BAC Information

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BAC

Clone NameB6Ng01-132L10
Chromosome6 (Build37)
Map Location 94,591,408 - 94,712,103
singlet/doubletdoublet
Overlap geneLrig1, LOC625941
Upstream geneLOC665831, Magi1, LOC100043262, LOC665856, Slc25a26
Downstream geneEG665865, LOC100043276, LOC100043680, Kbtbd8, LOC435912, Suclg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132L10.bB6Ng01-132L10.g
ACCDH933445DH933446
length1,1421,136
definitionDH933445|Mus musculus domesticus DNA, BAC clone: B6Ng01-132L10, 5' end.DH933446|Mus musculus domesticus DNA, BAC clone: B6Ng01-132L10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(94,710,956 - 94,712,103)(94,591,408 - 94,592,562)
sequence
gaattctttcatgtccctggcaaggaataacaactccactcttcaattag
cagggaagattccagagttttatttccccaactttctctacaattgaggg
agtgaaggaggctgctccatcatttggaagaaaaggtcatctgctcattg
cccagaaaacatcgaacgtttcttactcacgtgtgcccttctccagctca
tctctgttctgtgagagaagtttctataagaacgtacgatgcagagctca
ctgtgttagacacattgtgctaatattaactatggtttcaagactttgtg
tgggtaaaacatatcacagatacacagaaacgcatgccagccaaaagaca
gccattatttcctaggtctgcttaaagaatttacacattctttgaggtac
tccttttcctgaaagaaaaaaaaaagttcaatgtgttttgtccatatgaa
aaagcatttcagaactgaagaacatggcatgtaaagaagagagaggtgag
tgtgttatttttcaatggaaaaaacagctgcttgggtcagatagaaacca
gatgggaaagactcagaagagagaagctgaaacacgttctgcaaaaaaag
acatcagaggcgaaatgtgctcacaaggcagaggagccgatactcccgac
tttcttcctgtggcaatggaccatgtttccttgtccaggaacgtgaaaga
caaacagacgtgagtgtaccaagtgatccaaggaacaggtcccagaaaca
aaatcagttacaccccacagggctaggtgtcttccttagagtctcccaga
gattggcttgctctctgaggagatgggtagaagccccagaattaggatat
gtctgtgtgtcctcattctacaccctgggtggagaaaaaaaccagacaga
gactcaggccttttaagcctgttttataggctttcctttgtcaccagcca
ctgtctcctgacagacatcttcacagactgcgtgaaggtgcgctgaagac
cttgctcttggtggcatcttgctcgcagaagttgagaccgtcttgttttc
ttgtggctgtttctcagcgctgcttgttgctttctacactagtggagcgt
attatttgagttgccacatgctgacacaggctcggccgacca
gaattccaataccaggagataatgtatcaatttgtgattcatcaaacata
acgaaccacagtaaaacaagggaagcaaccattggggtagaagggggtgc
tagaggaatgctctgtgcaactattctataagcctgtacctgctctaaaa
atatattaattaaaaatacaatctcagccaggtgtggatggcccatgcca
ataatcctagcactcacgagatgaggcagcctaatgaatccagagttagc
ctgggctgcaaagtgagactgtctcaaatctctgcccccacctcaaaaaa
gtctcctgaagtattatacagtcctgacgtcccagcagcagaatgcagag
tacacacttctcttctttactgctataccctcagaacccagaaaaatgct
taggatacagaagttgctctaccaagggttgttgagcaaacaagtgaatt
acaactgtagctcaacctcctgacaattacatagaagcaaatgcaagtaa
aaccaccaagctaacatttgttaacaaagcagggaaattagaagtaaagc
agagagctaactttcctttccaggtaaggagcctataggcgatgttaagg
aatagagtgggaagaagtgggtttctgagttacttacaccttttcattca
gccccaaacactgagatccatggatgagtccaagttagcaagggtgagtg
agacactgctacatcaaggctagctgctgtttctttttgcctggttcact
ttaaaagccactgtagctggaacctgaattaaaactcactggagagatgg
atgacagcagtctgagtcatcctaatgtcaccagctcaatgctttcccac
tccctcagaagggttccaatcagatgtcactgaccagtgtgttctaaaag
ccacatctgcctttatccccaggacacatgctgggatccccagtactggc
tgggatttctagagcttggacttccttccatacctgcaggaaggatctgt
cctgatatctgggcagggaggtgtgtctatcagcatgagaccattagaat
tccatctaataagacatctacaggtaaagccacgatgttcattcctggtc
aagcaccacacgtgtcccctcgaagtccttcagctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_94710956_94712103
seq2: B6Ng01-132L10.b_49_1190 (reverse)

