BAC Information

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BAC

Clone NameB6Ng01-126J01
Chromosome6 (Build37)6 (Build37)
Map Location 18,835,448 - 18,835,96862,120,866 - 62,121,775
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126J01.bB6Ng01-126J01.g
ACCDH928902DH928903
length1,002914
definitionDH928902|Mus musculus domesticus DNA, BAC clone: B6Ng01-126J01, 5' end.DH928903|Mus musculus domesticus DNA, BAC clone: B6Ng01-126J01, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,448 - 18,835,968)(62,120,866 - 62,121,775)
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatgggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttggtcctgccaatccatgagcatgggagatctttccatct
tctgagatcttctttaatttctttcttcagggacttgaagtttttatcat
accgatctttcacttccttcgttagagtcacgccgagatattttatatta
ttgtggctattgagaaggtgttgtttccctaatttctttctcagcctgtt
ta
gaattctttctctatttaaatgtgctttcctgtggcctggaggtttgatt
gttctgagttagctgaagacagtttctgtatctaactgaacattatatat
tctgtatttctgtttcaaaacttgatcggtgtgcttcctgcatctggcat
gcttactaggtggtgaagatatatttatctaagtaggtaaaattcttatg
agttagtaattaagactctaaattaaaaggaaaagaagctggtgtcttga
ggtctgccctgagggtttgtcacttagatgaaacaaatcctttaattcat
ttaagttaaaaggctgctgtggaatacaagtaaaattcttctgtctgtgt
tggcattttctttgcagcagtcttccagttcagttagatttttatgtgtt
ctgagacaatagaaaaccaattcttgaataaggaaacataaggcaaagac
aaacgggaaccaggggtaccagcatggctggaccatgctccctgcccctg
tcctaacccttggacatgtaccatactctacatagaggaagaagcaagga
atgctattcctaccatgttcttttttcccaagtacctatagcctgtttga
ggaaagcaggagacatgttagatgtgaaggagagttgagagaagcagaaa
caaatagcttagtacagtgtgttctagacagactcaacaaagaactcagg
tatgctagtgtttctgtgcaggcaataaaattgacctgaataagagggac
tgtgttcgaggagagtgagaggggatatcattcccattatctattcatgg
aagagagatgacaacaatgatgtgaatgcaaccataatggattcccttca
gagctgatcccatgcctatgcaaagagtccagggaaaattatcgaatgaa
gttatgacatcagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835448_18835968
seq2: B6Ng01-126J01.b_46_567 (reverse)

seq1  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCCAAAAC  50

seq1  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100

seq1  GGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGT  150
      |||||||||| |||||||||||| |||||||||||||||||||||| |||
seq2  GGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGT  150

seq1  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200

seq1  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250

seq1  GAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAG  299
       ||||||||| ||||||||||||||||||||||| |||||||| || | |
seq2  CAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCG  300

seq1  AGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  349
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  350

seq1  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  399
      |||||| ||| ||||||||||||||||||||||||| |||||||||||||
seq2  AGACACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCT  400

seq1  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  450

seq1  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGG  499
      ||||||||||||||| |||||||||||||||||||| |||| ||||||||
seq2  CTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCCTTAAAAAATGGGG  500

seq1  CTCAGAACTGAACAAAGAATTC  521
      ||||||||||||||||||||||
seq2  CTCAGAACTGAACAAAGAATTC  522

seq1: chr6_62120866_62121775
seq2: B6Ng01-126J01.g_68_981

seq1  GAATTCTTTCTCTATTTAAATGTGCTTTCCTGTGGCCTGGAGGTTTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCTCTATTTAAATGTGCTTTCCTGTGGCCTGGAGGTTTGATT  50

seq1  GTTCTGAGTTAGCTGAAGACAGTTTCTGTATCTAACTGAACATTATATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAGTTAGCTGAAGACAGTTTCTGTATCTAACTGAACATTATATAT  100

