BAC Information

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BAC

Clone NameB6Ng01-120L06
Chromosome6 (Build37)
Map Location 73,957,016 - 74,085,702
singlet/doubletdoublet
Overlap genenone
Upstream geneDnahc6, Suclg1, Olfr210-ps1, 4931417E11Rik, LOC100043338
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120L06.bB6Ng01-120L06.g
ACCDH924579DH924580
length1,002937
definitionDH924579|Mus musculus domesticus DNA, BAC clone: B6Ng01-120L06, 5' end.DH924580|Mus musculus domesticus DNA, BAC clone: B6Ng01-120L06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,957,016 - 73,958,010)(74,084,751 - 74,085,702)
sequence
gaattctgcaacatgtttcatattatgatgaaattaaagtgttactgaga
tcacagatctctacagatctctatcccttctgtggggaagagaaggaaaa
tctccagctagtaataagcatcttttatggatgctatgtgttggcaggga
cgtgaggatagaaatgtttcaattctcagtttggcaaactggggagtaaa
taagccttgtagctcctttaagcacaggttcaggactgtcatgatttgtg
tgtacagtgttggaacacttggccaccagctagtgctgtttttcgagatt
gtcaggcctttaagacatcaaaaatcactgaagaaaattggtcaataggt
tttgactgtgagattttatagggaggtccttcttgtcctttctctgctta
tttatagattcaattgagccagatagctgatgcctctgttgttttgtctt
tcccagtttgatggatcttacctgctagaactgtaatgcaaaattacttc
ttcttcttcttcttcttcttcttcttcttcttcttcttcttcttcttctt
cttcttcttcttcttcttcttcttcttcttcttcttcttctcttacattg
tttcttggtaggtattcaagtacagtaacaggaaaagtgaataacacagt
tgtaaaaggcaaattatgaagaaaacataactctttcaccaaaatttggg
gaaaagttttattaaaaaaaactttcaagttagattttttattggatatt
tttctttatttacattttcaaatgttatcccctgttcaggtttctcccct
cctataaatcccctatcccagactccatctcccctgcttctatgagggtg
ttactctacctacccacacttcttctacctccctgccctcattcccccta
ctatctattgagcctcataggacccagtacttctcctccccatattgcct
gacaaggccatcctctgctataaatgctgcttggagccatgtgtactcct
tg
gaattcagtggttcaaaaactaaacaaacgttcaacaataacaacaacag
caacaacaacaaaaacatagatatgaggatttgtagaaagagatgagtgt
aaacagaggtgggaaggattttagagactgtgatgtgtgagagatatcag
aatatatatatatatatatatatatatatatatatatatatatatatata
tatatatatatatacatatattatatatatatatataaactttatatata
tatatggttagaattatcaaaagttacaaacttacatagtttataaatgc
aaacataatacaaatattttaaatgagctgaaataccttccatggtatca
tcaaacagcaacctagcagccacatcactaacttgtctcaaggcagaggc
tacagccacacagaagggcaagtataagtggcctctctgtttacaagcca
cagatctgctgacacaaagaggtaatttaggaataatgaacaccccttca
aggtacacagtgaatcttctgtaaattcttccctgtaagttttctcatct
atcaaatagaagagaagatttttcaccctatctgctggaaattgctgccg
agtggatatattgattcagtgggccatttaatggggtaggtgtctattat
attttaccacattggtaaatggggtttatttaatcctattctcagtgtaa
aaagtttcagtgtggtaaaatctgcaagacagatgtgcagtaatgtgctc
ttttatggaattactacgagaataaaacaaacaagatgctcaccttaaag
ctaaatggctgagaagtttctacttaaatgatttggaagaagcttgtgac
aagctaagttatttacccctgtaaaaatagcttctccccaaaccattatt
tccctatgccaaaatcatttgctttaagcataaaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_73957016_73958010
seq2: B6Ng01-120L06.b_49_1050

seq1  GAATTCTGCAACATGTTTCATATTATGATGAAATTAAAGTGTTACTGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCAACATGTTTCATATTATGATGAAATTAAAGTGTTACTGAGA  50

seq1  TCACAGATCTCTACAGATCTCTATCCCTTCTGTGGGGAAGAGAAGGAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGATCTCTACAGATCTCTATCCCTTCTGTGGGGAAGAGAAGGAAAA  100

seq1  TCTCCAGCTAGTAATAAGCATCTTTTATGGATGCTATGTGTTGGCAGGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGCTAGTAATAAGCATCTTTTATGGATGCTATGTGTTGGCAGGGA  150

