BAC Information

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BAC

Clone NameB6Ng01-121C13
Chromosome6 (Build37)8 (Build37)
Map Location 110,929,202 - 110,930,459125,443,423 - 125,444,224
singlet/doubletsingletsinglet
Overlap geneGrm7
Upstream genenone
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-121C13.bB6Ng01-121C13.g
ACCDH924912DH924913
length1,2321,067
definitionDH924912|Mus musculus domesticus DNA, BAC clone: B6Ng01-121C13, 5' end.DH924913|Mus musculus domesticus DNA, BAC clone: B6Ng01-121C13, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(110,929,202 - 110,930,459)(125,443,423 - 125,444,224)
sequence
gaattcatctctcccctacattaactctcctcagggacactgtcctctct
agtcatacctaatttgatgacatgaatacaagtattttcttccgtgaagc
caatcattctacactgtatgttatcatactgtgtgcgttttgtataacta
aatctatttccttgcaaatctgagcaattcactatgagtaaaggaaaagg
gctgtagagactggtttttttactaaacactgacactgaagtggtaacca
aatctctctgatttcagtttttgttatatctgaaactagagaagaaatga
agcttgccaagtgattggtaatatcaaccactgttcctagaatgtagtat
gtgcctggtgaatagtcattagaggtaagagggcagttagtggcactcca
gtagctgtcacctgctgttcgaacatgattttgattcaaaactaatctct
tggaggttttccatgtttttaccaccctgttttttctgtttccccaccag
ctctcatagaactccaagttcatagagtactcaagacagtgcaaactcct
tctgatcaatggtcagcggtagaaatgacatttgttagagagttctttca
aagagacaacaaatatagatatttttcttctcatccagataaaagaattg
gatttaaacagtattgctccaaattcctgttaaggcattggcgatattca
tgcattggcgatattcatgctggtcttatttgctggcatcttcagggata
gggaagctttggggaatgatgtccttcaatgttttaatgttgcaaagaca
ggaaaaaacgaaaccaaaccacagtcatagacatgatcatatgcttataa
gtattggtgtaggatgctgaaatttaattctcttggaccctggcttgaga
aaaatgaatgatcaggaatttttgtggccataactctgagaatgtgcaca
aacacacacacacacacacacacacacacacacacacacacactcacacg
agttcccagaaaacgagcaaacattgtgcttccctgcatttacatcagga
ccataaatgatcccataccaaattctgggttgattgactctgtaagagtg
tctagacagtggaagaacctatacaggttatggataagaatattccttaa
atctcatcaattaaaactaggttggcaattctgaatgataacctaattgc
aaggaaaggtagaaagtctaccacacttggag
gaattcaacatattgcctataatcatagagctataattgggtgtaaatta
tttaagtgattgatcagtcttattaggtgaatgtgtatgaattgtgctga
atgaggactgatttttcttaagtttaagtatcagaaaaatgcttaaaagg
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatatatatatatatatatatatatatatatatatatatatatatat
atatatttatatctggatatatatatataagacaccctctatcatcagca
tactattgctatttcttcccctgaaacaatgactaaatccatataaatgt
atgtggatttctgactaaaaatgaacccctctcccccaactagtggtttg
tgacgaagtgaacaaagcacagcccgtggaagttctcatggggctgggaa
cccaagggcacaagacaggggaggctctggccaagccccactgtcttgga
agcaagcccagatataacgggtctaaatccggtaccccggactatatcca
catccaccatcagccaaggatagataggctgtcagccatttctgaacacc
ttattcataggagctgcagccatacaaaaaagcagagctctttaaggggc
acacaaagccaggacagtgtgcagaaaactcaggacgtcaaactccaaaa
tgatgctcatgcctaggaatcccttgggattacagacacaagagaagagt
catagaatagcaagacagaaacaagtccaagtgcacagtctagcaagtca
gtgagaagctacaaattcataaattaacaacagcctggccgagatggtga
gcactttaataccagcgctccagaggcagatgcaggaggatccctctgag
tcaaagcaagttcagtctacagacaagtttcatgacagttacacatagag
ctgtcacacaaattacaaatgctaggaaatgactgagtatggaagtcacc
ctctactacagacatcgaacatcaacaaataggactgcctgactgggggc
taaaggacgaatagcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_110929202_110930459
seq2: B6Ng01-121C13.b_45_1276

seq1  GAATTCATCTCTCCCCTACATTAACTCTCCTCAGGGACACTGTCCTCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTCTCCCCTACATTAACTCTCCTCAGGGACACTGTCCTCTCT  50

seq1  AGTCATACCTAATTTGATGACATGAATACAAGTATTTTCTTCCGTGAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATACCTAATTTGATGACATGAATACAAGTATTTTCTTCCGTGAAGC  100

seq1  CAATCATTCTACACTGTATGTTATCATACTGTGTGCGTTTTGTATAACTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATTCTACACTGTATGTTATCATACTGTGTGCGTTTTGTATAACTA  150

