BAC Information

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BAC

Clone NameB6Ng01-128L22
Chromosome6 (Build37)
Map Location 53,536,387 - 53,728,358
singlet/doubletdoublet
Overlap geneCreb5, LOC384386
Upstream geneHibadh, Tax1bp1, Jazf1, LOC666259, LOC666516, D430007I03
Downstream gene1200009O22Rik, Cpvl, LOC666305, Chn2, LOC100042056, Prr15, EG640926, Wipf3, Scrn1, Fkbp14, Plekha8, LOC100041292, 2410066E13Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128L22.bB6Ng01-128L22.g
ACCDH930514DH930515
length1,1231,103
definitionDH930514|Mus musculus domesticus DNA, BAC clone: B6Ng01-128L22, 5' end.DH930515|Mus musculus domesticus DNA, BAC clone: B6Ng01-128L22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(53,727,214 - 53,728,358)(53,536,387 - 53,537,507)
sequence
gaattctgacatctccaatgtatcatatgcagcaaggaaggattgtcacg
tctctggaaaaggtccataaactcgatctgccattaagccactggttaat
ttacaaggagcaatgctacattaggctatgggacttctgaaaggtggaaa
tcatacaatttttcttttcttttttcaagataattttgtgattatattta
tgtacagaaaactcagcatttagcccaatttagtggcgagttttttagcc
tttgccttttccagcttggcaatgcgagtcacagacttaggacattgcct
ccctagtggctgtggatctcatcatatcggttattataattggtcccaat
agcttccaccagcttagccagagcacccttgttttctgagttaacctgtg
tgaaggcaacagtggtgtggaacaggtgccccggcctggcctttcccttg
atgatgcagtaaggcatatccatctttcgacacagggcaggtaggaaaac
caccagctcaatggttgggcaatcaccaccagcggagccttcttgttctc
caccaaggtgatgactgtgttgactcctgcttggaggacaggtagaatct
tagttggaacgtcccctttgccagcagctttcttctcagcatgggccagt
attctttgcttcttctcttgctttgtctctggcctttacttgtggacacg
cttaagcagttgggtagttgcttgcctgtccagggcctgggtgaatggca
ggaggtgctttgagctgcttatagaggatgggtttttgctgctacagcct
gatgtagctgagcacttgaggaagcatgtgagatctctttgggactggat
gtcctgcccaatgctgaatgtcctgggcctttcttcaaacaaaggattga
ccacctttttggccttctgttcttcacacggtgtgggctagggccacctt
cttccccttggccttctttctttgggcattttgcttagctgaggagacca
cattttttttaaagaagattatctagctttatggtctctgcctcttacat
cagagtcatgcatctgtggtcatatggtatttacatggcagaattcaaat
gtaccctacatgagcatttttct
gaattcatttatgaagacaagcactggctgtggaccagtgaaccaaaggg
ggttgccagaagtttgtcctgggcagccattcttgaatgccagcggctct
ctggcacccctaagctgactccacgttaggaaaacaaattctctcatcca
tattggactttaagataattgcttttatttatttcacttaacacacacca
ccagcaccgtcaccacacgtggtagaagttatgtcatcttccttatgaag
cagacagtggctctgacaaccagttatgagcaatgaatgccttatttata
aaaaagattacccagcttatgggtttgatgcttgggaactgaaaataaaa
gttaattttttttgacctttctggagagtttaagcaactgaaatcactgg
caaaaaaaaaagaaaaaaaaaaaaaaagaaaagtggaaagcacttaattc
tcataagaacagttgagtggttggtttggcattaacctaaagggaaagtc
agaactcctggaacaaaccatttggtattttcccctttgtgctgtaagag
aaagagtcccagacttcaggaagctctgttaccaacagcagacaagcatc
ctggtgctgctctggtcgaatctctacaggtccataaaccttgcgactct
gtaggtattctcttgtctccttcttctacgtgaagcactatgaactgaca
gcaagcatgaactttcccaatggtcaaatcaatcagaataattatgtctg
acacacacatccccagttatcatgggctatgaatagaagatatgaggcag
gcgttgaacaattacacatatctacaggtacaacatggtatcaagcaggg
ctaccacaccacagactagacatacctcagacttaggactcgagaagttt
tagaaaataatgtttaagcaaaggtctaaaggatgaataacaaataacaa
agtgagatggataggcagtctaggcataggcacagatgagtcaggccctg
acagagagaacttgtatattcatgaaaatatgaaagtagtactacttcaa
ggaggggtagcacttagcattttaggatgctttcttcttgggggggggag
ggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_53727214_53728358
seq2: B6Ng01-128L22.b_48_1170 (reverse)

