BAC Information

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BAC

Clone NameB6Ng01-131O02
Chromosome6 (Build37)
Map Location 64,381,866 - 64,492,640
singlet/doubletdoublet
Overlap geneGrid2
Upstream genenone
Downstream geneAtoh1, LOC100041833, LOC667115, Smarcad1, Ptgds2, LOC100042741, LOC100041858, LOC634745, EG667141, C130060K24Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-131O02.bB6Ng01-131O02.g
ACCDH932826DH932827
length7941,150
definitionDH932826|Mus musculus domesticus DNA, BAC clone: B6Ng01-131O02, 5' end.DH932827|Mus musculus domesticus DNA, BAC clone: B6Ng01-131O02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,381,866 - 64,382,659)(64,491,486 - 64,492,640)
sequence
gaattcctacttcgccaggcatggtggtgcacgcctttaatcccagcact
tgggaggcagaggcaggcaaatttctgagttcggggccagcctggtctac
agagtgagttccaggacagccagggctatacagagaaaccctgtctcgaa
aaacccaatcaatcaatcaatcaatcaatcaataagaataagaataaaaa
taaagccactcgtgttgtctctcttctgtaattccagcatttcagaggct
gaaccaagaggattgtgagttctagaacagccaaggacacataacaagat
cctatctcaaaaaacctaaaattaaataagtaatagtgatgaaataatag
gatctatgtaaagcttcaataaataatatgagcagaaatgtaaacctatc
ttttaagatagttcgggagattaataaaagaatagatatgtgaggaatta
gtagctacgaaactgtattgttttctacttcctcttttaacttaaaatta
tagtatagattttaaaaacagaccaagggcctctcctcccaataatggcc
gactaggccatcttctgctacatatgcagctagagacacaagctctaggg
ttactggttagctcatattattgttcctcctgaagggttgcaaacccctt
cagctccttgggtactttctctagctcctccattgggggccctgtgttcc
atccaatagattatatgccccagtacaggggaatgccagggccaggaagc
gggagcgggtgggttggggagcagggtggggaaggttatggggg
gaattctatatgtttatttcataaccctagattttcccagacattcaagg
catctatttaaatacatttgttctattttttccctcctgggtctattgtt
ttattgggcagtttcaatattctggtactacataagcttttcctcttact
cagacactggagtctgtaataatagcaatcaagacagttcattctgacaa
atgtgtgtcagaaagagcctgctgtggctttgaaatattgaaagtgactg
ataacataatgtgtagagcagaataaatgcatacaaatgggagttttagc
tgagcagtcagaggatgaactaaatacagtgtcagaactcggccctgaaa
gctcctgatgccagtggttacaatggcaaattactaaatgcactttgcaa
aaatgttttatgaataaagcagaggtcagagagttatcatccctctttgt
gcctctgcatctatggaaaacgcagcgaggtgatgttcctttaaaaactt
tctggcatgaaaagtcagacattgtttaagacgataaaaaggtagtaaag
ggcaattgagaaatatgattagaaagttgacatgagcattaagtgttgaa
agtgacaaagctggctagtggacagccagggttacatcaaacccactaca
gtagtcatctcactatgtctacatatcaccactggcaaaccatagtccaa
actataaattgaaaaattataaaaagcagtccaaaatattaattgaaaat
ttctaaaaataaggaattctaagtttcaaatcgcatgccatcatggtata
acctgatgctgtcttgtattgttctgttcaggatgtgaaatcacgtgttt
gtcctttgtatccacactgcatattctactcactcttgccagtatcctta
ggctgaataaggctgttgcaatagcaaagtgctggtaaaggagtaaccct
catttacttaattatggccacaaagttcagactactgaagcaaaaaaggc
atagagcataaaacgcagaaagatggctcactctgatacttaatgcaatg
atacaaagcctatggataaataactacgtaaatatgaaggttagcattat
tgggtggctgtatttatcccactggaacttgagtcagacccccatggatc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_64381866_64382659
seq2: B6Ng01-131O02.b_44_837

seq1  GAATTCCTACTTCGCCAGGCATGGTGGTGCACGCCTTTAATCCCAGCACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTACTTCGCCAGGCATGGTGGTGCACGCCTTTAATCCCAGCACT  50

seq1  TGGGAGGCAGAGGCAGGCAAATTTCTGAGTTCGGGGCCAGCCTGGTCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGCAGAGGCAGGCAAATTTCTGAGTTCGGGGCCAGCCTGGTCTAC  100