seq1  TGGTGCGGCCGGAAGCCCTGTGGTCAGCATGTGGCAACTCAAATAATACG  50
      |||| ||||||  || ||||| ||||||||||||||||||||||||||||
seq2  TGGT-CGGCCG--AG-CCTGT-GTCAGCATGTGGCAACTCAAATAATACG  45

seq1  CTCCGCTAGTGTGAGAAAGCCACAAGGCAGCGCTGAGGAAACAGCCCACA  100
      |||| ||||||| ||||||| |||| |||||||||| |||||||||   |
seq2  CTCCACTAGTGT-AGAAAGCAACAA-GCAGCGCTGA-GAAACAGCCACAA  92

seq1  GGAAAC-AGACGGTCTC-ACTTCTGCCGAGCAAGATGGCCACC-AGAGCA  147
      | |||| |||||||||| ||||||| |||||||||| |||||| ||||||
seq2  GAAAACAAGACGGTCTCAACTTCTG-CGAGCAAGAT-GCCACCAAGAGCA  140

seq1  AGGTC-TCAGCGCACCTCCACGCAGTCTGTGGAGATGTCTGTCAGGAGAC  196
      ||||| ||||||||||| ||||||||||||| ||||||||||||||||||
seq2  AGGTCTTCAGCGCACCTTCACGCAGTCTGTGAAGATGTCTGTCAGGAGAC  190

seq1  AGTTGGCTGGTGACAAAGGAGAGCCTAT-AAACAGGCTTAAAAGGCCTGA  245
      || ||||||||||||||||| ||||||| |||||||||||||||||||||
seq2  AG-TGGCTGGTGACAAAGGAAAGCCTATAAAACAGGCTTAAAAGGCCTGA  239

seq1  GTCTCTGTCTGGTTTTTTTCTCCACCCAGGGTGTAGAATGAGGACACACA  295
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGTCTGGTTTTTTTCTCCACCCAGGGTGTAGAATGAGGACACACA  289

seq1  GACATATCCTAATTCTGGGGCTTCTACCCATCTCCTCAGAGAGCAAGCCA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATCCTAATTCTGGGGCTTCTACCCATCTCCTCAGAGAGCAAGCCA  339

seq1  ATCTCTGGGAGACTCTAAGGAAGACACCTAGCCCTGTGGGGTGTAACTGA  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGGGAGACTCTAAGGAAGACACCTAGCCCTGTGGGGTGTAACTGA  389

seq1  TTTTGTTTCTGGGACCTGTTCCTTGGATCACTTGGTACACTCACGTCTGT  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTCTGGGACCTGTTCCTTGGATCACTTGGTACACTCACGTCTGT  439

seq1  TTGTCTTTCACGTTCCTGGACAAGGAAACATGGTCCATTGCCACAGGAAG  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTTCACGTTCCTGGACAAGGAAACATGGTCCATTGCCACAGGAAG  489

seq1  AAAGTCGGGAGTATCGGCTCCTCTGCCTTGTGAGCACATTTCGCCTCTGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCGGGAGTATCGGCTCCTCTGCCTTGTGAGCACATTTCGCCTCTGA  539

seq1  TGTCTTTTTTTGCAGAACGTGTTTCAGCTTCTCTCTTCTGAGTCTTTCCC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTTTTTGCAGAACGTGTTTCAGCTTCTCTCTTCTGAGTCTTTCCC  589

seq1  ATCTGGTTTCTATCTGACCCAAGCAGCTGTTTTTTCCATTGAAAAATAAC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGGTTTCTATCTGACCCAAGCAGCTGTTTTTTCCATTGAAAAATAAC  639

