BAC Information

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BAC

Clone NameB6Ng01-129P01
Chromosome6 (Build37)
Map Location 17,953,064 - 17,954,259
singlet/doubletsinglet
Overlap geneWnt2
Upstream geneTes, EG232599, Cav2, Cav1, Met, Capza2, St7
Downstream geneAsz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7, LOC626180
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129P01.bB6Ng01-129P01.g
ACCDH931396DH931397
length1,176325
definitionDH931396|Mus musculus domesticus DNA, BAC clone: B6Ng01-129P01, 5' end.DH931397|Mus musculus domesticus DNA, BAC clone: B6Ng01-129P01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgccaactatagttcataaaagaaggcacaaatactgccacc
aagaacagctgcctaccgagctttgggtttctagtggacaacatgttacc
taagagttccatttgttttgaacttgactggggaagaggtggaggcttac
ttgtttcctctgttggagaagagacctcgggatgacctctagcccaggtc
agggttttacatcattcccattgaaagtggtctgtgattagacgcagaca
cctcctctgcagaggaaggcctcattccttcattacacatggacctatct
ttaactgaagggttgctttgatttacagatgcctgggggtaatcaccaga
ctagatagctccgaagtcaccagggctcttctcggaaagtccctctctta
agatgtggcctccactctggcctgcaaaatatcacatgcccaacctcttg
cagttgctagtcccccagcaaaatgtgctattagtaccccggcaaaatgt
gctgcaaatggaggagtttttagttgatcatcagaaaatacgtgtcttct
tcagaagagaaacaaggggacgtgtttagttatcgcttccacaatttctt
cttcaagatttttttccttatcatttattaggaacaattgaaagtattcc
tttaaaactgtgactcggtgggctaggaagatggcttagtgcaaaagagg
gcttgcagtgcaaacaggggaggctgagttcaaatccccagcgttcagat
aaaagcgagacatggcttgtgtgtacctgtgatcacagtgttgggaggca
gaaatgagtggatctgggaagctctctggccagttaagctagtcaaaatg
gcaagctttatgctcagtaagagattctgccgtgtgggtataaagaagac
catttcttctgtgcgtgcacaggaatgtacacattcacacacccacacta
cacaaaggaaaaaaaaacaaggaaaaaatcttggaaagcttctaaacaaa
aaggctggacatactctaaatgtagctgttaatgtgatcagataaactct
cagcttggtgggcacctccaaataagttccaatcttcatactggtatctt
tattatgaactgctcgccaccagtccacgatcaattggagaggaagtgat
atggtgagaaaagatatggaattttg
taccctattgaaatctaaaggttcaccatacctcctgttgaagcattgat
cctaatgcagctatagtcagagatgaggctttgaagatgaaataagcaga
aggctctaagattcagatcttagtctattgccaagtgaagatgcttcaat
cccacttgagagggagaaagaaatttgggataggaggggggaaggacctg
gacgggagaggggagagggcaagggaaaaaggaacataatcaggtattgg
ggatagggacaagagagaagtcctgagtgccagcataatgaatggaaata
tgcaacctagggaggtgggaggtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_17953064_17954259
seq2: B6Ng01-129P01.b_49_1224

seq1  GAATTCTTTGCCAACTATAGTTCATAAAAGAAGGCACAAATACTGCCACC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGCCAACTATAGTTCATAAAAGAAGGCACAAATACTGCCACC  50

seq1  AAGAACAGCTGCCTACCGAGCTTTGGGTTTCTAGTGGACAACATGTTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACAGCTGCCTACCGAGCTTTGGGTTTCTAGTGGACAACATGTTACC  100

seq1  TAAGAGTTCCATTTGTTTTGAACTTGACTGGGGAAGAGGTGGAGGCTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTTCCATTTGTTTTGAACTTGACTGGGGAAGAGGTGGAGGCTTAC  150

seq1  TTGTTTCCTCTGTTGGAGAAGAGACCTCGGGATGACCTCTAGCCCAGGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTCCTCTGTTGGAGAAGAGACCTCGGGATGACCTCTAGCCCAGGTC  200

seq1  AGGGTTTTACATCATTCCCATTGAAAGTGGTCTGTGATTAGACGCAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTTACATCATTCCCATTGAAAGTGGTCTGTGATTAGACGCAGACA  250

seq1  CCTCCTCTGCAGAGGAAGGCCTCATTCCTTCATTACACATGGACCTATCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCTGCAGAGGAAGGCCTCATTCCTTCATTACACATGGACCTATCT  300

