BAC Information

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BAC

Clone NameB6Ng01-130G18
Chromosome6 (Build37)
Map Location 130,057,909 - 130,244,434
singlet/doubletdoublet
Overlap geneLOC100038894, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13
Upstream geneKlrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038895, Klra4, LOC667769
Downstream geneKlra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473, LOC640779, LOC667793, EG667798, EG625558, LOC625566, EG636947, LOC625628, EG625648, LOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130G18.bB6Ng01-130G18.g
ACCDH931741DH931742
length1,0891,192
definitionDH931741|Mus musculus domesticus DNA, BAC clone: B6Ng01-130G18, 5' end.DH931742|Mus musculus domesticus DNA, BAC clone: B6Ng01-130G18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(130,057,909 - 130,059,020)(130,243,239 - 130,244,434)
sequence
gaattctttgtttagctctgcaccccgtttttaatagggttatttggttt
tctggagtctaacttcttgagttctttgtatatattgggtattaaccctt
tattgtctttaggattggtaaagatcttttcccaatatgttgattgcctt
tttgtctactgacagtgtcctttgccctacagatgctttccaattttatg
agatcctatttgacaattcttagagcatacacctttgctgtcctgttcag
gaaatttccccctgtgaacctgtattggaggcttttctcaaaatctattc
tactatttttaacaccacttcatggtaaaagtcattgaaagattaggact
tcaaggcccataactaaacatagtaaaaacaatatacaccaaaccagtgg
ccaacatcaaactaaatggaaaaaaaaaaacatgaagcaatcccactaaa
atcaggaactagacaaggctgcccactctttccctatttatttaatatac
ttggattccaatccagagcaattagacaacaaaaggagattaaagggatt
caaatagcactgtaaactgttaagaagctcaatatacaattgttaactgt
gtagcacgtgcacagaactaataaatctttatatatgttgtcttagagtt
actaatttaaaaacaaattgtattcatacacctcttcaaggttcataatc
caatatagttagtaacatttccagatgccctcattgagtcttgggtgtct
cccttatcccaggtctctgtcttactctggacactaaaccaaacaaactt
aagaagaaatgtattatttcatttcgcatgttactactgaatgttaaagg
aatatggaataaaaatttagtgaagttcaaagctgaaacttcagaggact
atttttctgatttgaaacatagctcagtttagctattttcatttcttcct
ttttaataatttatttatatattcacactctctctctctgcatctagctc
acatgtcctactcttttacccttgcatttcctcagaaagggaaacctttc
atgagtagacaaaatactcataagaagggagggattggg
gaattcattatccacatgtctgcatttctctgatgttgggactatggaca
ggggtatcttgttatctattttcacttgaaagatgtccatcatgcctatt
ttgcatgtgaaagtttttaattctgttgtctgtttttattttgttttccc
ctggtacaaatagcagcttcatctgtagaatggatgtcattgctcacgtt
ctgaggattcattctctgtttctcaagtgacacagaaacaaatatataat
cctgaaaaataatacacagcttgttttcactaggatcaaccatttaaaaa
tccactgctttgacagcacacttaattgctaataagtaattttaggtttc
tatacgttagttgggttagtgtttgttaccttttatacatagtataatgt
atacatttaaaattcatttatttgctgtaagatatgtgtttagaattaat
gattagttgcttgagcagttatagcttcttatacaaacttttgtattcta
cacacatccaatctcttttgtattcatttgataaaagttgaaatctcaca
gatacattctctgtagccagctgcttatgtaagctcaagacttacaatca
tacaagtgtatgaatttgtgggcagcctaggtttcatagtatgtttgatg
tcaccgtgtgctacagagttagattctatgtcttaggaagcctaataata
atgatgataatgataataatactaaagctgtctagaacagaaatactttc
aagggtgaagcaatataatgtgtagcatcctactaagcctcaattattca
atatgtatccagtaataagtttttgtccataacccacattattttgcaat
gggttagtgttctggatcgtaccactatcaatatatctttaaattcagaa
tcatacagtggattcacatgtaatgtccttaagtgtgaaatagtttggct
cattgtctgaacattaaattcaaaatccaagcttgaagttgattcttgca
tataaatgcatccaatggaagtcatgaaatatgagtttttataattatgc
aaatattttccgcacccatctacaaacatgtttttaatccacctgaatag
agctcacctgagaggaagaaattgataaagttccccacgatggcaaaaat
gtgagatttagacaaacaaatcttttcttttcccaaattgct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_130057909_130059020
seq2: B6Ng01-130G18.b_45_1133

