BAC Information

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BAC

Clone NameB6Ng01-130O10
Chromosome6 (Build37)
Map Location 147,156,661 - 147,312,904
singlet/doubletdoublet
Overlap genePthlh
Upstream geneItpr2, 4933424B01Rik, Fgfr1op2, Tm7sf3, Surb7, EG626175, Stk38l, LOC621842, Arntl2, 1700023A16Rik, Ppfibp1, 1700034J05Rik, 2210417D09Rik, Mrps35, EG545893, Klhdc5, EG665288, LOC100039641
Downstream geneEG622129, Ccdc91, LOC100039712, LOC100039727, LOC100039736, Mlstd1, Ergic2, Tmtc1, 1110033J19Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-130O10.bB6Ng01-130O10.g
ACCDH932096DH932097
length1,209451
definitionDH932096|Mus musculus domesticus DNA, BAC clone: B6Ng01-130O10, 5' end.DH932097|Mus musculus domesticus DNA, BAC clone: B6Ng01-130O10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(147,311,683 - 147,312,904)(147,156,661 - 147,157,117)
sequence
gaattccagccggaggctaggcatatctgtacctaacaatgcatttctgt
aatgctgggtgttaggcaaaggcttggttacttccagtttagcaattgca
tagctctctcactcaacttctgagtgggattaggcccctgcttaggccca
ccatgactttgtgatgctagattgctaaaaaaaaaaaaaataataaaaaa
aaagaaagaaagagagagagagagacagcttctcacacaccccaggcaca
agacaggtaactataaagagactgagagacagccgtaggcaccctgtttc
acacacccatcatggggcaggaaaacagatcttagagtttcgctattcac
aaagaaagagaagaacccggcttcccttgtgtctctgcacctagagtcct
ctgtctctgaggtaggagagacagggataattaccaaactcttccatctt
acttccctcatctatgtaaaggaagcttgactccaaatgtctatgcttat
agtcttaaattcttaattattattacttaagaatggggagcagtatctca
aggagaaagcacacaaagatggatttaaatggtggggagacagttgggga
agttcccaatctgcagacaagagcctccttagcctttgtaactggagagc
tgtcaggaaaccatgggctcccaaaaggagaggagaatgggtgtgtacag
aagtcacacaggcagcatgaatatttgcccccaaaacttcagagactcca
cacagctggatgtgtggtacggcaggcttctctgaagagtgtgtgtatct
ttttcagacatgccataaatactaaatcctctgttgcacatgtatcttag
aaaggtcaagaatattaggacagattcaaaagcaaccccaggctaagcta
atacaaggtcattaagaatctctatttgagctgaactccagctgagtgcc
catcaactgttctgtgaaggacatcttaaaactggaccgtatcgaaatac
aatatgcctgctgtgcgggacgaagtcagagtctgtaaccacagtattct
ctgtgaggaaacagacttcctgtctattttttagtggcccaattaagtgc
agatttgcttgctgaacactaactgcagcatatatttttttgtgtccgaa
aatcaagagtgacttacaaaaaccctaaacaggaagagccggctctcata
aaggcaatt
cctggactgacataaattaatgtctcatagttccggttccaactccgaga
tcacagcatggaaagagctggcatctgctgccggcctgattcacaggtgg
ttgtattctgtttagttcctgtctaataaaacactaggaagttctctggg
gtcccttttccttctttttctctcagtgtggtgtttttaacttctaaggt
tcctgggaccactcatagagcctccttccttctgacctaatgacctctca
aaggctttgcatttaggatttccacacataaaactttgcatctcataagc
ctgcagtccacctgcttgactagtgtgaaaagctgcccaggtgtagtccc
cggaggacaataatagaaggcagtggagagcaggtgagactcccttgcac
acaatatgctcaaggcattctggaaggcagctggtgggggtggggtgggg
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_147311683_147312904
seq2: B6Ng01-130O10.b_49_1257 (reverse)

seq1  AATTGCCTTCTTGGAAGACCGCTCTTTCCTTGTTTA-GTTTTTTGTAGTT  49
      |||||||||  ||  || | ||||||  | |||||| | ||||||||  |
seq2  AATTGCCTTTATGAGAGCCGGCTCTT--CCTGTTTAGGGTTTTTGTAAGT  48

