BAC Information

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BAC

Clone NameB6Ng01-128G02
Chromosome6 (Build37)
Map Location 37,959,381 - 38,090,038
singlet/doubletdoublet
Overlap geneSvopl, Atp6v0a4, LOC100039657, D630002J15Rik, D630045J12Rik
Upstream geneDgki, Creb3l2, Akr1d1, LOC665046, Ybx1-ps2, LOC100039636, LOC665102, Trim24
Downstream geneLOC665125, Zc3hav1l, Zc3hav1, Rpl30-ps1, Ttc26, D130059P03Rik, 3110054G05Rik, 1110001J03Rik, LOC621228, Luc7l2, Klrg2, LOC665180, Hipk2, Tbxas1, 1700025N23Rik, Parp12, 4930599N23Rik, A630082K20Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128G02.bB6Ng01-128G02.g
ACCDH930245DH930246
length1,087338
definitionDH930245|Mus musculus domesticus DNA, BAC clone: B6Ng01-128G02, 5' end.DH930246|Mus musculus domesticus DNA, BAC clone: B6Ng01-128G02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,959,381 - 37,960,479)(38,089,701 - 38,090,038)
sequence
gaattctccacattcaaactggttaaggaagtgaagtacatagtggctga
ttgcactagatgggatttaaagtgcctttgtttctcttattttcacattc
cctcttcccctcattccctcccctaccacagttccttaaaggcaataata
ataacaacaacaataataatgtaaagccaacttgttaaagctagttccaa
tatccaaacactgcatcatgcatcttgttggtgctcggtaatgaagcaaa
ttaaactcttccccatgaagatagactccagaggcagcaaaggatgcttc
tatagattgaaatacatctgagctttcaacacacaggaaaaaagaaggag
gagccttcttcctgctttgccgagcgagtggcctctcttgcagagctgac
actgatacctgtgtggtccttgaagaaggtgtcctcagcgagaaaggtgc
tgttcccgtggcctgcatgctttagatatcatcttgcctagagtactaaa
catttgcagccattgtgtaccttaacaagaaggaactcatctgtggtcac
aaaaatattttgttcatgagaagtatgtatctgaggagcactttggcctt
gattattgtcattattatataatgtctctcaaatgctatgtcatatatgt
ccctaactgctttgatttaagtagtctcatcctccagattaacatatgca
aatacgctattattcacccctgctttagaatgtggaaggcataggaagaa
tgagctacagccgcccagagtcaggagcccacttcatgcccaggaagcca
agcagagcagaaccccccaggcctcagcctcagcccacgttgtgatcttt
tctgacccttgccaaggcccctggaatcaatgtggcctgatacataaaca
gtgccagatccctggggagacgctactggtgactgagaacccagagtctc
catccccactggaaactgggagagaaagcttggcctcaagcagctgctca
cagagactgggtgccccacccaccatccttcatcccctactgtagctgtc
tcttgctacatgtgaatagctgaaggattttcaaaag
caagccagcctggtctacatagtgagttccaggacagccatggctctgca
gagaggccctatctcaaaacaaaacaaaactttcaacaaacaaaacaaaa
caaaaaacaattcttgttagtattgcagcacattctcttaatcccagcac
tcagaggcagaggtagatggatctcgtgagtgtaggactagcctgttcta
catagtaaggacctggctagctaaggcaatatattgaaacactcctcagg
aacaatggtaatattcctgcaagtttaccataaaggcctaagtttgatat
tgtcttttccttccttcctccctccctccctccctccc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_37959381_37960479
seq2: B6Ng01-128G02.b_43_1129

seq1  GAATTCTCCACATTCAAACTGGTTAAGGAAGTGAAGTACATAGTGGCTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCACATTCAAACTGGTTAAGGAAGTGAAGTACATAGTGGCTGA  50

seq1  TTGCACTAGATGGGATTTAAAGTGCCTTTGTTTCTCTTATTTTCACATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACTAGATGGGATTTAAAGTGCCTTTGTTTCTCTTATTTTCACATTC  100

seq1  CCTCTTCCCCTCATTCCCTCCCCTACCACAGTTCCTTAAAGGCAATAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCCCCTCATTCCCTCCCCTACCACAGTTCCTTAAAGGCAATAATA  150

seq1  ATAACAACAACAATAATAATGTAAAGCCAACTTGTTAAAGCTAGTTCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAACAACAATAATAATGTAAAGCCAACTTGTTAAAGCTAGTTCCAA  200

seq1  TATCCAAACACTGCATCATGCATCTTGTTGGTGCTCGGTAATGAAGCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCAAACACTGCATCATGCATCTTGTTGGTGCTCGGTAATGAAGCAAA  250

seq1  TTAAACTCTTCCCCATGAAGATAGACTCCAGAGGCAGCAAAGGATGCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAACTCTTCCCCATGAAGATAGACTCCAGAGGCAGCAAAGGATGCTTC  300

seq1  TATAGATTGAAATACATCTGAGCTTTCAACACACAGGAAAAAAGAAGGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATTGAAATACATCTGAGCTTTCAACACACAGGAAAAAAGAAGGAG  350

seq1  GAGCCTTCTTCCTGCTTTGCCGAGCGAGTGGCCTCTCTTGCAGAGCTGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTTCTTCCTGCTTTGCCGAGCGAGTGGCCTCTCTTGCAGAGCTGAC  400