seq1  GAATTCTTTGTTTAGCTCTGCACCCCGTTTTTAATAGGGTTATTTGGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGCACCCCGTTTTTAATAGGGTTATTTGGTTT  50

seq1  TCTGGAGTCTAACTTCTTGAGTTCTTTGTATATATTGGGTATTAACCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAGTCTAACTTCTTGAGTTCTTTGTATATATTGGGTATTAACCCTT  100

seq1  TATTGTCTTTAGGATTGGTAAAGATCTTTTCCCAATATGTTGATTGCCTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCTTTAGGATTGGTAAAGATCTTTTCCCAATATGTTGATTGCCTT  150

seq1  TTTGTCTACTGACAGTGTCCTTTGCCCTACAGATGCTTTCCAATTTTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTACTGACAGTGTCCTTTGCCCTACAGATGCTTTCCAATTTTATG  200

seq1  AGATCCTATTTGACAATTCTTAGAGCATACACCTTTGCTGTCCTGTTCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCCTATTTGACAATTCTTAGAGCATACACCTTTGCTGTCCTGTTCAG  250

seq1  GAAATTTCCCCCTGTGAACCTGTATTGGAGGCTTTTCTCAAAATCTATTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATTTCCCCCTGTGAACCTGTATTGGAGGCTTTTCTCAAAATCTATTC  300

seq1  TACTATTTTTAACACCACTTCATGGTAAAAGTCATTGAAAGATTAGGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATTTTTAACACCACTTCATGGTAAAAGTCATTGAAAGATTAGGACT  350

seq1  TCAAGGCCCATAACTAAACATAGTAAAAACAATATACACCAAACCAGTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGCCCATAACTAAACATAGTAAAAACAATATACACCAAACCAGTGG  400

seq1  CCAACATCAAACTAAATGGAAAAAAAAAAACATGAAGCAATCCCACTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACATCAAACTAAATGGAAAAAAAAAAACATGAAGCAATCCCACTAAA  450

seq1  ATCAGGAACTAGACAAGGCTGCCCACTCTTTCCCTATTTATTTAATATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGAACTAGACAAGGCTGCCCACTCTTTCCCTATTTATTTAATATAC  500

seq1  TTGGATTCCAATCCAGAGCAATTAGACAACAAAAGGAGATTAAAGGGATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATTCCAATCCAGAGCAATTAGACAACAAAAGGAGATTAAAGGGATT  550

seq1  CAAATAGCACTGTAAACTGTTAAGAAGCTCAATATACAATTGTTAACTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAGCACTGTAAACTGTTAAGAAGCTCAATATACAATTGTTAACTGT  600

seq1  GTAGCACGTGCACAGAACTAATAAATCTTTATATATGTTGTCTTAGAGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCACGTGCACAGAACTAATAAATCTTTATATATGTTGTCTTAGAGTT  650

seq1  ACTAATTTAAAAACAAATTGTATTCATACACCTCTTCAAGGTTCATAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAATTTAAAAACAAATTGTATTCATACACCTCTTCAAGGTTCATAATC  700

seq1  CAATATAGTTAGTAACATTTCCAGATGCCCTCATTGAGTCTTGGGTGTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATAGTTAGTAACATTTCCAGATGCCCTCATTGAGTCTTGGGTGTCT  750

seq1  CCCTTATCCCAGGTCTCTGTCTTACTCTGGACACTAAACCAAACAAACTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTATCCCAGGTCTCTGTCTTACTCTGGACACTAAACCAAACAAACTT  800