seq1  AATCTATTTCCTTGCAAATCTGAGCAATTCACTATGAGTAAAGGAAAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTATTTCCTTGCAAATCTGAGCAATTCACTATGAGTAAAGGAAAAGG  200

seq1  GCTGTAGAGACTGGTTTTTTTACTAAACACTGACACTGAAGTGGTAACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGAGACTGGTTTTTTTACTAAACACTGACACTGAAGTGGTAACCA  250

seq1  AATCTCTCTGATTTCAGTTTTTGTTATATCTGAAACTAGAGAAGAAATGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTCTGATTTCAGTTTTTGTTATATCTGAAACTAGAGAAGAAATGA  300

seq1  AGCTTGCCAAGTGATTGGTAATATCAACCACTGTTCCTAGAATGTAGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGCCAAGTGATTGGTAATATCAACCACTGTTCCTAGAATGTAGTAT  350

seq1  GTGCCTGGTGAATAGTCATTAGAGGTAAGAGGGCAGTTAGTGGCACTCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTGGTGAATAGTCATTAGAGGTAAGAGGGCAGTTAGTGGCACTCCA  400

seq1  GTAGCTGTCACCTGCTGTTCGAACATGATTTTGATTCAAAACTAATCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTGTCACCTGCTGTTCGAACATGATTTTGATTCAAAACTAATCTCT  450

seq1  TGGAGGTTTTCCATGTTTTTACCACCCTGTTTTTTCTGTTTCCCCACCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTTTTCCATGTTTTTACCACCCTGTTTTTTCTGTTTCCCCACCAG  500

seq1  CTCTCATAGAACTCCAAGTTCATAGAGTACTCAAGACAGTGCAAACTCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCATAGAACTCCAAGTTCATAGAGTACTCAAGACAGTGCAAACTCCT  550

seq1  TCTGATCAATGGTCAGCGGTAGAAATGACATTTGTTAGAGAGTTCTTTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATCAATGGTCAGCGGTAGAAATGACATTTGTTAGAGAGTTCTTTCA  600

seq1  AAGAGACAACAAATATAGATATTTTTCTTCTCATCCAGATAAAAGAATTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGACAACAAATATAGATATTTTTCTTCTCATCCAGATAAAAGAATTG  650

seq1  GATTTAAACAGTATTGCTCCAAATTCCTGTTAAGGCATTGGCGATATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTAAACAGTATTGCTCCAAATTCCTGTTAAGGCATTGGCGATATTCA  700

seq1  TGCATTGGCGATATTCATGCTGGTCTTATTTGCTGGCATCTTCAGGGATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTGGCGATATTCATGCTGGTCTTATTTGCTGGCATCTTCAGGGATA  750

seq1  GGGAAGCTTTGGGGAATGATGTCCTTCAATGTTTTAATGTTGCAAAGACA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGCTTTGGGGAATGATGTCCTTCAATGTTTTAATGTTGCAAAGACA  800

seq1  GGAAAAAACGAAACCAAACCACAGTCATAGACATGATCATATGCTTATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAAAACGAAACCAAACCACAGTCATAGACATGATCATATGCTTATAA  850

seq1  GTATTGGTGTAGGATGCTGAAATTTAATTCTCTTGGACCCTGGCTTGAGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGGTGTAGGATGCTGAAATTTAATTCTCTTGGACCCTGGCTTGAGA  900

seq1  AAAATGAATGATCAGGAATTTTTGTGGCCATAACTCTGAGAATGTGCACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAATGATCAGGAATTTTTGTGGCCATAACTCTGAGAATGTGCACA  950

seq1  AACACACACACACACACACACACACACACACACACACACACACACACACG  1000
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AACACACACACACACACACACACACACACACACACACACACACTCACACG  1000

seq1  AGTTCCCAAGAAAAAGGAGCAAAACATTGTGCTTCCCTGCATTTACATCA  1050
      ||||||||   |||| |||| |||||||||||||||||||||||||||||
seq2  AGTTCCCA--GAAAACGAGC-AAACATTGTGCTTCCCTGCATTTACATCA  1047

seq1  GGAACCATAAATGATCCCATACCAAATTCTGGGTTGAATTGACTCTGT-A  1099
      || ||||||||||||||||||||||||||||||||| ||||||||||| |
seq2  GG-ACCATAAATGATCCCATACCAAATTCTGGGTTG-ATTGACTCTGTAA  1095

seq1  GAGTTGTCTAGACAAGTGGAAGAACATATACAAGTTATAGTGATTAAAGA  1149
      ||| ||||||||| ||||||||||| |||||| |||||   |||  ||||
seq2  GAG-TGTCTAGAC-AGTGGAAGAACCTATACAGGTTAT--GGAT--AAGA  1139

seq1  TATAATTCCCTTAAAATCTCCATTCAATATTAAAACTAGTGTTGCATATT  1199
       || |||||  | |||||||   |||  ||||||||||| ||||   |||
seq2  -AT-ATTCC--TTAAATCTC--ATCA--ATTAAAACTAG-GTTGGCAATT  1180

