BAC Information

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BAC

Clone NameB6Ng01-132O14
Chromosome6 (Build37)
Map Location 37,401,790 - 37,587,921
singlet/doubletdoublet
Overlap geneAkr1d1, LOC665046
Upstream geneChrm2, EG620863, LOC100039370, Ptn, LOC100039514, Dgki, EG665024, Creb3l2
Downstream geneYbx1-ps2, LOC100039636, LOC665102, Trim24, Svopl, Atp6v0a4, LOC100039657, D630002J15Rik, D630045J12Rik, LOC665125, Zc3hav1l, Zc3hav1, Rpl30-ps1, Ttc26, D130059P03Rik, 3110054G05Rik, 1110001J03Rik, LOC621228, Luc7l2, Klrg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132O14.bB6Ng01-132O14.g
ACCDH933597DH933598
length1,108929
definitionDH933597|Mus musculus domesticus DNA, BAC clone: B6Ng01-132O14, 5' end.DH933598|Mus musculus domesticus DNA, BAC clone: B6Ng01-132O14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,586,967 - 37,587,921)(37,401,790 - 37,402,704)
sequence
gaattcttataggatcataactaaaaattaagaaatcatctatttgtgta
tatagcatcactacaagagaatacatctaaaacgtaaaaaagaatacatc
tttgttgttctgcagagatctgctcaaaaggatgggctagtacctagtga
ctgttatatgtatttaacaataacaggaaaaacatattaatagcaggagt
cttccctaaaatataatcttctcagccttgcctaatgaagcaaatctgtc
attaactttgacagtccatagtgtaaccatttcaggaagatgacctgcta
gtttttagcttctccttgatggttcctgtgaaaccagatatattgataat
gagcaaaacaattactaaaaaaaagaatatgagtcctggaggaaagtgtg
ttatgggatggcatgaacattgagctcttgagttctcagcaactctgact
acctgttcaagacactcaaaggattgagcttacattactacatcatggag
ggaatggggtttacaagtccctgtgcttcatgaggaattttagataacag
ttgtgggtgggtggcttacaaagtcctaaccctttctgaggatttatggt
tggtgtggcagagagggacgtggttttcagtggtgttgctcctggtacat
tacccttgctccttttagtaatcctagtcatactcataaatacacacata
gaaagaaagagacacatagagagaaagagatgaagaaataaacactcggg
tagaggcaagttatctatagaagtgggcgagggcataggggaaatatgat
caaaatacattgcatacatacacaaacatgcccccctccccaaaaaaccc
atttgtgatggtttaaatgagaaacatcctgagtatttgaacacttagcc
ccttgacgtgccgattaggaattttatgaggagagacctgttgcaagaag
tgcattacttggggtaggattgtgagcctagatcttcaagcttgtacaaa
gaaataaatatactgtggtgagcagtatttttagtggtccatgccagtgt
gctcctggagtaatcgtgcagcaacaaacctgttgtgaaagggtttattg
gggaaagg
gaattccaagaacctgcctggcaggttcttatagggagagaggaagttca
gcctgcaatctggccataggctacatgactttcctcggaggtttttaggg
gttacaggtaggaagggttgttgattggtcgaaacacaggacctaattat
cataagataagaagggttgggctgagtgggacttactggctgaatcatgt
ggcacttgcaggaagctctgtgcggggtcatcctctagataagatcaggt
acctgtgtttagaaatatgctccagataagatcgggcagagaagaggaag
tcccgcagagaactggagtcctccacgttgtagtaaactctgagagcttc
tccagacatgcagactgtgaccctaatagcagagtctcccaacagtcctc
cattttccttcattctgtacatggctctgatacctgactcttgccaatag
acaggtcatccagaccaaaaaatattaaaaaaagctaacagacattataa
accaaatcaacctcacagatatttatagaaggttttatccaaacaaaaaa
gaatgtaccttctcggcatctcactgaactttctccaacatggaccacat
agtcggactcaaagcaagtctcaataaataaaaggaaattgaaataacat
gctgcatactatctcaccactgtggattaaagctggcatcaacaacagaa
acagcagaaagcttacaaattcatggaaactgaacaacccactactaaaa
taaaaaatttaaagactttaaagaattgagtgaaagtgaaaatacaacac
actcagactttttgggacacatgaaaggtggttttaacagataggttcat
agcatttcgttgcctacattaaaaaactggagcgatcttgtaactttaac
agcacacctgaaggatctagatcacatag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_37586967_37587921
seq2: B6Ng01-132O14.b_215_1157 (reverse)