seq1  ACTGATACCTGTGTGGTCCTTGAAGAAGGTGTCCTCAGCGAGAAAGGTGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATACCTGTGTGGTCCTTGAAGAAGGTGTCCTCAGCGAGAAAGGTGC  450

seq1  TGTTCCCGTGGCCTGCATGCTTTAGATATCATCTTGCCTAGAGTACTAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCGTGGCCTGCATGCTTTAGATATCATCTTGCCTAGAGTACTAAA  500

seq1  CATTTGCAGCCATTGTGTACCTTAACAAGAAGGAACTCATCTGTGGTCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCAGCCATTGTGTACCTTAACAAGAAGGAACTCATCTGTGGTCAC  550

seq1  AAAAATATTTTGTTCATGAGAAGTATGTATCTGAGGAGCACTTTGGCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATTTTGTTCATGAGAAGTATGTATCTGAGGAGCACTTTGGCCTT  600

seq1  GATTATTGTCATTATTATATAATGTCTCTCAAATGCTATGTCATATATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTGTCATTATTATATAATGTCTCTCAAATGCTATGTCATATATGT  650

seq1  CCCTAACTGCTTTGATTTAAGTAGTCTCATCCTCCAGATTAACATATGCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAACTGCTTTGATTTAAGTAGTCTCATCCTCCAGATTAACATATGCA  700

seq1  AATACGCTATTATTCACCCCTGCTTTAGAATGTGGAAGGCATAGGAAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACGCTATTATTCACCCCTGCTTTAGAATGTGGAAGGCATAGGAAGAA  750

seq1  TGAGCTACAGCCGCCCAGAGTCAGGAGCCCACTTCATGCCCAGGAAGCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTACAGCCGCCCAGAGTCAGGAGCCCACTTCATGCCCAGGAAGCCA  800

seq1  AGCAGAGCAGAACCCCCCAGGCCTCAGGCCTCAGCCCACGTTGTGATCTT  850
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AGCAGAGCAGAACCCCCCAGGCCTCA-GCCTCAGCCCACGTTGTGATCTT  849

seq1  TTCTGACCCTTGCCAAGGCCCCTGGAATCAATGTGGCCTGATACATAAAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGACCCTTGCCAAGGCCCCTGGAATCAATGTGGCCTGATACATAAAC  899

seq1  AGTGCCAGATCCCTGGGGAGAACGCTACTGGTGACTGAGAACCCAGAGTC  950
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AGTGCCAGATCCCTGGGGAG-ACGCTACTGGTGACTGAGAACCCAGAGTC  948

seq1  TCCATCCCCACTGGAAACTGGGAGAGAAAGC-TGGCCTCAGGCAGGCTGC  999
      ||||||||||||||||||||||||||||||| |||||||| ||| |||||
seq2  TCCATCCCCACTGGAAACTGGGAGAGAAAGCTTGGCCTCAAGCA-GCTGC  997

seq1  TCACAAGGAGACTGGGTGCCCCACCCACCCATCCCTCCATCCCCCAACTG  1049
      |||||  |||||||||||||||||||| |||| ||| ||| |||| ||| 
seq2  TCACA--GAGACTGGGTGCCCCACCCA-CCAT-CCTTCAT-CCCCTACT-  1041

seq1  GTAGGCTGTTCTC-TGCTACATGTGAAATAGGCTGGAAGGATTTTCAAAA  1098
      ||| |||| |||| ||||||||||| |||| ||| |||||||||||||||
seq2  GTA-GCTG-TCTCTTGCTACATGTG-AATA-GCT-GAAGGATTTTCAAAA  1086

seq1  G  1099
      |
seq2  G  1087

seq1: chr6_38089701_38090038
seq2: B6Ng01-128G02.g_73_410 (reverse)

seq1  GGGAGGGAGGGAGGGAGGGAGGAAGGAAGGAAAAGACAATATCAAACTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGGAGGGAGGGAGGGAGGAAGGAAGGAAAAGACAATATCAAACTTA  50

seq1  GGCCTTTATGGTAAACTTGCAGGAATATTACCATTGTTCCTGAGGAGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTATGGTAAACTTGCAGGAATATTACCATTGTTCCTGAGGAGTGT  100

seq1  TTCAATATATTGCCTTAGCTAGCCAGGTCCTTACTATGTAGAACAGGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATATATTGCCTTAGCTAGCCAGGTCCTTACTATGTAGAACAGGCTA  150

seq1  GTCCTACACTCACGAGATCCATCTACCTCTGCCTCTGAGTGCTGGGATTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTACACTCACGAGATCCATCTACCTCTGCCTCTGAGTGCTGGGATTA  200

seq1  AGAGAATGTGCTGCAATACTAACAAGAATTGTTTTTTGTTTTGTTTTGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAATGTGCTGCAATACTAACAAGAATTGTTTTTTGTTTTGTTTTGTT  250

seq1  TGTTGAAAGTTTTGTTTTGTTTTGAGATAGGGCCTCTCTGCAGAGCCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGAAAGTTTTGTTTTGTTTTGAGATAGGGCCTCTCTGCAGAGCCATG  300

seq1  GCTGTCCTGGAACTCACTATGTAGACCAGGCTGGCTTG  338
      ||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCCTGGAACTCACTATGTAGACCAGGCTGGCTTG  338