seq1  CATGAGTTGATTAGACCTAATTTGCAAAGGAAGAGGGAAGAAAGTCTACC  1249
      | |||  ||||   |||||| |||||| | ||   || ||||||||||||
seq2  C-TGA-ATGAT--AACCTAA-TTGCAAGGAAA---GGTAGAAAGTCTACC  1222

seq1  ACAC-TGGAG  1258
      |||| |||||
seq2  ACACTTGGAG  1232

seq1: chr8_125443423_125444224
seq2: B6Ng01-121C13.g_346_1134

seq1  AAGACACCCTCTATCATCAGCATACTATTGCAGTTTCTTCCCCTGAAACA  50
      |||||||||||||||||||||||||||||||  |||||||||||||||||
seq2  AAGACACCCTCTATCATCAGCATACTATTGCTATTTCTTCCCCTGAAACA  50

seq1  ATGACAGAATCCACAAAACTGTAGGTGGCTTTCTGACAGAAAAAGAACCC  100
      |||||  |||||| | || |||| |||| ||||||||  |||| ||||||
seq2  ATGACTAAATCCATATAAATGTATGTGGATTTCTGACTAAAAATGAACCC  100

seq1  CTCGCCCCCAACTAGTGGTTTGTGACGAAGTGAACAAAGCACAGCCCGTG  150
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCCCAACTAGTGGTTTGTGACGAAGTGAACAAAGCACAGCCCGTG  150

seq1  GAAGTTCTCATGGGGCTGGGAACCCATGGGCACAAGACAGGGGAGGCTCT  200
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GAAGTTCTCATGGGGCTGGGAACCCAAGGGCACAAGACAGGGGAGGCTCT  200

seq1  GGCCAAGCCCCACTGTCTTGGAAGCAAGCCCAGATATAACGGGTCTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGCCCCACTGTCTTGGAAGCAAGCCCAGATATAACGGGTCTAAAT  250

seq1  CCGGTACCCCGGACTATATCCACATCCACCATCAGCCAAGGATAGATAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGTACCCCGGACTATATCCACATCCACCATCAGCCAAGGATAGATAGG  300

seq1  CTGTCAGCCA-TTCTGAACACCTTATTCATAGGAGCTGCAGCCATACAAA  349
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTGTCAGCCATTTCTGAACACCTTATTCATAGGAGCTGCAGCCATACAAA  350

seq1  AAAGCAGAGCTC-TTAAGGGGCACACAAAGCCAGGACAGTGTGCAGAAAA  398
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGAGCTCTTTAAGGGGCACACAAAGCCAGGACAGTGTGCAGAAAA  400

seq1  CTCAGGACGTCAAACTCCAAAATGATGCTCATGCCTAGGAATCCC-TGGG  447
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CTCAGGACGTCAAACTCCAAAATGATGCTCATGCCTAGGAATCCCTTGGG  450

seq1  ATTACAGACACAAGAGAAGAGCCATAGAAAAGCAAGAACAGAAACAAGTC  497
      ||||||||||||||||||||| ||||||| |||||| |||||||||||||
seq2  ATTACAGACACAAGAGAAGAGTCATAGAATAGCAAG-ACAGAAACAAGTC  499

seq1  CAAGTGCACAGTCTAGCAAGTCAGTGAGAAGCTACAAAATTCATAAATTA  547
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  CAAGTGCACAGTCTAGCAAGTCAGTGAGAAGCTAC-AAATTCATAAATTA  548

seq1  ACAACAGCCTGGCCGAGATGGTGAGCACCTTTAATACCAGCGCTCCAGAG  597
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACAACAGCCTGGCCGAGATGGTGAGCA-CTTTAATACCAGCGCTCCAGAG  597

seq1  GCAGAAGCAGGAGGATCCCTCTGAGTCCAAAGCAAGTCCAGTCTACAGAA  647
      ||||| |||||||||||||||||||| |||||||||| |||||||||| |
seq2  GCAGATGCAGGAGGATCCCTCTGAGT-CAAAGCAAGTTCAGTCTACAG-A  645

seq1  CAAGTTTCAGGACAGTTACACATAGAAGCTGTCAACAACAAAATTAACAA  697
      ||||||||| ||||||||||||||| |||||||    ||| || | ||||
seq2  CAAGTTTCATGACAGTTACACATAG-AGCTGTC----ACACAAATTACAA  690

seq1  ATGCTAGGAAAAGACCTGAGTATTGGAAGTCACCCTCTACTACAGACAAC  747
      ||||||||||| || ||||||| ||||||||||||||||||||||||| |
seq2  ATGCTAGGAAATGA-CTGAGTA-TGGAAGTCACCCTCTACTACAGACATC  738

seq1  AGAACATCAACAAATAGGACTGTCTGACTGGGGGCTACAAAGGACGAATG  797
       ||||||||||||||||||||| |||||||||||||  ||||||||||| 
seq2  -GAACATCAACAAATAGGACTGCCTGACTGGGGGCT--AAAGGACGAAT-  784

seq1  AGCCA  802
      |||||
seq2  AGCCA  789