seq1  AGAAAAATGCTTACCATGTAGGGTACATATTGAATACATGCCATGTAAAT  50
      |||||||||||   |||||||||||||| |||||| | ||||||||||  
seq2  AGAAAAATGCT---CATGTAGGGTACAT-TTGAATTC-TGCCATGTAA--  43

seq1  ATACCATTATAGACACAGATGCAATGACCTCTGATGT-AGAGGCAGAGAC  99
      |||||| |||   ||||||||| |||| ||||||||| ||||||||||||
seq2  ATACCA-TATGACCACAGATGC-ATGA-CTCTGATGTAAGAGGCAGAGAC  90

seq1  CATAAAAGCTTAGATAAATCCTTCTTTTAAAAAAAAAATTGTGTGTCTCC  149
      ||| ||||| |||||||   |||||||    ||||||| |||| ||||||
seq2  CAT-AAAGC-TAGATAA--TCTTCTTT----AAAAAAAATGTG-GTCTCC  131

seq1  TCCAGCTAAGCAAAATGCCCAAAAGAAAGAAGGCCAAGGGGAAGAAGGTG  199
      | |||||||||||||||||| |||||||||||||||||||||||||||||
seq2  T-CAGCTAAGCAAAATGCCC-AAAGAAAGAAGGCCAAGGGGAAGAAGGTG  179

seq1  GCCCTAGCCCACACCGTTGTGAAGAAACAGAAGGCCAAAAAGGTGGTCAA  249
      |||||||||||||||| ||||||| |||||||||||||||||||||||||
seq2  GCCCTAGCCCACACCG-TGTGAAG-AACAGAAGGCCAAAAAGGTGGTCAA  227

seq1  TCCTTTGTTTGAAGAAAGGCCCAGGACCTTCAGCATTGGGCAGGACATCC  299
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TCCTTTGTTTGAAGAAAGGCCCAGGACATTCAGCATTGGGCAGGACATCC  277

seq1  AGTCCCAAAGAGATCTCACATGCTTCCTCAAGTGCTCAGCTACATCAGGC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCAAAGAGATCTCACATGCTTCCTCAAGTGCTCAGCTACATCAGGC  327

seq1  TGTAGCAGCAAAAACCCATCCTCTATAAGCAGCTCAAAGCACCTCCTGCC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCAGCAAAAACCCATCCTCTATAAGCAGCTCAAAGCACCTCCTGCC  377

seq1  ATTCACCCAGGCCCTGGACAGGCAAGCAACTACCCAACTGCTTAAGCGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCACCCAGGCCCTGGACAGGCAAGCAACTACCCAACTGCTTAAGCGTG  427

seq1  TCCACAAGTAAAGGCCAGAGACAAAGCAAGAGAAGAAGCAAAGAATACTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACAAGTAAAGGCCAGAGACAAAGCAAGAGAAGAAGCAAAGAATACTG  477

seq1  GCCCATGCTGAGAAGAAAGCTGCTGGCAAAGGGGACGTTCCAACTAAGAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATGCTGAGAAGAAAGCTGCTGGCAAAGGGGACGTTCCAACTAAGAT  527

seq1  TCTACCTGTCCTCCAAGCAGGAGTCAACACAGTCATCACCTTGGTGGAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTGTCCTCCAAGCAGGAGTCAACACAGTCATCACCTTGGTGGAGA  577