seq1  ACACTCACCTCTCTCTTCTTTACATGCCATGTTCTTCAGTTCTGAAATGC  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCACCTCTCTCTTCTTTACATGCCATGTTCTTCAGTTCTGAAATGC  689

seq1  TTTTTCATATGGACAAAACACATTGAACTTTTTTTTTTCTTTCAGGAAAA  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCATATGGACAAAACACATTGAACTTTTTTTTTTCTTTCAGGAAAA  739

seq1  GGAGTACCTCAAAGAATGTGTAAATTCTTTAAGCAGACCTAGGAAATAAT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTACCTCAAAGAATGTGTAAATTCTTTAAGCAGACCTAGGAAATAAT  789

seq1  GGCTGTCTTTTGGCTGGCATGCGTTTCTGTGTATCTGTGATATGTTTTAC  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTCTTTTGGCTGGCATGCGTTTCTGTGTATCTGTGATATGTTTTAC  839

seq1  CCACACAAAGTCTTGAAACCATAGTTAATATTAGCACAATGTGTCTAACA  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAAAGTCTTGAAACCATAGTTAATATTAGCACAATGTGTCTAACA  889

seq1  CAGTGAGCTCTGCATCGTACGTTCTTATAGAAACTTCTCTCACAGAACAG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAGCTCTGCATCGTACGTTCTTATAGAAACTTCTCTCACAGAACAG  939

seq1  AGATGAGCTGGAGAAGGGCACACGTGAGTAAGAAACGTTCGATGTTTTCT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGAGCTGGAGAAGGGCACACGTGAGTAAGAAACGTTCGATGTTTTCT  989

seq1  GGGCAATGAGCAGATGACCTTTTCTTCCAAATGATGGAGCAGCCTCCTTC  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATGAGCAGATGACCTTTTCTTCCAAATGATGGAGCAGCCTCCTTC  1039

seq1  ACTCCCTCAATTGTAGAGAAAGTTGGGGAAATAAAACTCTGGAATCTTCC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCTCAATTGTAGAGAAAGTTGGGGAAATAAAACTCTGGAATCTTCC  1089

seq1  CTGCTAATTGAAGAGTGGAGTTGTTATTCCTTGCCAGGGACATGAAAGAA  1145
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTAATTGAAGAGTGGAGTTGTTATTCCTTGCCAGGGACATGAAAGAA  1139

seq1  TTC  1148
      |||
seq2  TTC  1142

seq1: chr6_94591408_94592562
seq2: B6Ng01-132L10.g_69_1204

seq1  GAATTCCAATACCAGGAGATAATGTATCAATTTGTGATTCATCAAACATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAATACCAGGAGATAATGTATCAATTTGTGATTCATCAAACATA  50

seq1  ACGAACCACAGTAAAACAAGGGAAGCAACCATTGGGGTAGAAGGGGGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAACCACAGTAAAACAAGGGAAGCAACCATTGGGGTAGAAGGGGGTGC  100

seq1  TAGAGGAATGCTCTGTGCAACTATTCTATAAGCCTGTACCTGCTCTAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGAATGCTCTGTGCAACTATTCTATAAGCCTGTACCTGCTCTAAAA  150

seq1  ATATATTAATTAAAAATACAATCTCAGCCAGGTGTGGATGGCCCATGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTAATTAAAAATACAATCTCAGCCAGGTGTGGATGGCCCATGCCA  200

seq1  ATAATCCTAGCACTCACGAGATGAGGCAGCCTAATGAATCCAGAGTTAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCCTAGCACTCACGAGATGAGGCAGCCTAATGAATCCAGAGTTAGC  250

seq1  CTGGGCTGCAAAGTGAGACTGTCTCAAATCTCTGCCCCCACCTCAAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTGCAAAGTGAGACTGTCTCAAATCTCTGCCCCCACCTCAAAAAA  300

seq1  GTCTCCTGAAGTATTATACAGTCCTGACGTCCCAGCAGCAGAATGCAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCCTGAAGTATTATACAGTCCTGACGTCCCAGCAGCAGAATGCAGAG  350

seq1  TACACACTTCTCTTCTTTACTGCTATACCCTCAGAACCCAGAAAAATGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACACTTCTCTTCTTTACTGCTATACCCTCAGAACCCAGAAAAATGCT  400