seq1  CGTGAGGATAGAAATGTTTCAATTCTCAGTTTGGCAAACTGGGGAGTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGAGGATAGAAATGTTTCAATTCTCAGTTTGGCAAACTGGGGAGTAAA  200

seq1  TAAGCCTTGTAGCTCCTTTAAGCACAGGTTCAGGACTGTCATGATTTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCTTGTAGCTCCTTTAAGCACAGGTTCAGGACTGTCATGATTTGTG  250

seq1  TGTACAGTGTTGGAACACTTGGCCACCAGCTAGTGCTGTTTTTCGAGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACAGTGTTGGAACACTTGGCCACCAGCTAGTGCTGTTTTTCGAGATT  300

seq1  GTCAGGCCTTTAAGACATCAAAAATCACTGAAGAAAATTGGTCAATAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGCCTTTAAGACATCAAAAATCACTGAAGAAAATTGGTCAATAGGT  350

seq1  TTTGACTGTGAGATTTTATAGGGAGGTCCTTCTTGTCCTTTCTCTGCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTGTGAGATTTTATAGGGAGGTCCTTCTTGTCCTTTCTCTGCTTA  400

seq1  TTTATAGATTCAATTGAGCCAGATAGCTGATGCCTCTGTTGTTTTGTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAGATTCAATTGAGCCAGATAGCTGATGCCTCTGTTGTTTTGTCTT  450

seq1  TCCCAGTTTGATGGATCTTACCTGCTAGAACTGTAATGCAAAATTACTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAGTTTGATGGATCTTACCTGCTAGAACTGTAATGCAAAATTACTTC  500

seq1  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT  550

seq1  CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTACATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTCTTACATTG  600

seq1  TTTCTTGGTAGGTATTCAAGTACAGTAACAGGAAAAGTGAATAACACAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGGTAGGTATTCAAGTACAGTAACAGGAAAAGTGAATAACACAGT  650

seq1  TGTAAAAGGCAAATTATGAAGAAAACATAACTC-TTCACCAAAATTTGGG  699
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TGTAAAAGGCAAATTATGAAGAAAACATAACTCTTTCACCAAAATTTGGG  700

seq1  GAAAAG-TTTATTAAAAAAAAC-TTCAAGTTAGATTTTTTATTGGATA-T  746
      |||||| ||||||||||||||| ||||||||||||||||||||||||| |
seq2  GAAAAGTTTTATTAAAAAAAACTTTCAAGTTAGATTTTTTATTGGATATT  750

seq1  TTTCTTTATTTACA-TTTCAAATGTTATCCCCTGTTCAGGTTTCTCCCCT  795
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTTCTTTATTTACATTTTCAAATGTTATCCCCTGTTCAGGTTTCTCCCCT  800

seq1  CCTATAAATCCCCTATCCCAGACTCCATC-CCCCTGCTTCTATGAGGGTG  844
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CCTATAAATCCCCTATCCCAGACTCCATCTCCCCTGCTTCTATGAGGGTG  850

seq1  TTACTCTACCTACCCACAC-TCTCCTACCTCCCTGCCCTCAATTCCCCTA  893
      ||||||||||||||||||| ||| ||||||||||||||||| | ||||||
seq2  TTACTCTACCTACCCACACTTCTTCTACCTCCCTGCCCTCATTCCCCCTA  900

seq1  CTATCTATTGAGCCTTCATAGGACCAAGTACTTCTCCTCCCATTATTGCC  943
      |||||||||||||| |||||||||| |||||||||||||||  |||||||
seq2  CTATCTATTGAGCC-TCATAGGACCCAGTACTTCTCCTCCCCATATTGCC  949

seq1  TGACAAGGCCATCCTCTGCTACAAATGCTGC-TGGAGCCATGTGTACTCC  992
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  TGACAAGGCCATCCTCTGCTATAAATGCTGCTTGGAGCCATGTGTACTCC  999

seq1  TTG  995
      |||
seq2  TTG  1002

seq1: chr6_74084751_74085702
seq2: B6Ng01-120L06.g_66_1002 (reverse)

seq1  ATTTTTATGTACTTAAAAGCAAATGATTTTGACATAAGGAAAATAATTGT  50
      |||||||||  ||| |||||||||||||||| ||| ||| ||||||| ||
seq2  ATTTTTATG--CTT-AAAGCAAATGATTTTGGCAT-AGGGAAATAATGGT  46