seq1  AGAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGAGTTCCAGGACAGCCAGGGCTATACAGAGAAACCCTGTCTCGAA  150

seq1  AAACCCAATCAATCAATCAATCAATCAATCAATAAGAATAAGAATAAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCAATCAATCAATCAATCAATCAATCAATAAGAATAAGAATAAAAA  200

seq1  TAAAGCCACTCGTGTTGTCTCTCTTCTGTAATTCCAGCATTTCAGAGGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCACTCGTGTTGTCTCTCTTCTGTAATTCCAGCATTTCAGAGGCT  250

seq1  GAACCAAGAGGATTGTGAGTTCTAGAACAGCCAAGGACACATAACAAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCAAGAGGATTGTGAGTTCTAGAACAGCCAAGGACACATAACAAGAT  300

seq1  CCTATCTCAAAAAACCTAAAATTAAATAAGTAATAGTGATGAAATAATAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCTCAAAAAACCTAAAATTAAATAAGTAATAGTGATGAAATAATAG  350

seq1  GATCTATGTAAAGCTTCAATAAATAATATGAGCAGAAATGTAAACCTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTATGTAAAGCTTCAATAAATAATATGAGCAGAAATGTAAACCTATC  400

seq1  TTTTAAGATAGTTCGGGAGATTAATAAAAGAATAGATATGTGAGGAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGATAGTTCGGGAGATTAATAAAAGAATAGATATGTGAGGAATTA  450

seq1  GTAGCTACGAAACTGTATTGTTTTCTACTTCCTCTTTTAACTTAAAATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTACGAAACTGTATTGTTTTCTACTTCCTCTTTTAACTTAAAATTA  500

seq1  TAGTATAGATTTTAAAAACAGACCAAGGGCCTCTCCTCCCAATAATGGCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATAGATTTTAAAAACAGACCAAGGGCCTCTCCTCCCAATAATGGCC  550

seq1  GACTAGGCCATCTTCTGCTACATATGCAGCTAGAGACACAAGCTCTAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAGGCCATCTTCTGCTACATATGCAGCTAGAGACACAAGCTCTAGGG  600

seq1  TTACTGGTTAGCTCATATTATTGTTCCTCCTGAAGGGTTGCAAACCCCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGTTAGCTCATATTATTGTTCCTCCTGAAGGGTTGCAAACCCCTT  650

seq1  CAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGTTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGTTCC  700

seq1  ATCCAATAGATTATATGCCCCAGTACAGGGGAATGCCAGGGCCAGGAAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAATAGATTATATGCCCCAGTACAGGGGAATGCCAGGGCCAGGAAGC  750

seq1  GGGAGCGGGTGGGTTGGGGAGCAGGGTGGGGAAGGTTATGGGGG  794
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGCGGGTGGGTTGGGGAGCAGGGTGGGGAAGGTTATGGGGG  794

seq1: chr6_64491486_64492640
seq2: B6Ng01-131O02.g_69_1218 (reverse)

seq1  GATCCATGGGGGATCTGACTCAAGATCCCAAGT-GGATAAATACAGCCA-  48
      |||||||||||| ||||||||||| |||  ||| ||||||||||||||| 
seq2  GATCCATGGGGG-TCTGACTCAAGTTCC--AGTGGGATAAATACAGCCAC  47

seq1  CCAATAATGCTAAACCTCATATTTACGTAGTTATTTATCCATAGGCTTTG  98
      ||||||||||||| | ||||||||||||||||||||||||||||||||||
seq2  CCAATAATGCTAACCTTCATATTTACGTAGTTATTTATCCATAGGCTTTG  97

seq1  TATCATTGGCATGTAAGTATCAGAGTTGAGCCATCTTTCTGCGTTTTATG  148
      ||||||| |||| |||||||||||| ||||||||||||||||||||||||
seq2  TATCATT-GCAT-TAAGTATCAGAG-TGAGCCATCTTTCTGCGTTTTATG  144

seq1  CTCTAATGCCTTTTTTGCTTCAGTAGTCTTGAACTTTGTGGCCATTATTA  198
      |||| ||||||||||||||||||||||| |||||||||||||||| ||||
seq2  CTCT-ATGCCTTTTTTGCTTCAGTAGTC-TGAACTTTGTGGCCATAATTA  192