seq1  TAGGATACAGAAGTTGCTCTACCAAGGGTTGTTGAGCAAACAAGTGAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATACAGAAGTTGCTCTACCAAGGGTTGTTGAGCAAACAAGTGAATT  450

seq1  ACAACTGTAGCTCAACCTCCTGACAATTACATAGAAGCAAATGCAAGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTGTAGCTCAACCTCCTGACAATTACATAGAAGCAAATGCAAGTAA  500

seq1  AACCACCAAGCTAACATTTGTTAACAAAGCAGGGAAATTAGAAGTAAAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACCAAGCTAACATTTGTTAACAAAGCAGGGAAATTAGAAGTAAAGC  550

seq1  AGAGAGCTAACTTTCCTTTCCAGGTAAGGAGCCTATAGGCGATGTTAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGCTAACTTTCCTTTCCAGGTAAGGAGCCTATAGGCGATGTTAAGG  600

seq1  AATAGAGTGGGAAGAAGTGGGTTTCTGAGTTACTTACACCTTTTCATTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGAGTGGGAAGAAGTGGGTTTCTGAGTTACTTACACCTTTTCATTCA  650

seq1  GCCCCAAACACTGAGATCCATGGATGAGTCCAAGTTAGCAAGGGTGAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAAACACTGAGATCCATGGATGAGTCCAAGTTAGCAAGGGTGAGTG  700

seq1  AGACACTGCTACATCAAGGCTAGCTGCTGTTTCTTTTTGCCTGGTTCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACTGCTACATCAAGGCTAGCTGCTGTTTCTTTTTGCCTGGTTCACT  750

seq1  TTAAAAGCCACTGTAGCTGGAACCTGAATTAAAACTCACTGGAGAGATGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAGCCACTGTAGCTGGAACCTGAATTAAAACTCACTGGAGAGATGG  800

seq1  ATGACAGCAGTCTGAGTCATCCTAATGTCACCAGCTCAATGCTTTCCCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGCAGTCTGAGTCATCCTAATGTCACCAGCTCAATGCTTTCCCAC  850

seq1  TCCCTCAGAAGGGTTCCAATCAGATGTCACTGACCAGTGTGTTCTAAAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCAGAAGGGTTCCAATCAGATGTCACTGACCAGTGTGTTCTAAAAG  900

seq1  CCACATCTGCCTTTAATCCCCAGGGACACATGCTGGGATCCCCAGTACTG  950
      |||||||||||||| ||||||| |||||||||||||||||||||||||||
seq2  CCACATCTGCCTTT-ATCCCCA-GGACACATGCTGGGATCCCCAGTACTG  948

seq1  GCTGGGATTTCTAAAGGCTTGGACTTCCTTCCATACCTGCAGGAAGGGAA  1000
      ||||||||||||| | |||||||||||||||||||||||||||||||  |
seq2  GCTGGGATTTCTAGA-GCTTGGACTTCCTTCCATACCTGCAGGAAGG--A  995

seq1  TCTGTCCTGATATCTGGGCAGGGAAGCGTGTTGTCTATCAGCCATGAGAC  1050
      |||||||||||||||||||||||| | |   |||||||||| ||||||||
seq2  TCTGTCCTGATATCTGGGCAGGGAGGTG---TGTCTATCAG-CATGAGAC  1041

seq1  CATTAGAATTTCCATCTACATACAGACATCCTACAGGGAAAAGCCACAGA  1100
      |||||||| ||||||||| ||| |||||| ||||| || |||||||| ||
seq2  CATTAGAA-TTCCATCTA-ATA-AGACAT-CTACA-GGTAAAGCCAC-GA  1085

seq1  TGTTTTCATTCCTGGTCAAGGCCACCAC-CGTGGCCCTCAGATGCTCTTT  1149
      ||  ||||||||||||||||  |||||| |||| |||   || | || ||
seq2  TG--TTCATTCCTGGTCAAG--CACCACACGTGTCCCCTCGAAG-TCCTT  1130

seq1  CAGCTT  1155
      ||||||
seq2  CAGCTT  1136