seq1  TCTGTATTTCTGTTTCAAAACTTGATCGGTGTGCTTCCTGCATCTGGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTATTTCTGTTTCAAAACTTGATCGGTGTGCTTCCTGCATCTGGCAT  150

seq1  GCTTACTAGGTGGTGAAGATATATTTATCTAAGTAGGTAAAATTCTTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTACTAGGTGGTGAAGATATATTTATCTAAGTAGGTAAAATTCTTATG  200

seq1  AGTTAGTAATTAAGACTCTAAATTAAAAGGAAAAGAAGCTGGTGTCTTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGTAATTAAGACTCTAAATTAAAAGGAAAAGAAGCTGGTGTCTTGA  250

seq1  GGTCTGCCCTGAGGGTTTGTCACTTAGATGAAACAAATCCTTTAATTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTGCCCTGAGGGTTTGTCACTTAGATGAAACAAATCCTTTAATTCAT  300

seq1  TTAAGTTAAAAGGCTGCTGTGGAATACAAGTAAAATTCTTCTGTCTGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTAAAAGGCTGCTGTGGAATACAAGTAAAATTCTTCTGTCTGTGT  350

seq1  TGGCATTTTCTTTGCAGCAGTCTTCCAGTTCAGTTAGATTTTTATGTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATTTTCTTTGCAGCAGTCTTCCAGTTCAGTTAGATTTTTATGTGTT  400

seq1  CTGAGACAATAGAAAACCAATTCTTGAATAAGGAAACATAAGGCAAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGACAATAGAAAACCAATTCTTGAATAAGGAAACATAAGGCAAAGAC  450

seq1  AAACGGGAACCAGGGGTACCAGCATGGCTGGACCATGCTCCCTGCCCCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACGGGAACCAGGGGTACCAGCATGGCTGGACCATGCTCCCTGCCCCTG  500

seq1  TCCTAACCCTTGGACATGTACCATACTCTACATAGAGGAAGAAGCAAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAACCCTTGGACATGTACCATACTCTACATAGAGGAAGAAGCAAGGA  550

seq1  ATGCTATTCCTACCATGTTCTTTTTTCCCAAGTACCTATAGCCTGTTTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTATTCCTACCATGTTCTTTTTTCCCAAGTACCTATAGCCTGTTTGA  600

seq1  GGAAAGCAGGAGACATGTTAGATGTGAAGGAGAGTTGAGAGAAGCAGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGCAGGAGACATGTTAGATGTGAAGGAGAGTTGAGAGAAGCAGAAA  650

seq1  CAAATAGCTTAGTACAGTGTGTTCTAGACAGACTCAACAAAGAACTCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAGCTTAGTACAGTGTGTTCTAGACAGACTCAACAAAGAACTCAGG  700

seq1  TATGCTAGTGTTTCTGTGCAGGCAATAAAATTGACCTGAATAAGAGGGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTAGTGTTTCTGTGCAGGCAATAAAATTGACCTGAATAAGAGGGAC  750

seq1  TGTGTTCGAGGAGAGTGAGA-GGGATATCATTCCCATTATCTAGTCATGG  799
      |||||||||||||||||||| |||||||||||||||||||||| ||||||
seq2  TGTGTTCGAGGAGAGTGAGAGGGGATATCATTCCCATTATCTATTCATGG  800

seq1  AAGAGAGATGACAACAATGATGTGAATGCAACCATAATGGATT-CCTTCA  848
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AAGAGAGATGACAACAATGATGTGAATGCAACCATAATGGATTCCCTTCA  850

seq1  GAGCTGATCCCATGCCTATGC-AAGAGTCCAGGG-AAAGTATCGAATGAA  896
      ||||||||||||||||||||| |||||||||||| ||| |||||||||||
seq2  GAGCTGATCCCATGCCTATGCAAAGAGTCCAGGGAAAATTATCGAATGAA  900

seq1  GTTATGACATCAGG  910
      ||||||||||||||
seq2  GTTATGACATCAGG  914