BAC Information

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BAC

Clone NameB6Ng01-132F22
Chromosome6 (Build37)
Map Location 46,707,899 - 46,780,616
singlet/doubletdoublet
Overlap geneCntnap2
Upstream geneRbpsuh-rs3
Downstream geneLOC622745, LOC100041064, LOC100041078, A930035D04Rik, Cul1, Ezh2, Rn4.5s, EG384379, Pdia4, LOC100041154, Zfp786
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132F22.bB6Ng01-132F22.g
ACCDH933188DH933189
length1,1651,180
definitionDH933188|Mus musculus domesticus DNA, BAC clone: B6Ng01-132F22, 5' end.DH933189|Mus musculus domesticus DNA, BAC clone: B6Ng01-132F22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(46,707,899 - 46,709,073)(46,779,401 - 46,780,616)
sequence
gaattccagtgtggtttgaaatgctgttgtagtctttcggatcccacctg
aatctctgcctctcccaatattttctggcttgccctgatggttcccaaaa
caagactttcatcccaggaaatgctccagagactggatgtctgcctccag
tttcctggacgatgtgtcagactcttcatcttttttcaaaactccttgag
cttcaaaacagtttccctgtttcctacccagatagaacataccagtattc
tcttaattaccaataccagagacccagagtaagttcacaatgtcttttgc
atccccccaccacctgctgcaaatcccactaggccagctaccccaggttc
tttctgctttttcctttctccactcctagtaccacattattagttatctc
ctccatgattagggaacttcatatctgcccttcctaattttatcacgcag
aagctcatcttttatcttacctgagattttttaaaacccaaattgaacag
taaggattctctgctccaaatctttcagtggcctcccattatttcaggat
aagcttcaggtttcttaagctgtaggaaagaagcctggaaaagcaaaaac
tagtcatcgtgaaacaatttctcatttggacaaagacctcatttgctctc
tagtactgtcctctcctgctccgctaccaaactaatctccccagtcctac
tctacgccacatccattctgctgcatatgtcttgcatataaaactcacct
gtatgaattttaacatcctgttccctttgtatatagcattcctttcgtct
cctacaccttggctcactgagatcttgcctgctcaacctacaagacacag
ctcaaaagaaacattcattataacctccttttcctcacaacctctccatg
ttcatagtactcattcatctgtatcctcgacctgcatttctcctccattg
ttctaaaagtgtctcgcagagtgtgccacagaatggaaacacaatggggt
tttgatagtgagcaaaggatgagtacgtgaatggaagagataggatgtgg
gtcaggagctcctatcaatcccaacatctagacatggtactctgggtctt
atattcacggtaggtaactgcatagcctatgtggctgacatcttttcgat
acatatagcattcta
gaattctttaattttggcaaccataaaatattaaacagtaagtaaaatct
ccgtaagagtcctatagtccatgagttggaagagagacgcttgattgtgc
ttcaggttgggaaggctcatcatccagcttcactgacagacaaggggcac
atgaccacagctgggctttcccaaagagcttctcagactaactgcaagat
ttcattagtgaatctacttaccaactgtgtcatggtttaggggtaatcag
aggagagatgggagcttttttgtatcttgttttgcatcctatttaaacat
tgcttaaatggaaacacatcttctgatgtattgtgcttatttcattgaga
gctattctttttgttccccatgccaaagaaataatccccttgagatattt
tccatgagtcctttggaaaacattattgtaaatatacccataaatattca
cttgtgtattttctgcttcttaaaacatgcgaagtaaccaaattctatgt
cataaaattcaaatttaataacgcatatttattgaacttacttgaatata
gttattgtttttatgatggctgaaagaactggtatatatatgagcaaacc
aaagagcaatgtacgctaagtgggctacaaatcctgaatagttttcaaga
tttgcaatgtgcaaaccacgattttcattttactatggaatactttctta
gaaaagaatatctcactataaatgggttctctgttaaatcatgctttaat
tacaaccacaattctcaaatttgagtatattccctgctccagagacatcc
tctgtgtctttctgtgtttacatgtgccccacggatgtccttcaacctgt
atctcaagatacatacactgtggatagttttttggtctttctgcatttca
ttttgtgtcccagggttgtttgtcctagaaccagagaatctgtctctctg
tcagtgagtggctctttgactctgattctgtatctcatataactttcttc
ttgtttttttgggggggggttcagacaggattctctttatagcctggctg
tctagactcacttgaagaacagctgcctcaaactcgaaattcgctgcctg
ccttctgaggctggaataaaggagtgcaccatggctgctctttaacttcc
acatgcacaaaaaagttcagaacaagagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_46707899_46709073
seq2: B6Ng01-132F22.b_51_1215

