BAC Information

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BAC

Clone NameB6Ng01-124K03
Chromosome6 (Build37)6 (Build37)
Map Location 18,835,448 - 18,835,968111,904,455 - 111,905,580
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-124K03.bB6Ng01-124K03.g
ACCDH927490DH927491
length9191,107
definitionDH927490|Mus musculus domesticus DNA, BAC clone: B6Ng01-124K03, 5' end.DH927491|Mus musculus domesticus DNA, BAC clone: B6Ng01-124K03, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,448 - 18,835,968)(111,904,455 - 111,905,580)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaagataggtaaaaatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggctttttcccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctctttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacttcctta
gaattcatgcttcatcaagcactaaagaaccttctccatgcctttcatgc
cttgacaagtctgtcagcctggctctgcccatgtacatgaagagccaaat
gtgtaaagacacaggtgagcaaaaagaactcttgcttgttctgaaatgac
ggctctaatcactccaattgtgcagctgcttgtgtggcctcataaaggaa
ttcagaatctcatgtccactctggctaggagaagaacaaattcttcctcc
atgctatgtcaagccagagctacccaccaagttgacatgcagtttgtctt
ttcaaatccataggatatttttcaaatgaaccaagaaaaagaggccacgg
gcagaaagcatagctcagtgggtaaagtgcttgctatgcaagcattcaag
acctggagttcaagctccaacactcatgtgcaaagccaggcatggcagca
catgcttgttgtgctgtgactgagtgaaaatagaaggatttccccagggg
attgatagaagccagtcaagctaattgattaacccaagattcaatgaaag
aacctgtctccaacaacaagaaaaagggtggatgaggcttgagtgatagg
gcattaaagagcatgaactgctcttatagaggagtagaattcattatctt
atactcacatcaggtggcttacaactacctgtaactctaggccctgggga
tataatactcacttatggactctggacatctgcacacacatataaacata
tacatacacaaacatagacatggacacaggtgcacaatgcatgcatacat
acacacatgcacacgcgcgcacacacacacacacacaaaataaataatta
aaaagaaaatgaagattttacaggcatatatattcatccatttctggtct
catacatgtacatcatatacatgcatatatgtacatatatgcacacacat
agatatatatgtacatataccagagagagggagagagacacaaatgaaac
aaagtttgagcagaaagaaaatagtgagaatctaaatccctgcctattct
ctaccttatgagagtaatagcatgataatccatgttatgattggattgtg
ttgaatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835448_18835968
seq2: B6Ng01-124K03.b_46_567 (reverse)

seq1  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50

seq1  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100

seq1  GGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGT  150
      |||||||||| |||||||||||| |||||||||||||||||||||| |||
seq2  GGTTGTTATCGTGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGT  150

seq1  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200

seq1  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  ACTGAAACTTATAGAGGAGAAAGTGGGAAAAAGCCTTGAAGATATGGGCA  250

seq1  GAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAG  299
       ||||||||| ||||||||||||||||||||||| |||||||| || | |
seq2  CAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCG  300

seq1  AGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  349
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  350

seq1  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  399
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATTT  400

seq1  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  449
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTATCTTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  450

seq1  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGG  499
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGG  500

seq1  CTCAGAACTGAACAAAGAATTC  521
      ||||||||||||||||||||||
seq2  CTCAGAACTGAACAAAGAATTC  522

seq1: chr6_111904455_111905580
seq2: B6Ng01-124K03.g_67_1173

seq1  GAATTCATGCTTCATCAAGCACTAAAGAACCTTCTCCATGCCTTTCATGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCTTCATCAAGCACTAAAGAACCTTCTCCATGCCTTTCATGC  50

seq1  CTTGACAAGTCTGTCAGCCTGGCTCTGCCCATGTACATGAAGAGCCAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGACAAGTCTGTCAGCCTGGCTCTGCCCATGTACATGAAGAGCCAAAT  100

seq1  GTGTAAAGACACAGGTGAGCAAAAAGAACTCTTGCTTGTTCTGAAATGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAAGACACAGGTGAGCAAAAAGAACTCTTGCTTGTTCTGAAATGAC  150

seq1  GGCTCTAATCACTCCAATTGTGCAGCTGCTTGTGTGGCCTCATAAAGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTAATCACTCCAATTGTGCAGCTGCTTGTGTGGCCTCATAAAGGAA  200