seq1  AAGAAGAAATGTATTATTTCATTTCGCATGTTACTACTGAATGTTAAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGAAATGTATTATTTCATTTCGCATGTTACTACTGAATGTTAAAGG  850

seq1  AATATGGAATAAAAATTTAGGTGAAGGTTCAAAGCTGAAACTTCAGAGGA  900
      ||||||||||||||||||| ||||| ||||||||||||||||||||||| 
seq2  AATATGGAATAAAAATTTA-GTGAA-GTTCAAAGCTGAAACTTCAGAGG-  897

seq1  ACTATTTTTCTGATTTGAAACATAGCTCAGGTTTAGCTATTTTTCATTTC  950
      ||||||||||||||||||||||||||||| ||||||||| ||||||||||
seq2  ACTATTTTTCTGATTTGAAACATAGCTCA-GTTTAGCTA-TTTTCATTTC  945

seq1  TTCCTTTTTTAAATAATTTATTTATATATTCACCACTCTCTCTTCTCCTG  1000
      |||||||||  ||||||||||||||||||||| ||||||||| ||| |||
seq2  TTCCTTTTT--AATAATTTATTTATATATTCA-CACTCTCTC-TCT-CTG  990

seq1  CCATTCCTAGGCTCACATGTCCCTACTCTTTTTAACCCTTTGCCATTTCC  1050
       |||  ||| |||||||||| |||||||||||  ||||||   |||||||
seq2  -CAT--CTA-GCTCACATGT-CCTACTCTTTT--ACCCTT--GCATTTCC  1031

seq1  TCAGAAAAGGGGAAACCTTTCATGAGTAAGAACAAAATACTCATAGGAGG  1100
      |||||||  |||||||||||||||||||   |||||||||||||| || |
seq2  TCAGAAA--GGGAAACCTTTCATGAGTA--GACAAAATACTCATAAGAAG  1077

seq1  GAGGGGATTGGG  1112
      |  |||||||||
seq2  GGAGGGATTGGG  1089

seq1: chr6_130243239_130244434
seq2: B6Ng01-130G18.g_65_1256 (reverse)

seq1  AGCAATTTGGGAAAAGAAAGGATTTGTTTTGCTTAAACTTCCACATTATT  50
      ||||||||||||||||||| |||||||||  || || ||  |||||| ||
seq2  AGCAATTTGGGAAAAGAAAAGATTTGTTTGTCTAAATCT--CACATTTTT  48

seq1  GCCCATCGTTGAGGAACTTTCTCAATTTCTTCCTCTCAGGTGACTTCTA-  99
      | |||||| || |||||||| ||||||||||||||||||||||  |||| 
seq2  G-CCATCG-TGGGGAACTTTATCAATTTCTTCCTCTCAGGTGAGCTCTAT  96

seq1  TCAAGTGGATATAAAACTAGTTTGTAGAATGGTGCTGAAAATATGTGCAT  149
      ||| ||||||  |||||  |||||||||  ||||| |||||||| |||||
seq2  TCAGGTGGATTAAAAACATGTTTGTAGATGGGTGCGGAAAATATTTGCAT  146

seq1  AATTATAAAAACTCATATTTTCATGACTTCCAGTGGATGCATTTATATGC  199
      ||||||||||||||||| |||||||||||||| |||||||||||||||||
seq2  AATTATAAAAACTCATA-TTTCATGACTTCCATTGGATGCATTTATATGC  195

seq1  -AGACTCAACTTCAAGGCTTGGATTTTTGAATTTAATTGTCAGACAATGA  248
       ||| |||||||||| ||||||| |||||||||||||  |||||||||||
seq2  AAGAATCAACTTCAA-GCTTGGA-TTTTGAATTTAATGTTCAGACAATGA  243

seq1  GCCAAACTATTTCACAACTTAAGGACATTACATGTGAATCCACTGTATGA  298
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GCCAAACTATTTCAC-ACTTAAGGACATTACATGTGAATCCACTGTATGA  292