seq1  GAATTCCAGTGTGGTTTGAAATGCTGTTGTAGTCTTTCGGATCCCACCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTGTGGTTTGAAATGCTGTTGTAGTCTTTCGGATCCCACCTG  50

seq1  AATCTCTGCCTCTCCCAATATTTTCTGGCTTGCCCTGATGGTTCCCAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTCTGCCTCTCCCAATATTTTCTGGCTTGCCCTGATGGTTCCCAAAA  100

seq1  CAAGACTTTCATCCCAGGAAATGCTCCAGAGACTGGATGTCTGCCTCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACTTTCATCCCAGGAAATGCTCCAGAGACTGGATGTCTGCCTCCAG  150

seq1  TTTCCTGGACGATGTGTCAGACTCTTCATCTTTTTTCAAAACTCCTTGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGGACGATGTGTCAGACTCTTCATCTTTTTTCAAAACTCCTTGAG  200

seq1  CTTCAAAACAGTTTCCCTGTTTCCTACCCAGATAGAACATACCAGTATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAACAGTTTCCCTGTTTCCTACCCAGATAGAACATACCAGTATTC  250

seq1  TCTTAATTACCAATACCAGAGACCCAGAGTAAGTTCACAATGTCTTTTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATTACCAATACCAGAGACCCAGAGTAAGTTCACAATGTCTTTTGC  300

seq1  ATCCCCCCACCACCTGCTGCAAATCCCACTAGGCCAGCTACCCCAGGTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCCCACCACCTGCTGCAAATCCCACTAGGCCAGCTACCCCAGGTTC  350

seq1  TTTCTGCTTTTTCCTTTCTCCACTCCTAGTACCACATTATTAGTTATCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCTTTTTCCTTTCTCCACTCCTAGTACCACATTATTAGTTATCTC  400

seq1  CTCCATGATTAGGGAACTTCATATCTGCCCTTCCTAATTTTATCACGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATGATTAGGGAACTTCATATCTGCCCTTCCTAATTTTATCACGCAG  450

seq1  AAGCTCATCTTTTATCTTACCTGAGATTTTTTAAAACCCAAATTGAACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTCATCTTTTATCTTACCTGAGATTTTTTAAAACCCAAATTGAACAG  500

seq1  TAAGGATTCTCTGCTCCAAATCTTTCAGTGGCCTCCCATTATTTCAGGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGATTCTCTGCTCCAAATCTTTCAGTGGCCTCCCATTATTTCAGGAT  550

seq1  AAGCTTCAGGTTTCTTAAGCTGTAGGAAAGAAGCCTGGAAAAGCAAAAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTCAGGTTTCTTAAGCTGTAGGAAAGAAGCCTGGAAAAGCAAAAAC  600

seq1  TAGTCATCGTGAAACAATTTCTCATTTGGACAAAGACCTCATTTGCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCATCGTGAAACAATTTCTCATTTGGACAAAGACCTCATTTGCTCTC  650

seq1  TAGTACTGTCCTCTCCTGCTCCGCTACCAAACTAATCTCCCCAGTCCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACTGTCCTCTCCTGCTCCGCTACCAAACTAATCTCCCCAGTCCTAC  700

seq1  TCTACGCCACATCCATTCTGCTGCATATGTCTTGCATATAAAACTCACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACGCCACATCCATTCTGCTGCATATGTCTTGCATATAAAACTCACCT  750

seq1  GTATGAATTTTAACATCCTGTTCCCTTTGTATATAGCATTCCTTTCGTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGAATTTTAACATCCTGTTCCCTTTGTATATAGCATTCCTTTCGTCT  800

