCTGCAA-ATGTGAA-TGTGGAGTAGTC  985