seq1  TTAACTGAAGGGTTGCTTTGATTTACAGATGCCTGGGGGTAATCACCAGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTGAAGGGTTGCTTTGATTTACAGATGCCTGGGGGTAATCACCAGA  350

seq1  CTAGATAGCTCCGAAGTCACCAGGGCTCTTCTCGGAAAGTCCCTCTCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATAGCTCCGAAGTCACCAGGGCTCTTCTCGGAAAGTCCCTCTCTTA  400

seq1  AGATGTGGCCTCCACTCTGGCCTGCAAAATATCACATGCCCAACCTCTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTGGCCTCCACTCTGGCCTGCAAAATATCACATGCCCAACCTCTTG  450

seq1  CAGTTGCTAGTCCCCCAGCAAAATGTGCTATTAGTACCCCGGCAAAATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTGCTAGTCCCCCAGCAAAATGTGCTATTAGTACCCCGGCAAAATGT  500

seq1  GCTGCAAATGGAGGAGTTTTTAGTTGATCATCAGAAAATACGTGTCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCAAATGGAGGAGTTTTTAGTTGATCATCAGAAAATACGTGTCTTCT  550

seq1  TCAGAAGAGAAACAAGGGGACGTGTTTAGTTATCGCTTCCACAATTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAGAGAAACAAGGGGACGTGTTTAGTTATCGCTTCCACAATTTCTT  600

seq1  CTTCAAGATTTTTTTCCTTATCATTTATTAGGAACAATTGAAAGTATTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGATTTTTTTCCTTATCATTTATTAGGAACAATTGAAAGTATTCC  650

seq1  TTTAAAACTGTGACTCGGTGGGCTAGGAAGATGGCTTAGTGCAAAAGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAACTGTGACTCGGTGGGCTAGGAAGATGGCTTAGTGCAAAAGAGG  700

seq1  GCTTGCAGTGCAAACAGGGGAGGCTGAGTTCAAATCCCCAGCGTTCAGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCAGTGCAAACAGGGGAGGCTGAGTTCAAATCCCCAGCGTTCAGAT  750

seq1  AAAAGCGAGACATGGCTTGTGTGTACCTGTGATCACAGTGTTGGGAGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCGAGACATGGCTTGTGTGTACCTGTGATCACAGTGTTGGGAGGCA  800

seq1  GAAATGAGTGGATCTGGGAAGCTCTCTGGCCAGTTAAGCTAGTCAAAATG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAGTGGATCTGGGAAGCTCTCTGGCCAGTTAAGCTAGTCAAAATG  850

seq1  GCAAGCTTTATGCTCAGTAAGAGATTCTGCCGTGTGGGTATAAAGAAGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCTTTATGCTCAGTAAGAGATTCTGCCGTGTGGGTATAAAGAAGAC  900

seq1  CATTTCTTCTGTGCGTGCACAGGAATGTACACATTCACACACCCACACTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTTCTGTGCGTGCACAGGAATGTACACATTCACACACCCACACTA  950

seq1  CACAAAAGGAAAAAAAAAAACAAAGAAAAAAATCTTGGAAAGCTTCTAAA  1000
      ||| ||||||||||||||    ||| ||||||||||||||||||||||||
seq2  CAC-AAAGGAAAAAAAAA---CAAGGAAAAAATCTTGGAAAGCTTCTAAA  996

seq1  CAAAAAGGGCTTGAACATACTCTAAATGTAGCTGTTTAATTGTGATCAGA  1050
      ||||||||   || ||||||||||||||||||||||  | ||||||||||
seq2  CAAAAAGG--CTGGACATACTCTAAATGTAGCTGTT--AATGTGATCAGA  1042

seq1  TTTAAACTCTCAGCTTTGTGGGCACCCTCAAATTAAAGTCCCATATCTTC  1100
        |||||||||||||| |||||||||  |||||  |||| ||| ||||||
seq2  --TAAACTCTCAGCTTGGTGGGCACCTCCAAAT--AAGTTCCA-ATCTTC  1087

seq1  ATACT-GTATCTTTATTATAGAAACTGCTCGCACACACACTTTCCACAGA  1149
      ||||| |||||||||||||   ||||||||||   ||| |  |||||   
seq2  ATACTGGTATCTTTATTAT--GAACTGCTCGC---CAC-CAGTCCAC--G  1129

seq1  ATCCAAATCTGAG-GAAAGTAGTATGGTGAGAAAAG-TATGGATTTTTG  1196
      |||  |||  ||| | ||||  |||||||||||||| |||||| |||||
seq2  ATC--AATTGGAGAGGAAGTGATATGGTGAGAAAAGATATGGAATTTTG  1176