seq1  CCTTTCCCCAATAAACCCCTTTCACAACAGGTTTGTTGCATGGCAGAATT  50
      ||||||||||||||| |||||||||||||||||||||||   |||  |||
seq2  CCTTTCCCCAATAAA-CCCTTTCACAACAGGTTTGTTGC--TGCACGATT  47

seq1  ACT-CAGGGGCACACCTTGGCATGGACCCCACTAAAAGTACCTGCTCACC  99
      ||| |||| ||||||  |||||||||  ||||||||| || |||||||||
seq2  ACTCCAGGAGCACAC--TGGCATGGA--CCACTAAAAATA-CTGCTCACC  92

seq1  ACAGTATATTTATTTCTTTTGTAACAGGCTTGAAGATCTTAGGCTCACAA  149
      |||||||||||||||| ||||| ||| ||||||||||| ||||||||| |
seq2  ACAGTATATTTATTTC-TTTGT-ACAAGCTTGAAGATC-TAGGCTCAC-A  138

seq1  ATCCTACCCCAAGTAATGCACTTCTTGCAACAGGTCTCTCCTCATAAATT  199
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ATCCTACCCCAAGTAATGCACTTCTTGCAACAGGTCTCTCCTCATAAAAT  188

seq1  TCCTAATCGGCACGTCAAGGGGCTAAGTGTTCAAATACTCAGGATGTTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATCGGCACGTCAAGGGGCTAAGTGTTCAAATACTCAGGATGTTTC  238

seq1  TCATTTAAACCATCACAAATGGGTTTTTTTGGGGAGGGGGGCATGTTTGT  299
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCATTTAAACCATCACAAATGGG-TTTTTTGGGGAGGGGGGCATGTTTGT  287

seq1  GTATGTATGCAATGTATTTTGATCATATTTCCCCTATGCCCTCGCCCACT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTATGCAATGTATTTTGATCATATTTCCCCTATGCCCTCGCCCACT  337

seq1  TCTATAGATAACTTGCCTCTACCCGAGTGTTTATTTCTTCATCTCTTTCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAGATAACTTGCCTCTACCCGAGTGTTTATTTCTTCATCTCTTTCT  387

seq1  CTCTATGTGTCTCTTTCTTTCTATGTGTGTATTTATGAGTATGACTAGGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGTGTCTCTTTCTTTCTATGTGTGTATTTATGAGTATGACTAGGA  437

seq1  TTACTAAAAGGAGCAAGGGTAATGTACCAGGAGCAACACCACTGAAAACC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTAAAAGGAGCAAGGGTAATGTACCAGGAGCAACACCACTGAAAACC  487

seq1  ACGTCCCTCTCTGCCACACCAACCATAAATCCTCAGAAAGGGTTAGGACT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTCCCTCTCTGCCACACCAACCATAAATCCTCAGAAAGGGTTAGGACT  537

seq1  TTGTAAGCCACCCACCCACAACTGTTATCTAAAATTCCTCATGAAGCACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAAGCCACCCACCCACAACTGTTATCTAAAATTCCTCATGAAGCACA  587

seq1  GGGACTTGTAAACCCCATTCCCTCCATGATGTAGTAATGTAAGCTCAATC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTTGTAAACCCCATTCCCTCCATGATGTAGTAATGTAAGCTCAATC  637

seq1  CTTTGAGTGTCTTGAACAGGTAGTCAGAGTTGCTGAGAACTCAAGAGCTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGTGTCTTGAACAGGTAGTCAGAGTTGCTGAGAACTCAAGAGCTC  687

seq1  AATGTTCATGCCATCCCATAACACACTTTCCTCCAGGACTCATATTCTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTCATGCCATCCCATAACACACTTTCCTCCAGGACTCATATTCTTT  737

seq1  TTTTTAGTAATTGTTTTGCTCATTATCAATATATCTGGTTTCACAGGAAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGTAATTGTTTTGCTCATTATCAATATATCTGGTTTCACAGGAAC  787

seq1  CATCAAGGAGAAGCTAAAAACTAGCAGGTCATCTTCCTGAAATGGTTACA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGGAGAAGCTAAAAACTAGCAGGTCATCTTCCTGAAATGGTTACA  837

seq1  CTATGGACTGTCAAAGTTAATGACAGATTTGCTTCATTAGGCAAGGCTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGACTGTCAAAGTTAATGACAGATTTGCTTCATTAGGCAAGGCTGA  887

seq1  GAAGATTATATTTTAGGGAAGACTCCTGCTATTAATATGTTTTTCCTGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATTATATTTTAGGGAAGACTCCTGCTATTAATATGTTTTTCCTGTT  937