seq1  CCTACACCTTGGCTCACTGAGATCTTGCCTGCTCAACCTACAAGACACAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACACCTTGGCTCACTGAGATCTTGCCTGCTCAACCTACAAGACACAG  850

seq1  CTCAAAAGAAACATTCATTATAACCTCCTTTTCCTCACAACCTCTCCATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAAGAAACATTCATTATAACCTCCTTTTCCTCACAACCTCTCCATG  900

seq1  TTCATAGTACTCATTCATCTGTATCCTCGACCTGCATTTCTCCTCCATTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATAGTACTCATTCATCTGTATCCTCGACCTGCATTTCTCCTCCATTG  950

seq1  TTCTAAAAGGTGTCTCGCAGAGTGTGCCACAGAATGGAAACACAATGGGG  1000
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAA-GTGTCTCGCAGAGTGTGCCACAGAATGGAAACACAATGGGG  999

seq1  TTTTGATAGTGAGGCAAAGGGATGAGTACGTGAATGGAAGAGATAGGGAA  1050
      |||||||||||| ||||| ||||||||||||||||||||||||||||  |
seq2  TTTTGATAGTGA-GCAAA-GGATGAGTACGTGAATGGAAGAGATAGG--A  1045

seq1  TGTGGGTCCAGGAGCTCCTATCAATCCCAACATCTAGACATGGTACTCTG  1100
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGT-CAGGAGCTCCTATCAATCCCAACATCTAGACATGGTACTCTG  1094

seq1  GTTCCTTATA-TCAC-GTAGGTAACACTTGCATAGCCTATGT-GCTGACA  1147
      | | |||||| |||| |||||||||   |||||||||||||| |||||||
seq2  GGT-CTTATATTCACGGTAGGTAAC---TGCATAGCCTATGTGGCTGACA  1140

seq1  TCTTTTCTAATACATTATAGCATATCTA  1175
      |||||||  ||||| |||||||| ||||
seq2  TCTTTTC-GATACA-TATAGCAT-TCTA  1165

seq1: chr6_46779401_46780616
seq2: B6Ng01-132F22.g_67_1246 (reverse)

seq1  GACTCTTGTTCTAGTACTTTTTGTTGCATAGTTGAGAAAGTTATATGAGA  50
      |||||||||||| | |||||||  ||||    || | |||||| | ||| 
seq2  GACTCTTGTTCT-GAACTTTTTTGTGCA----TGTGGAAGTTA-AAGAG-  43

seq1  AGCCAGGCATGGTGGCACACTCCTTTAATCCCAGCACTCAGGAGGCAGAG  100
         ||| |||||||   ||||||||| || ||||| ||||| ||||  ||
seq2  ---CAGCCATGGTG---CACTCCTTT-ATTCCAGC-CTCAGAAGGC--AG  83

seq1  GCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAAGTGAGTTCT  150
      ||| ||| ||||| |||||||||| ||| ||| ||| | ||||||| |||
seq2  GCA-GCGAATTTC-GAGTTTGAGG-CAG-CTGTTCTTC-AAGTGAG-TCT  127

seq1  AGGACAGCCAGGGCTATACAGAGAAACCCTGTCTTGAACCCCCCCCCAAA  200
      | |||||||| ||||||| |||| || |||||| |||||||||||||  |
seq2  A-GACAGCCA-GGCTATAAAGAG-AATCCTGTC-TGAACCCCCCCCC--A  171

seq1  AAAAAACAAAGAAAGAAAGTTATATGAGGATACAGAATCAGAGGTCAAAG  250
      |||||||||   ||||||||||||||| |||||||||||||| |||||||
seq2  AAAAAACAA--GAAGAAAGTTATATGA-GATACAGAATCAGA-GTCAAAG  217

seq1  AGCCACTCACTGGACAGAGAGACAGGATTCTCTGGTTCTAGGACAAAACA  300
      ||||||||||| |||||||||||| ||||||||||||||||||| |||||
seq2  AGCCACTCACT-GACAGAGAGACA-GATTCTCTGGTTCTAGGAC-AAACA  264