seq1  TTAGGGGAGAAGCTATATTTACAGGGGTTAAATAACTTAGCTTGTCAACA  100
      || ||||||||||||| |||||||||| |||||||||||||||||| |||
seq2  TT-GGGGAGAAGCTATTTTTACAGGGG-TAAATAACTTAGCTTGTC-ACA  93

seq1  GGCTTCTTCCAAAATACATTTTAAGTAGAAAACTTCTCAAGCAATTTATG  150
       ||||||||||||  |   ||||||||| ||||||||| ||| ||||| |
seq2  AGCTTCTTCCAAATCA---TTTAAGTAG-AAACTTCTC-AGCCATTTA-G  137

seq1  CTTTAAGGTGAGCATCTTTGTTTGGTTTTTATTCTCTGTAGTAATTCCAT  200
      |||||||||||||||| |||||||  |||||||||| |||||||||||| 
seq2  CTTTAAGGTGAGCATC-TTGTTTG--TTTTATTCTC-GTAGTAATTCCA-  182

seq1  TAAAAGAGCACAATTTACTGCACATCTGTCTTTGCAGATTTTATCAACAC  250
      ||||||||||||  |||||||||||||||| |||||||||||| | ||||
seq2  TAAAAGAGCACA--TTACTGCACATCTGTC-TTGCAGATTTTA-CCACAC  228

seq1  TGAAACCTTTTACACTGAGAATAGGATTAAATAAACCCCATTTACCAATG  300
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTTTTTACACTGAGAATAGGATTAAATAAACCCCATTTACCAATG  278

seq1  TGGTAAAATATAATAGACACCTACCCCATTAAATGGCCCACTGAATCAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTAAAATATAATAGACACCTACCCCATTAAATGGCCCACTGAATCAAT  328

seq1  ATATCCACTCGGCAGCAATTTCCAGCAGATAGGGTG-AAAATCTTCTCTT  399
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATATCCACTCGGCAGCAATTTCCAGCAGATAGGGTGAAAAATCTTCTCTT  378

seq1  CTATTTGATAGATGAGAAAACTTACAGGGAAGAATTTACAGAAGATTCAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGATAGATGAGAAAACTTACAGGGAAGAATTTACAGAAGATTCAC  428

seq1  TGTGTACCTTGAAGGGGTGTTCATTATTCCTAAATTACCTCTTCGTGTCA  499
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TGTGTACCTTGAAGGGGTGTTCATTATTCCTAAATTACCTCTTTGTGTCA  478

seq1  GCAGATCTGTGGCTTGTAAACAGAGAGGCCACTTATACTTGCCCTTCTGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATCTGTGGCTTGTAAACAGAGAGGCCACTTATACTTGCCCTTCTGT  528

seq1  GTGGCTGTAGACTCTGCCTTGAGACAAGTTAGTGATGTGGCTGCTAGGTT  599
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTGTAGCCTCTGCCTTGAGACAAGTTAGTGATGTGGCTGCTAGGTT  578

seq1  GCTGTTTGATGATACCATGGAAGGTATTTCAGCTCATTTAAAATATTTGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTTGATGATACCATGGAAGGTATTTCAGCTCATTTAAAATATTTGT  628

seq1  ATTATGTTTGCATTTTTAAGCTATGTAAGTTTGTAACTTTTGATAATTCT  699
      ||||||||||||||| ||| ||||||||||||||||||||||||||||||
seq2  ATTATGTTTGCATTTATAAACTATGTAAGTTTGTAACTTTTGATAATTCT  678

seq1  AACCATATATATATATAAAGTTTATATATATATATATAATATATG-----  744
      |||||||||||||||||||||||||||||||||||||||||||||     
seq2  AACCATATATATATATAAAGTTTATATATATATATATAATATATGTATAT  728

seq1  -TATATATATATGTATATATATATATATATATATATATATATATATATAT  793
       ||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATATATATATATATATATATATATATATATATATATATATATATATATAT  778

seq1  ATATATATTCTGATATCTCTCACACATCACAGTCTCTAAAATCCTTCCCA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATTCTGATATCTCTCACACATCACAGTCTCTAAAATCCTTCCCA  828

seq1  CCTCTGTTTACACTCATCTCTTTCTACAAATCCTCATATCTATGTTTTTG  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTTTACACTCATCTCTTTCTACAAATCCTCATATCTATGTTTTTG  878

seq1  TTGTTGTTGCTGTTGTTGTTATTGTTGAACGTTTGTTTAGTTTTTGAACC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTTGCTGTTGTTGTTATTGTTGAACGTTTGTTTAGTTTTTGAACC  928

seq1  ACTGAATTC  952
      |||||||||
seq2  ACTGAATTC  937