seq1  CACTTCTTGGTTTTTCTGGACACAAAAAAATA-ATGCTGCAGTTAGGTTG  98
      ||| ||||| ||||   ||||||||||||||| |||||||||||||  ||
seq2  CAC-TCTTGATTTT--CGGACACAAAAAAATATATGCTGCAGTTAG--TG  93

seq1  CTCAGCCAGCCAAAAATCTGCACTTAATTGGGCACATAAAAAATAGACAG  148
       ||||| |||   ||||||||||||||||||||   ||||||||||||||
seq2  TTCAGCAAGC---AAATCTGCACTTAATTGGGCCACTAAAAAATAGACAG  140

seq1  GAAGTCTGTTTCCTCACAGAG-ATACTGTGGTTTACAGACTCTGACTTCG  197
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  GAAGTCTGTTTCCTCACAGAGAATACTGTGG-TTACAGACTCTGACTTCG  189

seq1  TCCCGCACAGCCAGGCATTATTGTATTTTCGATACGGTCCCGGTTTTAAG  247
      |||||||||| |||||| ||||||| |||||||||||| || ||||||||
seq2  TCCCGCACAG-CAGGCA-TATTGTA-TTTCGATACGGT-CCAGTTTTAAG  235

seq1  ATGTCCCTCACAAGAACAGTTGATGGGCCACTCAGCTGGAG-TCAGCTCA  296
      |||||| |||| ||||||||||||||| ||||||||||||| ||||||||
seq2  ATGTCCTTCAC-AGAACAGTTGATGGG-CACTCAGCTGGAGTTCAGCTCA  283

seq1  AATAGAGATTCTTAATGACCTTGTATTAGCTTAGCCTGGGGTTGCTTTTG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGATTCTTAATGACCTTGTATTAGCTTAGCCTGGGGTTGCTTTTG  333

seq1  AATCTGTCCTAATATTCTTGACCTTTCT-AGATACATGTGCAACAGAGGA  395
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AATCTGTCCTAATATTCTTGACCTTTCTAAGATACATGTGCAACAGAGGA  383

seq1  TTTAGTATTTATGGCATGTCCTGAAAAAGATACACACACTCTTCAGAGAA  445
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTTAGTATTTATGGCATGT-CTGAAAAAGATACACACACTCTTCAGAGAA  432

seq1  GCCTGCCGTACCACACATCCAGCTGTGTGGAGTCTCTGAAGTTTTGGGGG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCCGTACCACACATCCAGCTGTGTGGAGTCTCTGAAGTTTTGGGGG  482

seq1  CAAATATTCATGCTGCCTGTGTGACTTCTGTACACACCCATTCTCCTCTC  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATATTCATGCTGCCTGTGTGACTTCTGTACACACCCATTCTCCTCTC  532

seq1  CTTTTGGGAGCCCATGGTTTCCTGACAGCTCTCCAGTTACAAAGGCTAAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGGGAGCCCATGGTTTCCTGACAGCTCTCCAGTTACAAAGGCTAAG  582

seq1  GAGGCTCTTGTCTGCAGATTGGGAACTTCCCCAACTGTCTCCCCACCATT  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTCTTGTCTGCAGATTGGGAACTTCCCCAACTGTCTCCCCACCATT  632

seq1  TAAATCCATCTTTGTGTGCTTTCTCCTTGAGATACTGCTCCCCATTCTTA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCCATCTTTGTGTGCTTTCTCCTTGAGATACTGCTCCCCATTCTTA  682

seq1  AGTAATAATAATTAAGAATTTAAGACTATAAGCATAGACATTTGGAGTCA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATAATAATTAAGAATTTAAGACTATAAGCATAGACATTTGGAGTCA  732

seq1  AGCTTCCTTTACATAGATGAGGGAAGTAAGATGGAAGAGTTTGGTAATTA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTCCTTTACATAGATGAGGGAAGTAAGATGGAAGAGTTTGGTAATTA  782

seq1  TCCCTGTCTCTCCTACCTCAGAGACAGAGGACTCTAGGTGCAGAGACACA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTCTCTCCTACCTCAGAGACAGAGGACTCTAGGTGCAGAGACACA  832