seq1  TTCTGAATTTAAAGATATATTGATAGTGGTACGATCCAGAACACTAA-CC  347
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTCTGAATTTAAAGATATATTGATAGTGGTACGATCCAGAACACTAACCC  342

seq1  ATTGC-AAATAATGTGGGTTATGGACAAAAACTTATTACTGGATACATAT  396
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAAAATAATGTGGGTTATGGACAAAAACTTATTACTGGATACATAT  392

seq1  TGAATAATTGAGGCTTAGTAGGATGCTACACATTATATTGCTTCACCCTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAATTGAGGCTTAGTAGGATGCTACACATTATATTGCTTCACCCTT  442

seq1  GAAAGTATTTCTGTTCTAGACAGCTTTAGTATTATTATCATTATCATCAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTATTTCTGTTCTAGACAGCTTTAGTATTATTATCATTATCATCAT  492

seq1  TATTATTAGGCTTCCTAAGACATAGAATCTAACTCTGTAGCACACGGTGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTAGGCTTCCTAAGACATAGAATCTAACTCTGTAGCACACGGTGA  542

seq1  CATCAAACATACTATGAAACCTAGGCTGCCCACAAATTCATACACTTGTA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAACATACTATGAAACCTAGGCTGCCCACAAATTCATACACTTGTA  592

seq1  TGATTGTAAGTCTTGAGCTTACATAAGCAGCTGGCTACAGAGAATGTATC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGTAAGTCTTGAGCTTACATAAGCAGCTGGCTACAGAGAATGTATC  642

seq1  TGTGAGATTTCAACTTTTATCAAATGAATACAAAAGAGATTGGATGTGTG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGATTTCAACTTTTATCAAATGAATACAAAAGAGATTGGATGTGTG  692

seq1  TAGAATACAAAAGTTTGTATAAGAAGCTATAACTGCTCAAGCAACTAATC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATACAAAAGTTTGTATAAGAAGCTATAACTGCTCAAGCAACTAATC  742

seq1  ATTAATTCTAAACACATATCTTACAGCAAATAAATGAATTTTAAATGTAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATTCTAAACACATATCTTACAGCAAATAAATGAATTTTAAATGTAT  792

seq1  ACATTATACTATGTATAAAAGGTAACAAACACTAACCCAACTAACGTATA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATACTATGTATAAAAGGTAACAAACACTAACCCAACTAACGTATA  842

seq1  GAAACCTAAAATTACTTATTAGCAATTAAGTGTGCTGTCAAAGCAGTGGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCTAAAATTACTTATTAGCAATTAAGTGTGCTGTCAAAGCAGTGGA  892

seq1  TTTTTAAATGGTTGATCCTAGTGAAAACAAGCTGTGTATTATTTTTCAGG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAATGGTTGATCCTAGTGAAAACAAGCTGTGTATTATTTTTCAGG  942

seq1  ATTATATATTTGTTTCTGTGTCACTTGAGAAACAGAGAATGAATCCTCAG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATATATTTGTTTCTGTGTCACTTGAGAAACAGAGAATGAATCCTCAG  992

seq1  AACGTGAGCAATGACATCCATTCTACAGATGAAGCTGCTATTTGTACCAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGAGCAATGACATCCATTCTACAGATGAAGCTGCTATTTGTACCAG  1042

seq1  GGGAAAACAAAATAAAAACAGACAACAGAATTAAAAACTTTCACATGCAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAACAAAATAAAAACAGACAACAGAATTAAAAACTTTCACATGCAA  1092

seq1  AATAGGCATGATGGACATCTTTCAAGTGAAAATAGATAACAAGATACCCC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGCATGATGGACATCTTTCAAGTGAAAATAGATAACAAGATACCCC  1142

seq1  TGTCCATAGTCCCAACATCAGAGAAATGCAGACATGTGGATAATGAATTC  1196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCATAGTCCCAACATCAGAGAAATGCAGACATGTGGATAATGAATTC  1192