seq1  ACAAGAAGGCTCCGCTGGTGGTGATTGCCCAACCATTGAGCTGGTGGTTT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGAAGGCTCCGCTGGTGGTGATTGCCCAACCATTGAGCTGGTGGTTT  627

seq1  TCCTACCTGCCCTGTGTCGAAAGATGGATATGCCTTACTGCATCATCAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACCTGCCCTGTGTCGAAAGATGGATATGCCTTACTGCATCATCAAG  677

seq1  GGAAAGGCCAGGCCGGGGCACCTGTTCCACACCACTGTTGCCTTCACACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGCCAGGCCGGGGCACCTGTTCCACACCACTGTTGCCTTCACACA  727

seq1  GGTTAACTCAGAAAACAAGGGTGCTCTGGCTAAGCTGGTGGAAGCTATTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAACTCAGAAAACAAGGGTGCTCTGGCTAAGCTGGTGGAAGCTATTG  777

seq1  GGACCAATTATAATAACCGATATGATGAGATCCACAGCCACTAGGGAGGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAATTATAATAACCGATATGATGAGATCCACAGCCACTAGGGAGGC  827

seq1  AATGTCCTAAGTCTGTGACTCGCATTGCCAAGCTGGAAAAGGCAAAGGCT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCCTAAGTCTGTGACTCGCATTGCCAAGCTGGAAAAGGCAAAGGCT  877

seq1  AAAAAACTCGCCACTAAATTGGGCTAAATGCTGAGTTTTCTGTACATAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAACTCGCCACTAAATTGGGCTAAATGCTGAGTTTTCTGTACATAAA  927

seq1  TATAATCACAAAATTATCTTGAAAAAAGAAAAGAAAAATTGTATGATTTC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCACAAAATTATCTTGAAAAAAGAAAAGAAAAATTGTATGATTTC  977

seq1  CACCTTTCAGAAGTCCCATAGCCTAATGTAGCATTGCTCCTTGTAAATTA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTTCAGAAGTCCCATAGCCTAATGTAGCATTGCTCCTTGTAAATTA  1027

seq1  ACCAGTGGCTTAATGGCAGATCGAGTTTATGGACCTTTTCCAGAGACGTG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTGGCTTAATGGCAGATCGAGTTTATGGACCTTTTCCAGAGACGTG  1077

seq1  ACAATCCTTCCTTGCTGCATATGATACATTGGAGATGTCAGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCCTTCCTTGCTGCATATGATACATTGGAGATGTCAGAATTC  1123

seq1: chr6_53536387_53537507
seq2: B6Ng01-128L22.g_68_1170

seq1  GAATTCATTTATGAAGACAAGCACTGGCTGTGGACCAGTGAACCAAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTATGAAGACAAGCACTGGCTGTGGACCAGTGAACCAAAGGG  50

seq1  GGTTGCCAGAAGTTTGTCCTGGGCAGCCATTCTTGAATGCCAGCGGCTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGCCAGAAGTTTGTCCTGGGCAGCCATTCTTGAATGCCAGCGGCTCT  100

seq1  CTGGCACCCCTAAGCTGACTCCACGTTAGGAAAACAAATTCTCTCATCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCACCCCTAAGCTGACTCCACGTTAGGAAAACAAATTCTCTCATCCA  150

seq1  TATTGGACTTTAAGATAATTGCTTTTATTTATTTCACTTAACACACACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGACTTTAAGATAATTGCTTTTATTTATTTCACTTAACACACACCA  200

seq1  CCAGCACCGTCACCACACGTGGTAGAAGTTATGTCATCTTCCTTATGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCACCGTCACCACACGTGGTAGAAGTTATGTCATCTTCCTTATGAAG  250

seq1  CAGACAGTGGCTCTGACAACCAGTTATGAGCAATGAATGCCTTATTTATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGTGGCTCTGACAACCAGTTATGAGCAATGAATGCCTTATTTATA  300

seq1  AAAAAGATTACCCAGCTTATGGGTTTGATGCTTGGGAACTGAAAATAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGATTACCCAGCTTATGGGTTTGATGCTTGGGAACTGAAAATAAAA  350