seq1  AGTAAAATGAGGGTTACTTCTTTACCAGCACTTTGCTATTGCAACAGCCT  248
      ||| |||||||||||||| |||||||||||||||||||||||||||||||
seq2  AGT-AAATGAGGGTTACTCCTTTACCAGCACTTTGCTATTGCAACAGCCT  241

seq1  TA-TCAGCCTAAGGATACTGGCAAGAGTGAGTAGAATATGCAGTGTGGAT  297
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCAGCCTAAGGATACTGGCAAGAGTGAGTAGAATATGCAGTGTGGAT  291

seq1  ACAAAGGACAAACACGTGA-TTCACATCCTGAACAGAACAATACAAGACA  346
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  ACAAAGGACAAACACGTGATTTCACATCCTGAACAGAACAATACAAGACA  341

seq1  GCATCAGGTTATACCATGATGGCATGCGATTTGAAACTTAGAATTCCTTA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAGGTTATACCATGATGGCATGCGATTTGAAACTTAGAATTCCTTA  391

seq1  TTTTTAGAAATTTTCAATTAATATTTTGGACTGCTTTTTATAATTTTTCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGAAATTTTCAATTAATATTTTGGACTGCTTTTTATAATTTTTCA  441

seq1  ATTTATAGTTTGGACTATGGTTTGCCAGTGGTGATATGTAGACATAGTGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATAGTTTGGACTATGGTTTGCCAGTGGTGATATGTAGACATAGTGA  491

seq1  GATGACTACTGTAGTGGGTTTGATGTAACCCTGGCTGTCCACTAGCCAGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACTACTGTAGTGGGTTTGATGTAACCCTGGCTGTCCACTAGCCAGC  541

seq1  TTTGTCACTTTCAACACTTAATGCTCATGTCAACTTTCTAATCATATTTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCACTTTCAACACTTAATGCTCATGTCAACTTTCTAATCATATTTC  591

seq1  TCAATTGCCCTTTACTACCTTTTTATCGTCTTAAACAATGTCTGACTTTT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTGCCCTTTACTACCTTTTTATCGTCTTAAACAATGTCTGACTTTT  641

seq1  CATGCCAGAAAGTTTTTAAAGGAACATCACCTCGCTGCGTTTTCCATAGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCAGAAAGTTTTTAAAGGAACATCACCTCGCTGCGTTTTCCATAGA  691

seq1  TGCAGAGGCACAAAGAGGGATGATAACTCTCTGACCTCTGCTTTATTCAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGGCACAAAGAGGGATGATAACTCTCTGACCTCTGCTTTATTCAT  741

seq1  AAAACATTTTTGCAAAGTGCATTTAGTAATTTGCCATTGTAACCACTGGC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATTTTTGCAAAGTGCATTTAGTAATTTGCCATTGTAACCACTGGC  791

seq1  ATCAGGAGCTTTCAGGGCCGAGTTCTGACACTGTATTTAGTTCATCCTCT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGGAGCTTTCAGGGCCGAGTTCTGACACTGTATTTAGTTCATCCTCT  841

seq1  GACTGCTCAGCTAAAACTCCCATTTGTATGCATTTATTCTGCTCTACACA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGCTCAGCTAAAACTCCCATTTGTATGCATTTATTCTGCTCTACACA  891

seq1  TTATGTTATCAGTCACTTTCAATATTTCAAAGCCACAGCAGGCTCTTTCT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTATCAGTCACTTTCAATATTTCAAAGCCACAGCAGGCTCTTTCT  941

seq1  GACACACATTTGTCAGAATGAACTGTCTTGATTGCTATTATTACAGACTC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACACATTTGTCAGAATGAACTGTCTTGATTGCTATTATTACAGACTC  991

seq1  CAGTGTCTGAGTAAGAGGAAAAGCTTATGTAGTACCAGAATATTGAAACT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTCTGAGTAAGAGGAAAAGCTTATGTAGTACCAGAATATTGAAACT  1041

seq1  GCCCAATAAAACAATAGACCCAGGAGGGAAAAAATAGAACAAATGTATTT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAATAAAACAATAGACCCAGGAGGGAAAAAATAGAACAAATGTATTT  1091

seq1  AAATAGATGCCTTGAATGTCTGGGAAAATCTAGGGTTATGAAATAAACAT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGATGCCTTGAATGTCTGGGAAAATCTAGGGTTATGAAATAAACAT  1141

seq1  ATAGAATTC  1155
      |||||||||
seq2  ATAGAATTC  1150