BAC Information

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BAC

Clone NameB6Ng01-124I10
Chromosome6 (Build37)
Map Location 75,837,406 - 75,838,591
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143, EG668145
Downstream geneEG546907, LOC100042952, LOC668153, EG668155, LOC100042956, Ctnna2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124I10.bB6Ng01-124I10.g
ACCDH927410DH927411
length1,1811,169
definitionDH927410|Mus musculus domesticus DNA, BAC clone: B6Ng01-124I10, 5' end.DH927411|Mus musculus domesticus DNA, BAC clone: B6Ng01-124I10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaagtgtgtgcagcagaatatatatatatataaagaagatccaac
tttctgcaaagccacatagctggaacaatcacatgctaattgcctaccaa
ttagaaactgtaaaagggatgtcaatgaactctctaaattgctgttattt
tctgttttcattaaggttttaaaattatccttttattctactctccagaa
tttcattatcctcatttttgtctgaaattataactcaaatccaaatgctt
aattaggaaagaagaatgtgaagaatctgacaacttcttttcaatagaaa
atctaactgagcaattcagtccactcaagagcctctactgcacaactttc
ccttaacgatcaacattgttctccctggaggctttgacctcatcagagga
gtgagtccttctgggttggtaactttcttccaattatttaaattttgaaa
ttattttctgtctacagcatttcccttagcagtattcacatgcaaaccaa
tgtatgactcctgaatgtaatcaaaaattaacatacaacaaaggagaaga
aaagaaatcaaaggcagacacacacacacacacacacacaccctgagtct
ataactaattccagcagtttaccctgtattcatttgctctgatatagcta
ccctttccaggaaccctgatttcacatcagttgttgctttattatttttg
caatggctgtggtaaaatagcttggcaaaggcaaattacaggagataagt
tctattttggctcacagtttgtagttttaatccaataatggtagggaaat
catgatagtaaataggagcttgcagcagctggtaacattgaacccatagt
gaaatagcatagtataataaaattattcactcaggtcacctcatcatttt
tatactgtctggggtctcatgccaagtgatgacatcatcttcagtgaata
aatctttctacctcataccttaatcaagatactcactctaccccaaggca
tttctaggagcaccatctttcagttattctagatctcataaaatggacag
tggtaattaaccaccacacacttgtttcccttgacaagctttaaatcagg
ctggtcagccattcttcataacttccccattctaatttctttactcatct
gtctaaaagcatctggatcttgtttaggaga
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaatttcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttatacaaccactctggaaatcagtctggtggttcctta
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgccccactat
gttcatagcagccttatttataatagccttctagaagctagaaagaactg
agatgcccctcaacagaggaatggatacagaaaatgtggtacatttacac
aatggagtactactcagctattaaaaagaatgaatttatgaaattcctag
gcaaatggatggacctggagggcatcatcctgagtgaggtaacacaatca
caaaggaactcacacaatatgtactcactgataagtggatattagcccag
aaacttaggatacccaagatataagatacaatttgctaaacgcatgaaac
tcaagaagaatgaagaccaaagtgtggacactgtgctccatcttagaatt
gggaacaaaacacccatggacggagttacagagaaaaagtttggaatttt
gacgaaaggatggaccatctagagactgccatataaagggatccacccca
taatcatcttcaaacgctgataccatttgcatacactagcaagattttat
cgaaaggaccaggtgtagctgtctctttgtgagactatgcccgggcctta
gcaacatagaagtggatgctcacagtcagctagtggatggatcacagggc
tcccatggaggagctagagaagtacccatgagctaagggatctgcaccct
ttaggtggacaacattattgacttaccattaccaggagctcttgactctt
agcttgcaatatggttcaaagatgggccagtcgccaatcactggaaagag
agccattggacacaacctaatggccagtacaggatataataatggatggt
cgcggcatgggtgggtgcg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_75837406_75838591
seq2: B6Ng01-124I10.b_42_1222

seq1  GAATTCAAGTGTGTGCAGCAGAATATATATATATATAAAGAAGATCCAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGTGTGTGCAGCAGAATATATATATATATAAAGAAGATCCAAC  50

seq1  TTTCTGCAAAGCCACATAGCTGGAACAATCACATGCTAATTGCCTACCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCAAAGCCACATAGCTGGAACAATCACATGCTAATTGCCTACCAA  100

seq1  TTAGAAACTGTAAAAGGGATGTCAATGAACTCTCTAAATTGCTGTTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAACTGTAAAAGGGATGTCAATGAACTCTCTAAATTGCTGTTATTT  150

seq1  TCTGTTTTCATTAAGGTTTTAAAATTATCCTTTTATTCTACTCTCCAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTCATTAAGGTTTTAAAATTATCCTTTTATTCTACTCTCCAGAA  200