seq1  TTCAGAATCTCATGTCCACTCTGGCTAGGAGAAGAACAAATTCTTCCTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAATCTCATGTCCACTCTGGCTAGGAGAAGAACAAATTCTTCCTCC  250

seq1  ATGCTATGTCAAGCCAGAGCTACCCACCAAGTTGACATGCAGTTTGTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATGTCAAGCCAGAGCTACCCACCAAGTTGACATGCAGTTTGTCTT  300

seq1  TTCAAATCCATAGGATATTTTTCAAATGAACCAAGAAAAAGAGGCCACGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATCCATAGGATATTTTTCAAATGAACCAAGAAAAAGAGGCCACGG  350

seq1  GCAGAAAGCATAGCTCAGTGGGTAAAGTGCTTGCTATGCAAGCATTCAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAGCATAGCTCAGTGGGTAAAGTGCTTGCTATGCAAGCATTCAAG  400

seq1  ACCTGGAGTTCAAGCTCCAACACTCATGTGCAAAGCCAGGCATGGCAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGAGTTCAAGCTCCAACACTCATGTGCAAAGCCAGGCATGGCAGCA  450

seq1  CATGCTTGTTGTGCTGTGACTGAGTGAAAATAGAAGGATTTCCCCAGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTTGTTGTGCTGTGACTGAGTGAAAATAGAAGGATTTCCCCAGGGG  500

seq1  ATTGATAGAAGCCAGTCAAGCTAATTGATTAACCCAAGATTCAATGAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATAGAAGCCAGTCAAGCTAATTGATTAACCCAAGATTCAATGAAAG  550

seq1  AACCTGTCTCCAACAACAAGAAAAAGGGTGGATGAGGCTTGAGTGATAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTCTCCAACAACAAGAAAAAGGGTGGATGAGGCTTGAGTGATAGG  600

seq1  GCATTAAAGAGCATGAACTGCTCTTATAGAGGAGTAGAATTCATTATCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTAAAGAGCATGAACTGCTCTTATAGAGGAGTAGAATTCATTATCTT  650

seq1  ATACTCACATCAGGTGGCTTACAACTACCTGTAACTCTAGGCCCTGGGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCACATCAGGTGGCTTACAACTACCTGTAACTCTAGGCCCTGGGGA  700

seq1  TATAATACTCACTTATGGACTCTGGACATCTGCACACACATATAAACATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATACTCACTTATGGACTCTGGACATCTGCACACACATATAAACATA  750

seq1  TACATACACAAACATAGACATGGACACAGGTGCACAATGCATGCATACAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACACAAACATAGACATGGACACAGGTGCACAATGCATGCATACAT  800

seq1  ACACACATGCACACGCGCGCACACACACACACACACAAAATAAATAATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATGCACACGCGCGCACACACACACACACACAAAATAAATAATTA  850

seq1  AAAAGAAAATGAAGAATTTTACAGGCATATATATTCATCCATTTCTGGTC  900
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAATGAAG-ATTTTACAGGCATATATATTCATCCATTTCTGGTC  899

seq1  TCCATACATGTACATCATATACATGCATATATGTACATATATGCACACAC  950
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  T-CATACATGTACATCATATACATGCATATATGTACATATATGCACACAC  948

seq1  ATAAGAATATATATGTACATATACCAGAGAGAGGGAAGAGAAAGAACACA  1000
      |||   ||||||||||||||||||||||||||||| |||||    |||| 
seq2  ATA--GATATATATGTACATATACCAGAGAGAGGG-AGAGA---GACAC-  991

seq1  AAATGAAACAAAGTTTGAAGCAAGAAAGAAAATAAGTGAGAATCTAAATC  1050
      ||||||||||||||||| ||| ||||||||||| ||||||||||||||||
seq2  AAATGAAACAAAGTTTG-AGC-AGAAAGAAAAT-AGTGAGAATCTAAATC  1038

seq1  CCTGCATAATTCTC-ACCTTATGAGAAGGTTAAATAGCATTGATAATTCA  1099
      ||||| | |||||| |||||||||||  ||  ||||||| ||||||| ||
seq2  CCTGCCT-ATTCTCTACCTTATGAGA--GT--AATAGCA-TGATAATCCA  1082

seq1  TGTTAATGAATTTGATTGTGTTGAATC  1126
      |||| ||| ||| ||||||||||||||
seq2  TGTT-ATG-ATTGGATTGTGTTGAATC  1107