BAC Information

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BAC

Clone NameB6Ng01-124A18
Chromosome6 (Build37)X (Build37)
Map Location 18,835,442 - 18,835,96880,333,432 - 80,334,418
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124A18.bB6Ng01-124A18.g
ACCDH927055DH927056
length955988
definitionDH927055|Mus musculus domesticus DNA, BAC clone: B6Ng01-124A18, 5' end.DH927056|Mus musculus domesticus DNA, BAC clone: B6Ng01-124A18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(80,333,432 - 80,334,418)
sequence
gaattctttgttcagttctgagccccattttttaatggggttgtttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ctttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tccatttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccatttgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttaccacaattgc
tctgtagtaaagctttaggtcagtcatggtgattccaccagaggttcatt
tatccttgagaagagtttttgctatcctaggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttactatattgatcctgccaatccatgagcatgggcgatctttccatctt
ctgagatcttctttaatttctttcttcagagacttgaagtttttatcata
cagatctttcacttccttagttagagtcacgccgagatatttatattatt
tgtga
gaattcctgaacacggtgtaatttacaaagataataaatgaacatccttt
ctactatctactacacaaattttgtcaataatatccagtctgaggttttg
tcatggaacctgctatgaaaagagctgaagtttaccttacatttcttttt
atcaattcacaaataagtaaagaaatgaataaaagaattctcatagccaa
acctatgaatttttttttcttgttttgtaaagcattgtaaaacagaatct
tgcaaacaggtcatttaacttagttttagatgggacgcatgaattttgaa
gtcattttaatcttacatttaatatttccataacaaaacagtaattcagt
caaagcattgaaatttcaaaagaaaatgcaaatacagtccagagactaaa
gttcgaaattttttgaaaatggtatcaagtcaagatcagttttcagttag
caattttttccatctttcaaaacaaatggtaatgagcaactctagtacat
taaagacattattattcagtggcatttgttaagacatagatccgttttac
tcagggatataatcttgagtataggaatcactgaaacaggctcataagac
catggatagaaactcagcctgactgtaaaaaaaaaaaaaaaaaaacggga
tggagattctaaacgaaattaacaagattcaagtgggaacaaaaacaccc
ttggaaggagttacagagacaaagtttggagctgagatgaaaggatggac
catgtagagactgccttatccagggatccacccaataatcagcatccaaa
cgctgacaccattgcatacactagcagattttatcgaaagacccagattg
tagctgtctctgtggagactatgccgggcctagcaaacacagaagtggat
gcccacagtcagctaatggatggatcacaggcctcccaatggaggagcta
gagaaaggtacccatggagctaaagggtcctgcaactc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-124A18.b_42_569 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAAATGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||| |||||||| |||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAATGGATCAAAGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAGAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||||||||||||||||| ||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAACAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chrX_80333432_80334418
seq2: B6Ng01-124A18.g_66_1053 (reverse)

seq1  GAGTTGCAGATCCCTTTAGCTCCTTGGGTA-CTTTCTCTAGCTCCTCCAT  49
      |||||||||  |||||||||||| |||||| |||||||||||||||||||
seq2  GAGTTGCAGGACCCTTTAGCTCCATGGGTACCTTTCTCTAGCTCCTCCAT  50

seq1  TGGGAGCCCTGTGATCCATCCATTAGCTGACTGTGGGCATCCACTTCTGT  99
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGCCTGTGATCCATCCATTAGCTGACTGTGGGCATCCACTTCTGT  100

seq1  GTTTGCTAGGCCCCGGCATAGTCTCACAAGAGACAGCTAC-ATCTGGGTC  148
      |||||||||| ||||||||||||||   |||||||||||| |||||||| 
seq2  GTTTGCTAGG-CCCGGCATAGTCTCCACAGAGACAGCTACAATCTGGGT-  148

seq1  CTTTCGATAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGATGC  198
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTTTCGATAAAATC-TGCTAGTGTATGCAATGGTGTCAGCGTTTGGATGC  197

seq1  TGATTATTGGGTGGATCCCTGGATAAGGCAGTCTCTACATGGTCCATCCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTATTGGGTGGATCCCTGGATAAGGCAGTCTCTACATGGTCCATCCT  247

seq1  TTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAAGGGTG-TTT  297
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTCATCTCAGCTCCAAACTTTGTCTCTGTAACTCCTTCCAAGGGTGTTTT  297

seq1  TGTTCCCACTTGAATCTTGTTAATTTCGTTTAGAATCTCCATCCCG-TTT  346
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TGTTCCCACTTGAATCTTGTTAATTTCGTTTAGAATCTCCATCCCGTTTT  347

seq1  TTTTTTTTTTTTTTTACAGTCAGGCTGAGTTTCTATCCATGGTCTTATGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTACAGTCAGGCTGAGTTTCTATCCATGGTCTTATGA  397

seq1  GCCTGTTTCAGTGATTCCTATACTCAAGATTATATCCCTGAGTAAAACGG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTTTCAGTGATTCCTATACTCAAGATTATATCCCTGAGTAAAACGG  447

seq1  ATCTATGTCTTAACAAATGCCACTGAATAATAATGTCTTTAATGTACTAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGTCTTAACAAATGCCACTGAATAATAATGTCTTTAATGTACTAG  497

seq1  AGTTGCTCATTACCATTTGTTTTGAAAGATGGAAAAAATTGCTAACTGAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCTCATTACCATTTGTTTTGAAAGATGGAAAAAATTGCTAACTGAA  547

seq1  AACTGATCTTGACTTGATACCATTTTCAAAAAATTTCGAACTTTAGTCTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATCTTGACTTGATACCATTTTCAAAAAATTTCGAACTTTAGTCTC  597

seq1  TGGACTGTATTTGCATTTTCTTTTGAAATTTCAATGCTTTGACTGAATTA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTGTATTTGCATTTTCTTTTGAAATTTCAATGCTTTGACTGAATTA  647

seq1  CTGTTTTGTTATGGAAATATTAAATGTAAGATTAAAATGACTTCAAAATT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTGTTATGGAAATATTAAATGTAAGATTAAAATGACTTCAAAATT  697

seq1  CATGCGTCCCATCTAAAACTAAGTTAAATGACCTGTTTGCAAGATTCTGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCGTCCCATCTAAAACTAAGTTAAATGACCTGTTTGCAAGATTCTGT  747

seq1  TTTACAATGCTTTACAAAACAAGAAAAAAAAATTCATAGGTTTGGCTATG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACAATGCTTTACAAAACAAGAAAAAAAAATTCATAGGTTTGGCTATG  797

seq1  AGAATTCTTTTATTCATTTCTTTACTTATTTGTGAATTGATAAAAAGAAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCTTTTATTCATTTCTTTACTTATTTGTGAATTGATAAAAAGAAA  847

seq1  TGTAAGGTAAACTTCAGCTCTTTTCATAGCAGGTTCCATGACAAAACCTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAGGTAAACTTCAGCTCTTTTCATAGCAGGTTCCATGACAAAACCTC  897

seq1  AGACTGGATATTATTGACAAAATTTGTGTAGTAGATAGTAGAAAGGATGT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGATATTATTGACAAAATTTGTGTAGTAGATAGTAGAAAGGATGT  947

seq1  TCATTTATTATCTTTGTAAATTACACCGTGTTCAGGAATTC  987
      |||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTATTATCTTTGTAAATTACACCGTGTTCAGGAATTC  988