seq1  TTTCATTATCCTCATTTTTGTCTGAAATTATAACTCAAATCCAAATGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATTATCCTCATTTTTGTCTGAAATTATAACTCAAATCCAAATGCTT  250

seq1  AATTAGGAAAGAAGAATGTGAAGAATCTGACAACTTCTTTTCAATAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAGGAAAGAAGAATGTGAAGAATCTGACAACTTCTTTTCAATAGAAA  300

seq1  ATCTAACTGAGCAATTCAGTCCACTCAAGAGCCTCTACTGCACAACTTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAACTGAGCAATTCAGTCCACTCAAGAGCCTCTACTGCACAACTTTC  350

seq1  CCTTAACGATCAACATTGTTCTCCCTGGAGGCTTTGACCTCATCAGAGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAACGATCAACATTGTTCTCCCTGGAGGCTTTGACCTCATCAGAGGA  400

seq1  GTGAGTCCTTCTGGGTTGGTAACTTTCTTCCAATTATTTAAATTTTGAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCCTTCTGGGTTGGTAACTTTCTTCCAATTATTTAAATTTTGAAA  450

seq1  TTATTTTCTGTCTACAGCATTTCCCTTAGCAGTATTCACATGCAAACCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTCTGTCTACAGCATTTCCCTTAGCAGTATTCACATGCAAACCAA  500

seq1  TGTATGACTCCTGAATGTAATCAAAAATTAACATACAACAAAGGAGAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGACTCCTGAATGTAATCAAAAATTAACATACAACAAAGGAGAAGA  550

seq1  AAAGAAATCAAAGGCAGACACACACACACACACACACACACCCTGAGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATCAAAGGCAGACACACACACACACACACACACACCCTGAGTCT  600

seq1  ATAACTAATTCCAGCAGTTTACCCTGTATTCATTTGCTCTGATATAGCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTAATTCCAGCAGTTTACCCTGTATTCATTTGCTCTGATATAGCTA  650

seq1  CCCTTTCCAGGAACCCTGATTTCACATCAGTTGTTGCTTTATTATTTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTCCAGGAACCCTGATTTCACATCAGTTGTTGCTTTATTATTTTTG  700

seq1  CAATGGCTGTGGTAAAATAGCTTGGCAAAGGCAAATTACAGGAGATAAGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGGCTGTGGTAAAATAGCTTGGCAAAGGCAAATTACAGGAGATAAGT  750

seq1  TCTATTTTGGCTCACAGTTTGTAGTTTTAATCCAATAATGGTAGGGAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTTGGCTCACAGTTTGTAGTTTTAATCCAATAATGGTAGGGAAAT  800

seq1  CATGATAGTAAATAGGAGCTTGCAGCAGCTGGTAACATTGAACCCATAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATAGTAAATAGGAGCTTGCAGCAGCTGGTAACATTGAACCCATAGT  850

seq1  GAAATAGCATAGTATAATAAAATTATTCACTCAGGTCACCTCATCATTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGCATAGTATAATAAAATTATTCACTCAGGTCACCTCATCATTTT  900

seq1  TATACTGTCTGGGGTCTCATGCCAAGTGATGACATCATCTTCAGTGAATA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTGTCTGGGGTCTCATGCCAAGTGATGACATCATCTTCAGTGAATA  950

seq1  AATCTTTCTACCTCAATACCTTAATCAAGATAACTCACTCTACCCCAAGG  1000
      |||||||||||||| |||||||||||||||| ||||||||||||||||||
seq2  AATCTTTCTACCTC-ATACCTTAATCAAGAT-ACTCACTCTACCCCAAGG  998

seq1  CATTTCTA-GAGCACCATCTTTCAAGTTATTCTAGATCTCATAAAATGGA  1049
      |||||||| |||||||||||||| ||||||||||||||||||||||||||
seq2  CATTTCTAGGAGCACCATCTTTC-AGTTATTCTAGATCTCATAAAATGGA  1047

seq1  CAGTGGTAATTAACCAC--CACACTTGTTTCCCTTGACAAGCTTTAAATC  1097
      |||||||||||||||||  |||||||||||||||||||||||||||||||
seq2  CAGTGGTAATTAACCACCACACACTTGTTTCCCTTGACAAGCTTTAAATC  1097

seq1  AGGCTTGTCAGCATTTCTTCATAAAACTACCCACATTCT-ATTTCTTATC  1146
      ||||| ||||||  ||||||||  |||| ||| |||||| |||||||  |
seq2  AGGCTGGTCAGCCATTCTTCAT--AACTTCCC-CATTCTAATTTCTTTAC  1144

seq1  TCATCTTGTCTTAAAACGCATCCTGATTCTGTTTAGGAGA  1186
      ||||| |||||  ||| |||||  |||  |||||||||||
seq2  TCATC-TGTCT--AAAAGCATCTGGATCTTGTTTAGGAGA  1181