BAC Information

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BAC

Clone NameB6Ng01-131G14
Chromosome6 (Build37)
Map Location 89,968,659 - 89,969,195
singlet/doubletsinglet
Overlap genenone
Upstream gene4933427D06Rik, Gm1965, LOC100043153, LOC100043159, EG624483, EG624491, LOC665547, EG624537, Gm839, 4930512J16Rik, Plxna1, Chchd6, Txnrd3, V1r-ps1, V1rb7, V1rb9, V1r-ps2, V1r-ps3, V1ra6, V1ra5, V1rb4, V1r-ps4, V1ra2, V1rb8
Downstream geneV1ra4, V1ra3, V1rb2, V1rb1, V1ra1, LOC625050, V1ra7, V1ra8, V1rb3, LOC100043191, V1r-ps5, V1ra9, BC048671, Chst13, Uroc1, Zxdc, Ccdc37, Klf15, Aldh1l1, Slc41a3, Iqsec1, LOC100043646, EG665685, Nup210
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131G14.bB6Ng01-131G14.g
ACCDH932474DH932475
length1,268527
definitionDH932474|Mus musculus domesticus DNA, BAC clone: B6Ng01-131G14, 5' end.DH932475|Mus musculus domesticus DNA, BAC clone: B6Ng01-131G14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatgaaaatgaatgcacaacatatacaaacttaagggatacatt
gaaagcagtggtaagcgtaaagttcctagcactaagtgccttcataagga
aattagtgaattctctggctgcagagatggcttaccagttaagagcatta
ccttttcttccaatggtcctgggttcaactcccaactctcatgtgtcagc
ccacaagtgtttttaacttcagttcgaggacatacaacaccctcacaaag
acatacatgcacagaatacattaatgcatatcaaaaatgaaaaaaaaatc
attaaaaataatttaaaagtatgcatctgactctttcagctgctagttgg
gcctctcaaagtgcagctatcctaggttgctctctgtacgcataccatac
tatcagtaatggtgtcaggccttggagcctccccttgatctggatcccaa
tttggacctgtcaatagacctcatttctctcaggatcttcttcatttttt
ccttgaagttctattagacaggaagaagtcagggtcagagttttgactgt
gggatggcatcccaccactccacttgatgtgccgtctttctacttgagat
ggactcctcaatttccctctccactgttgggcatttcatctaaggtctct
ccctttgagtcctgaccatccctctcctcccatgtttcttgtaccttcta
gagggtccctatacctcccttagggaaagactggaagatgctgaggtgga
gggccactccaaaggaagaccagtagtcccaactaacctgaaccacacag
atctctcagacactgaggcaacaaccaggcagcatacaccagctaatatg
aggctcccaacacatatgcagcagaagactgcctggtcttatcacagtag
agaacatgcacctaactctggagagatttgaggacccaggtattggggag
gtctggtacactgagtttttgcatggggacatttcatagatgtatgggga
acagataggggtgaggaagagtagaggtgcacctgggagagggataacac
ctgactgcataagactactcatgataataaaggaataaaagtagaaaggt
agaatgaagtaagatatataatgaatcagcacgcgatcgatgatataaat
tctgctgtcatgaatgttcctaatctatatgcaacaatgttatgcggtac
ttacatggagagagtggtacctgacagtggagtgcaactactcactagcg
tcacttattataggtcat
tcatacttcttaatcagctggtgccaacatgcacatgatgccagctacta
ttttaagctccacgggtgtgtttaaaacattcacctgcctctcagtgcac
acaaatcacaaaatgaaattcagagtgtgagcttcctgtgacatttgtcc
cataaagcaactgccagtttccttgtccattgggaaacagaagtatatct
ttctactccctactatgttctgattcttatgactgggatttggaaaacaa
acccataagttttataaagaacttcacaattaaatggtaacaattaagca
tcatccattatatatatatatatatatatatatatatatatatatatata
tatacccatacatatacacatacacatacatatacatatgtgtgtgtgtg
tgagaaagagagagagagagagagagagagagagagagagagagagagag
acctatctagaatacatgatccataattttataaaggattaaccttttct
aaaaatgctacagaaattttgtttcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_89968659_89969195
seq2: B6Ng01-131G14.g_69_601

seq1  GAATTCTCATACTTCTTAATCAGCTGGTGCCAACATGCACATGATGCCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATACTTCTTAATCAGCTGGTGCCAACATGCACATGATGCCAG  50

seq1  CTACTATTTTAAGCTCCACGGGTGTGTTTAAAACATTCACCTGCCTCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTATTTTAAGCTCCACGGGTGTGTTTAAAACATTCACCTGCCTCTCA  100

seq1  GTGCACACAAATCACAAAATGAAATTCAGAGTGTGAGCTTCCTGTGACAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCACACAAATCACAAAATGAAATTCAGAGTGTGAGCTTCCTGTGACAT  150

seq1  TTGTCCCATAAAGCAACTGCCAGTTTCCTTGTCCATTGGGAAACAGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCCATAAAGCAACTGCCAGTTTCCTTGTCCATTGGGAAACAGAAGT  200

seq1  ATATCTTTCTACTCCCTACTATGTTCTGATTCTTATGACTGGGATTTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTTCTACTCCCTACTATGTTCTGATTCTTATGACTGGGATTTGGA  250

seq1  AAACAAACCCATAAGTTTTATAAAGAACTTCACAATTAAATGGTAACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAACCCATAAGTTTTATAAAGAACTTCACAATTAAATGGTAACAAT  300

seq1  TAAGCATCATCCATTATATATATATATATATATATATATATATATATATA  350
      ||||||||||||||    ||||||||||||||||||||||||||||||||
seq2  TAAGCATCATCCAT----TATATATATATATATATATATATATATATATA  346

seq1  TATATATATATATACCCATACATATACACATACACATACATATACATATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATACCCATACATATACACATACACATACATATACATATG  396

seq1  TGTGTGTGTGTGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGTGTGAGAAAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG  446

seq1  AGAGAGAGAGACCTATCTAGAATACATGATCCATAATTTTATAAAGGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGACCTATCTAGAATACATGATCCATAATTTTATAAAGGATT  496

seq1  AACCTTTTCTAAAAATGCTACAGAATTTTTGTTTCAG  537
      ||||||||||||||||||||||||| |||||||||||
seq2  AACCTTTTCTAAAAATGCTACAGAAATTTTGTTTCAG  533