seq1  ATTGTT  955
      ||||||
seq2  ATTGTT  943

seq1: chr6_37401790_37402704
seq2: B6Ng01-132O14.g_68_988

seq1  GAATTCCAAGAACCTGCCTGGCAGGTTCTTATAGGGAGAGAGGAAGTTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGAACCTGCCTGGCAGGTTCTTATAGGGAGAGAGGAAGTTCA  50

seq1  GCCTGCAATCTGGCCATAGGCTACATGACTTTCCTCGGAGGTTTTTAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCAATCTGGCCATAGGCTACATGACTTTCCTCGGAGGTTTTTAGGG  100

seq1  GTTACAGGTAGGAAGGGTTGTTGATTGGTCGAAACACAGGACCTAATTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGGTAGGAAGGGTTGTTGATTGGTCGAAACACAGGACCTAATTAT  150

seq1  CATAAGATAAGAAGGGTTGGGCTGAGTGGGACTTACTGGCTGAATCATGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGATAAGAAGGGTTGGGCTGAGTGGGACTTACTGGCTGAATCATGT  200

seq1  GGCACTTGCAGGAAGCTCTGTGCGGGGTCATCCTCTAGATAAGATCAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTGCAGGAAGCTCTGTGCGGGGTCATCCTCTAGATAAGATCAGGT  250

seq1  ACCTGTGTTTAGAAATATGCTCCAGATAAGATCGGGCAGAGAAGAGGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGTTTAGAAATATGCTCCAGATAAGATCGGGCAGAGAAGAGGAAG  300

seq1  TCCCGCAGAGAACTGGAGTCCTCCACGTTGTAGTAAACTCTGAGAGCTTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCGCAGAGAACTGGAGTCCTCCACGTTGTAGTAAACTCTGAGAGCTTC  350

seq1  TCCAGACATGCAGACTGTGACCCTAATAGCAGAGTCTCCCAACAGTCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACATGCAGACTGTGACCCTAATAGCAGAGTCTCCCAACAGTCCTC  400

seq1  CATTTTCCTTCATTCTGTACATGGCTCTGATACCTGACTCTTGCCAATAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTCCTTCATTCTGTACATGGCTCTGATACCTGACTCTTGCCAATAG  450

seq1  ACAGGTCATCCAGACCAAAAAATATTAAAAAAAGCTAACAGACATTATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTCATCCAGACCAAAAAATATTAAAAAAAGCTAACAGACATTATAA  500

seq1  ACCAAATCAACCTCACAGATATTTATAGAAGGTTTTATCCAAACAAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAATCAACCTCACAGATATTTATAGAAGGTTTTATCCAAACAAAAAA  550

seq1  GAATGTACCTTCTCGGCATCTCACTGAACTTTCTCCAACATGGACCACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTACCTTCTCGGCATCTCACTGAACTTTCTCCAACATGGACCACAT  600

seq1  AGTCGGACTCAAAGCAAGTCTCAATAAATAAAAGGAAATTGAAATAACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGGACTCAAAGCAAGTCTCAATAAATAAAAGGAAATTGAAATAACAT  650

seq1  GCTGCATACTATCTCACCACTGTGGATTAAAGCTGGCATCAACAACAGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCATACTATCTCACCACTGTGGATTAAAGCTGGCATCAACAACAGAA  700

seq1  ACAGCAGAAAGCTTACAAATTCATGGAAACTGAACAACCCACTACT-AAA  749
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ACAGCAGAAAGCTTACAAATTCATGGAAACTGAACAACCCACTACTAAAA  750

seq1  TAAAAAA-TTAAAGACTTTAAAGAATTGAGTGAAAGTGAAAATACAACAC  798
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAAATTTAAAGACTTTAAAGAATTGAGTGAAAGTGAAAATACAACAC  800

seq1  ACTCAGAC-TTTTGGGACACATG-AAGGTGGTTTTAACAGATAGGTTCAT  846
      |||||||| |||||||||||||| ||||||||||||||||||||||||||
seq2  ACTCAGACTTTTTGGGACACATGAAAGGTGGTTTTAACAGATAGGTTCAT  850

seq1  AGCATTACG-TGCCTACATTAAAAAACTGGAGCGATCTTGTAAC-TTAAC  894
      |||||| || |||||||||||||||||||||||||||||||||| |||||
seq2  AGCATTTCGTTGCCTACATTAAAAAACTGGAGCGATCTTGTAACTTTAAC  900

seq1  AGCACACCTGAAGGATCTAGA  915
      |||||||||||||||||||||
seq2  AGCACACCTGAAGGATCTAGA  921