seq1  AGGGAAGCCGGGTTCTTCTCTTTCTTTGTGAATAGCGAAACTCTAAGATC  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGCCGGGTTCTTCTCTTTCTTTGTGAATAGCGAAACTCTAAGATC  882

seq1  TGTTTTCCTGCCCCATGATGGGTGTGTGAAACAGGGTGCCTACGGCTGTC  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCCTGCCCCATGATGGGTGTGTGAAACAGGGTGCCTACGGCTGTC  932

seq1  TCTCAGTCTCTTTATAGTTACCTGTCTTGTGCCTGGGGTGTGTGAGAAGC  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGTCTCTTTATAGTTACCTGTCTTGTGCCTGGGGTGTGTGAGAAGC  982

seq1  TGTCTCTCTCTCTCTCTTTCTTTCTTTTTTTTTATTATTTTTTTTTTTTT  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTCTCTCTCTCTTTCTTTCTTTTTTTTTATTATTTTTTTTTTTTT  1032

seq1  TAGCAATCTAGCATCACAAAGTCATGGTGGGCCTAAGCAGGGGCCTAATC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATCTAGCATCACAAAGTCATGGTGGGCCTAAGCAGGGGCCTAATC  1082

seq1  CCACTCAGAAGTTGAGTGAGAGAGCTATGCAATTGCTAAACTGGAAGTAA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCAGAAGTTGAGTGAGAGAGCTATGCAATTGCTAAACTGGAAGTAA  1132

seq1  CCAAGCCTTTGCCTAACACCCAGCATTACAGAAATGCATTGTTAGGTACA  1195
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCCTTTGCCTAACACCCAGCATTACAGAAATGCATTGTTAGGTACA  1182

seq1  GATATGCCTAGCCTCCGGCTGGAATTC  1222
      |||||||||||||||||||||||||||
seq2  GATATGCCTAGCCTCCGGCTGGAATTC  1209

seq1: chr6_147156661_147157117
seq2: B6Ng01-130O10.g_70_526

seq1  GAATTCCCTGGACTGACATAAATTAATGTCTCATAGTTCCGGTTCCAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCTGGACTGACATAAATTAATGTCTCATAGTTCCGGTTCCAACT  50

seq1  CCGAGATCACAGCATGGAAAGAGCTGGCATCTGCTGCCGGCCTGATTCAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGATCACAGCATGGAAAGAGCTGGCATCTGCTGCCGGCCTGATTCAC  100

seq1  AGGTGGTTGTATTCTGTTTAGTTCCTGTCTAATAAAACACTAGGAAGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTTGTATTCTGTTTAGTTCCTGTCTAATAAAACACTAGGAAGTTC  150

seq1  TCTGGGGTCCCTTTTCCTTCTTTTTCTCTCAGTGTGGTGTTTTTAACTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGTCCCTTTTCCTTCTTTTTCTCTCAGTGTGGTGTTTTTAACTTC  200

seq1  TAAGGTTCCTGGGACCACTCATAGAGCCTCCTTCCTTCTGACCTAATGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTTCCTGGGACCACTCATAGAGCCTCCTTCCTTCTGACCTAATGAC  250

seq1  CTCTCAAAGGCTTTGCATTTAGGATTTCCACACATAAAACTTTGCATCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCAAAGGCTTTGCATTTAGGATTTCCACACATAAAACTTTGCATCTC  300

seq1  ATAAGCCTGCAGTCCACCTGCTTGACTAGTGTGAAAAGCTGCCCAGGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCCTGCAGTCCACCTGCTTGACTAGTGTGAAAAGCTGCCCAGGTGT  350

seq1  AGTCCCCGGAGGACAATAATAGAAGGCAGTGGAGAGCAGGTGAGACTCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCCGGAGGACAATAATAGAAGGCAGTGGAGAGCAGGTGAGACTCCC  400

seq1  TTGCACACAATATGCTCAAGGCATTCTGGAAGGCAGCTGGTGGGGGTGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCACACAATATGCTCAAGGCATTCTGGAAGGCAGCTGGTGGGGGTGGG  450

seq1  GTGGGGA  457
      |||||||
seq2  GTGGGGA  457