seq1  ACCCTGGGACACAAAATGAAATGCAGAAAGACCAAAAAACTATCCACAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGGGACACAAAATGAAATGCAGAAAGACCAAAAAACTATCCACAGT  314

seq1  GTATGTATCTTGAGATACAGGTTGAAGGACATCCGTGGGGCACATGTAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTATCTTGAGATACAGGTTGAAGGACATCCGTGGGGCACATGTAAA  364

seq1  CACAGAAAGACACAGAGGATGTCTCTGGAGCAGGGAATATACTCAAATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAAAGACACAGAGGATGTCTCTGGAGCAGGGAATATACTCAAATTT  414

seq1  GAGAATTGTGGTTGTAATTAAAGCATGATTTAACAGAGAACCCATTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTGTGGTTGTAATTAAAGCATGATTTAACAGAGAACCCATTTATA  464

seq1  GTGAGATATTCTTTTCTAAGAAAGTATTCCATAGTAAAATGAAAATCGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGATATTCTTTTCTAAGAAAGTATTCCATAGTAAAATGAAAATCGTG  514

seq1  GTTTGCACATTGCAAATCTTGAAAACTATTCAGGATTTGTAGCCCACTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGCACATTGCAAATCTTGAAAACTATTCAGGATTTGTAGCCCACTTA  564

seq1  GCGTACATTGCTCTTTGGTTTGCTCATATATATACCAGTTCTTTCAGCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTACATTGCTCTTTGGTTTGCTCATATATATACCAGTTCTTTCAGCCA  614

seq1  TCATAAAAACAATAACTATATTCAAGTAAGTTCAATAAATATGCGTTATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAAACAATAACTATATTCAAGTAAGTTCAATAAATATGCGTTATT  664

seq1  AAATTTGAATTTTATGACATAGAATTTGGTTACTTCGCATGTTTTAAGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTGAATTTTATGACATAGAATTTGGTTACTTCGCATGTTTTAAGAA  714

seq1  GCAGAAAATACACAAGTGAATATTTATGGGTATATTTACAATAATGTTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAAATACACAAGTGAATATTTATGGGTATATTTACAATAATGTTTT  764

seq1  CCAAAGGACTCATGGAAAATATCTCAAGGGGATTATTTCTTTGGCATGGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGGACTCATGGAAAATATCTCAAGGGGATTATTTCTTTGGCATGGG  814

seq1  GAACAAAAAGAATAGCTCTCAATGAAATAAGCACAATACATCAGAAGATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAAAAAGAATAGCTCTCAATGAAATAAGCACAATACATCAGAAGATG  864

seq1  TGTTTCCATTTAAGCAATGTTTAAATAGGATGCAAAACAAGATACAAAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCATTTAAGCAATGTTTAAATAGGATGCAAAACAAGATACAAAAA  914

seq1  AGCTCCCATCTCTCCTCTGATTACCCCTAAACCATGACACAGTTGGTAAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCCATCTCTCCTCTGATTACCCCTAAACCATGACACAGTTGGTAAG  964

seq1  TAGATTCACTAATGAAATCTTGCAGTTAGTCTGAGAAGCTCTTTGGGAAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTCACTAATGAAATCTTGCAGTTAGTCTGAGAAGCTCTTTGGGAAA  1014

seq1  GCCCAGCTGTGGTCATGTGCCCCTTGTCTGTCAGTGAAGCTGGATGATGA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGCTGTGGTCATGTGCCCCTTGTCTGTCAGTGAAGCTGGATGATGA  1064

seq1  GCCTTCCCAACCTGAAGCACAATCAAGCGTCTCTCTTCCAACTCATGGAC  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTCCCAACCTGAAGCACAATCAAGCGTCTCTCTTCCAACTCATGGAC  1114

seq1  TATAGGACTCTTACGGAGATTTTACTTACTGTTTAATATTTTATGGTTGC  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGACTCTTACGGAGATTTTACTTACTGTTTAATATTTTATGGTTGC  1164

seq1  CAAAATTAAAGAATTC  1216
      ||||||||||||||||
seq2  CAAAATTAAAGAATTC  1180