BAC Information

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BAC

Clone NameB6Ng01-120L07
Chromosome6 (Build37)
Map Location 18,835,441 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-120L07.bB6Ng01-120L07.g
ACCDH924581DH924582
length9431,188
definitionDH924581|Mus musculus domesticus DNA, BAC clone: B6Ng01-120L07, 5' end.DH924582|Mus musculus domesticus DNA, BAC clone: B6Ng01-120L07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaattgttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcaattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggtttagctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtctctataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctttt
atccttgagaagactttttgctatcctaggttttttgttattcaagatga
atttgcaaattgctccttctaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgccagatctttccatcttctgagat
cttcttaatttctttcttcagagacttgaagtttttatcatacagatctt
tcacttccttagttagagtcacgccgagatattttatattatt

gaattctcacctgaggaatacagaatggctgagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatgtctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctggtc
atatatccagaaaatgttccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctagtaaaaagaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgattgaggtaacccaatcacaaa
agaactcacacaatatgtactcactgataagtggatattagcccagaaat
ttagaatacccaagatataagatacaatttgctaaacacatgaaactcaa
gaagaatgaagaccaaagtgtggtcactttgccccttcttagaattggga
acaaaatacccatggaaggagttacagagacaaagtttggagctgagacg
aaacgatggaccatctagatactgccatatccggggatccatcccataat
cagcttccaaacgctgacaccattgcataatactagcaagattttgccca
aaggacccagatatggctgtctcttgtgaagactatgccggggcctgaca
acacagaagtggatgctcacagttcagctattggatgggatcacagggcc
tccaatggaggagctagggaaagtactcaaggagctgaagggatctgcaa
tatggacacatatgaactactattacccccccctccgcctcgagcttcgg
tgttctagctgctacaaattaaagaatgtctatgggcatcaggggaagaa
ggcctattggtgtgctacttaatgctcgatcaggggacttcagggcaaga
atgagtagtgggggagaggctatctgggtgacatctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835441_18835968
seq2: B6Ng01-120L07.b_45_572 (reverse)

seq1  CCCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAG  50
      |||||| |||||||||||||||||||||||||||||||| ||||||||||
seq2  CCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTTGACAAGGGAG  50

seq1  CTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGG  100
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CT-AAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGG  99

seq1  CACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATC  150
      ||||||||||||||||| |||||||||||| |||| ||||||||||||||
seq2  CACAACTGGTTGTTATCATGTAGAAGAATGCGAATTGATCCATACTTATC  149

seq1  TCCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC  199

seq1  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  249

seq1  ATGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGT  299
      ||||||| ||||||| | ||||||||||||||||||||||| ||||||||
seq2  ATGGGCACAGGGGAACAATTCCTGAACAGAACAGCAATGGCTTGTGCTGT  299

seq1  GAGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCA  349
       || | |||||| |||||||||||||||||||||||||||||||||||||
seq2  AAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCA  349

seq1  AGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAA  399

seq1  AGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATA  449

seq1  TAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATA  499
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAA  499

seq1  AATGGGGCTCAGAACTGAACAAAGAATTC  528
      |||||||||||||||||||||||||||||
seq2  AATGGGGCTCAGAACTGAACAAAGAATTC  528


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