seq1  GTTAATTTTTTTTGACCTTTCTGGAGAGTTTAAGCAACTGAAATCACTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTTTTTTTGACCTTTCTGGAGAGTTTAAGCAACTGAAATCACTGG  400

seq1  CAAAAAAAAAAGAAAAAAAAAAAAAAAGAAAAGTGGAAAGCACTTAATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAAAAAAGAAAAAAAAAAAAAAAGAAAAGTGGAAAGCACTTAATTC  450

seq1  TCATAAGAACAGTTGAGTGGTTGGTTTGGCATTAACCTAAAGGGAAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGAACAGTTGAGTGGTTGGTTTGGCATTAACCTAAAGGGAAAGTC  500

seq1  AGAACTCCTGGAACAAACCATTTGGTATTTTCCCCTTTGTGCTGTAAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTCCTGGAACAAACCATTTGGTATTTTCCCCTTTGTGCTGTAAGAG  550

seq1  AAAGAGTCCCAGACTTCAGGAAGCTCTGTTACCAACAGCAGACAAGCATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTCCCAGACTTCAGGAAGCTCTGTTACCAACAGCAGACAAGCATC  600

seq1  CTGGTGCTGCTCTGGTCGAATCTCTACAGGTCCATAAACCTTGCGACTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCTGCTCTGGTCGAATCTCTACAGGTCCATAAACCTTGCGACTCT  650

seq1  GTAGGTATTCTCTTGTCTCCTTCTTCTACGTGAAGCACTATGAACTGACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTATTCTCTTGTCTCCTTCTTCTACGTGAAGCACTATGAACTGACA  700

seq1  GCAAGCATGAACTTTCCCAATGGTCAAATCAATCAGAATAATTATGTCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCATGAACTTTCCCAATGGTCAAATCAATCAGAATAATTATGTCTG  750

seq1  ACACACACATCCCCAGTTATCATGGGCTATGAATAGAAGATATGAGGCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACATCCCCAGTTATCATGGGCTATGAATAGAAGATATGAGGCAG  800

seq1  GCGTTGAACAATTACACATATCTACAGGTACAACATGGTATCAAGCAGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GCGTTGAACAATTACACATATCTACAGGTACAACATGGTATCAAGCA-GG  849

seq1  GCTACCACACCACAGACTAGACATACCTCAGACTTAGGACTCGAAGAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||   |||
seq2  GCTACCACACCACAGACTAGACATACCTCAGACTTAGGACTCGA--GAAG  897

seq1  TTTTAAGAAAATAATGTTTAAGCAAAGGTCTAAAGGATGAATAACAAAAT  950
      |||| |||||||||||||||||||||||||||||||||||||||| ||||
seq2  TTTT-AGAAAATAATGTTTAAGCAAAGGTCTAAAGGATGAATAAC-AAAT  945

seq1  AACAAAAGTGAAGATGGATAGGCAGTCTAGGCATAGGCCACAGGATGAGT  1000
      ||| |||||| |||||||||||||||||||||||||| |||| |||||||
seq2  AAC-AAAGTG-AGATGGATAGGCAGTCTAGGCATAGG-CACA-GATGAGT  991

seq1  CAAGGCCCTGGAACAGGAGAGAACTTGTTATATTCATGGAAATTAATGAA  1050
      | ||||||||  ||| ||||||||||| |||||||||| ||||  ||| |
seq2  C-AGGCCCTG--ACA-GAGAGAACTTG-TATATTCATGAAAAT--ATG-A  1033

seq1  AAGTAGTACTACCTCCAAGAGGTGTAGCACTTTAGCATTTAAAGGATGCT  1100
      |||||||||||| || | |||| ||||||| |||||||||  ||||||||
seq2  AAGTAGTACTACTTCAAGGAGGGGTAGCAC-TTAGCATTT-TAGGATGCT  1081

seq1  TTC-TCTTGGGGGGGGGGGGGG  1121
      ||| ||||||||||||| ||||
seq2  TTCTTCTTGGGGGGGGGAGGGG  1103