BAC Information

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BAC

Clone NameB6Ng01-123J11
Chromosome6 (Build37)
Map Location 18,835,441 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-123J11.bB6Ng01-123J11.g
ACCDH926714DH926715
length9871,228
definitionDH926714|Mus musculus domesticus DNA, BAC clone: B6Ng01-123J11, 5' end.DH926715|Mus musculus domesticus DNA, BAC clone: B6Ng01-123J11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccatttttaatggggttatttgattt
tctgaagtccaccttcttgagttctttatatatgttggatattagtcccc
tatctgatttaggataggtaaagatcctttcccaatctgttggtggtctt
tttgtcttattgacggtgtcttttgccttgcagaaactttggagtttcat
taggtcccatttgtcaattctcgatcttacagcacaagccattgctgttc
tgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccact
ttctcctctataagtttcagtgtctctggttttatgtgaagttccttgat
ccacttagatttgaccttagtacaaggagataagtatggatcgattcgca
ttcttctacacgataacaaccagttgtaccagcaccaattgttgaaaatg
ctgtctttcttccactggatggttttagctcccttgtcgaagatcaagtg
accataggtgtgtgggttcatttctgggtcttcaattctattccattggt
ctacttgtctgtctctataccagtaccatgcagtttttatcacaattgct
ctgtagtaaagctttaggtctggcatggtgattccgccagaagttctttt
atccttgagaagactttttgctatcctaggttttttgttatttcagacaa
atttgcaaattgctccttcaaattcgttgaagaattgagttggaattttg
atggggattgcattgaatctgtagattgcttttggcaagatagccatttt
tacaatgttgatcctgccaatccatgagcatgggagatctttccatcttc
tgagatcttctttaatttctttcttcagagattgaagttttatcatacag
atctttcacctccttagtagagtcacgccaagatattttatattatttgt
gactattgagaggtgtgtttccctattcttctcagcc

gaattctcacactagcaacttaacagcacatcagaaactctagaacaaat
agaagcaaatgtacccaagagcatggatggcagaaaacaatcaaactgag
ggctgaaatcaataaaatagaaagaaagagtgagagagagagagagagag
agagagagagagagaaatacaaagaatcaatacaagaaagaattggagaa
aaatcagtaaaatagaaaagcctttatctttattaagtaaaaggcaaaga
gaatatccaaatcaacaaaaccagtaacaaaaagcagtacatagcaacca
aaagcaaggaaatccaatgaactataaagtcatatttcaaaaacctatac
tccaaaaaactggaaaatttaaaacaaatggagaattttctcgatagatg
ccacataccaaagttaaatcaagatcatgtaaacaacttaaattggtcta
tttaatccctcagaaaatagaaatagttattcaaagactcccaaacagaa
aaagcccagaggcatagttttagtgaagaattctatgagactttgaaaga
agacctaaggccaatactccttaaattattccacaaaatagaaacagaaa
aaacattgccaaatttatatgaagtcagatttaccctgatatccaaacaa
catgaagatttctcaaagagaattatataccaatcatcaacttgatgcaa
atgtattcaataaaatgcttgaaatctgaatataagaacacatcaaaagg
aacatccactatgatcaaacaggcttcattccagaaatgcaggggatgga
tcagcacacaaaatttgtcaacataatttaccatataaataatataaaag
aagaaaaacccagatgattataccattagatgctcaaacaacattttaac
aagcccaaacccttcatgacaaatgccttggagagatcaggatacaaggg
acaaacctaaacataataaagcaattcaaagtaagtctataggcaacatc
aattaatggagagaaagtaatcaatcactaaacagagggaaaggtgtcag
tcttcatatctatcaataatacctcgaagtttagctaagcaataaaacgc
ttaaatgtaagtagaggtgacctcaaattgaagccaggatctcagattaa
cataatgacttcaaatgaccaaggattcctcgatcgtataaaactcggta
ggagagttgagtatgataattaccctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835441_18835968
seq2: B6Ng01-123J11.b_44_571 (reverse)

seq1  CCCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAG  50
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAG  50

seq1  CTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGG  100

seq1  CACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATC  150
       |||||||||||||||| |||||||||||| |||||||||||||||||||
seq2  TACAACTGGTTGTTATCGTGTAGAAGAATGCGAATCGATCCATACTTATC  150

seq1  TCCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC  200

seq1  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  250

seq1  ATGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGT  299
      ||||||| ||||||||| ||||||||||||||||||||||| ||||||||
seq2  ATGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGT  300

seq1  GAGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCA  349
       || | |||||| |||||||||||||||||||||||||||||||||||||
seq2  AAGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCA  350

seq1  AGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAA  400

seq1  AGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATA  450

seq1  TAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATA  499
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAA-A  499

seq1  AATGGGGCTCAGAACTGAACAAAGAATTC  528
      |||||||||||||||||||||||||||||
seq2  AATGGGGCTCAGAACTGAACAAAGAATTC  528


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