BAC Information

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BAC

Clone NameB6Ng01-133O18
Chromosome6 (Build37)
Map Location 19,941,006 - 19,942,142
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC626180, Eif3s6-ps4
Downstream geneLOC100040838
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133O18.bB6Ng01-133O18.g
ACCDH934347DH934348
length1,1071,212
definitionDH934347|Mus musculus domesticus DNA, BAC clone: B6Ng01-133O18, 5' end.DH934348|Mus musculus domesticus DNA, BAC clone: B6Ng01-133O18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttacctaattagaaaaaaattaatatatatttgtatggaaaatc
attgatctttttagcaagaacagcattttgaaatacttcctttaaattgt
tatttgttcttgtctcatatacacaagcaagacagtcattgtcttttttt
actggggaaagttttttaacatacatggatttttttcagtgtattctgat
gaagcttttattttcctatctctttgttatcttttaatttttattctctt
tcctgtgatctcctttcctattgttaaagacttacacatacctcaaacca
attcatggaagtaaaatgtaataaatgaaatataccagcacacacaaaca
cacatacagccacacaacacacagaaacatacacacaaacactgttacac
agacacatatacatacatacacatatgcatacatacacacacacacacac
actaacacacacacataaattaggatcctacacagataatacaagtatta
aaagataccaggttctctttctttctttctttctttctttctttctttct
ttctttctttctttctttctttctttctttctttctttctttccttttct
ttttttttctttttctcttttttttttaactgttaaaagtcattgagaat
aacctaaggcttacttttaaggttagaaactagttacaatttacataata
ttgatgatgttacaaactttacttccctatcctgtgacttgctgaaataa
atggaaagattttcttagtgactatttcacacttgagcaatagagaaagt
agattttatctgtttatgcacagggaaaagtggcagttttcatttattca
ttttgagagacaaaactttcactgtagattgagatagtgttaggagaatc
cagggttttcacactcttcttttggatgcagtgaatttctgtaagtgcct
gataactctgcttctctgagattagatgcactatctctagactttgacct
cactttctctgaaatgtaacacatgcacaaccactttctgcttactcttt
atctgtagtgggaagtatttactcagtttgcagtcgtatccagttcaatg
ctgtttt
gaattcaataattcacttaaagagatacaggagaacactgctaaagagtt
acaagtccttaaagaaaaacaggaaaacactgctaaagagttacaagtcc
ttaaagaaaaacaggaaaacacaaccaaacaggtagaagtccttatagaa
aaacaggaaaacacatctaaacaggtgatggaaatgaacaaaaacatact
agacctaaaaagggaagtagacacaataaagaaaacccaaagtgaggcaa
cagtggagatagaaacactaggaaagaaatctggaaacatagatgcgagc
atcagcaacagaatacaagaaatggaagagggaatctcaggtgcagaaga
ttccatagagaacatcggcacaacaatcaaagaaagtggaaaatgcaaaa
agatcctaactaaaaacatccaggaaatccaggacacaatgagaagacca
aacctacggataataggagtggatgagaatgaagattttcaactcaaagg
accagcaaatatcttcaacaaaattattgaagaaaacttcccaaatctaa
agaaagagatacccatgaacatacaagaagcctacagaactccaaataga
ctggaccagaaaagaaattcctcccgacacataataatcagaacatcaaa
tgcactaaataaagctagaatactaaaagcagtaaggaaaaaaggtcaag
taaaatataaaggcaagcctatcagaattacaccagatttttcaccaaag
actatgaaagccagaagagcctggacagatgttatacagacactaagaga
acacaaatgccagcccaggctactatacacagccaaactctcaattacca
tagatggagaaaccaaagtattccacgacaaaactaaattcacccattat
ctctccacgaatccagcccttcaaaggataataacagaaaaaaccaatac
aaggacgggaaccaagccctagaaaaaacagaagataatccctcacaaac
caaaaagaagacagccagaagaacagatgcactttacacaaaaataacag
gagcacaattacttctaatttctctaatatcaatggactcattcccaata
aaaggacatgactaacgaactgctaccaacagaccaacatctgctactta
cgatcatctcagaagacgaacctcctccaggaggctgaaagcaattccag
acaatggttctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_19941006_19942142
seq2: B6Ng01-133O18.b_47_1153

seq1  GAATTCTTACCTAATTAGAAAAAAATTAATATATATTTGTATGGAAAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTACCTAATTAGAAAAAAATTAATATATATTTGTATGGAAAATC  50

seq1  ATTGATCTTTTTAGCAAGAACAGCATTTTGAAATACTTCCTTTAAATTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATCTTTTTAGCAAGAACAGCATTTTGAAATACTTCCTTTAAATTGT  100

seq1  TATTTGTTCTTGTCTCATATACACAAGCAAGACAGTCATTGTCTTTTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTGTTCTTGTCTCATATACACAAGCAAGACAGTCATTGTCTTTTTTT  150

seq1  ACTGGGGAAAGTTTTTTAACATACATGGATTTTTTTCAGTGTATTCTGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGGAAAGTTTTTTAACATACATGGATTTTTTTCAGTGTATTCTGAT  200

seq1  GAAGCTTTTATTTTCCTATCTCTTTGTTATCTTTTAATTTTTATTCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTTTTATTTTCCTATCTCTTTGTTATCTTTTAATTTTTATTCTCTT  250

seq1  TCCTGTGATCTCCTTTCCTATTGTTAAAGACTTACACATACCTCAAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGATCTCCTTTCCTATTGTTAAAGACTTACACATACCTCAAACCA  300

seq1  ATTCATGGAAGTAAAATGTAATAAATGAAATATACCAGCACACACAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATGGAAGTAAAATGTAATAAATGAAATATACCAGCACACACAAACA  350

seq1  CACATACAGCCACACAACACACAGAAACATACACACAAACACTGTTACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATACAGCCACACAACACACAGAAACATACACACAAACACTGTTACAC  400

seq1  AGACACATATACATACATACACATATGCATACATACACACACACACACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACATATACATACATACACATATGCATACATACACACACACACACAC  450

seq1  ACTAACACACACACATAAATTAGGATCCTACACAGATAATACAAGTATTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACACACACACATAAATTAGGATCCTACACAGATAATACAAGTATTA  500

seq1  AAAGATACCAGGTTCTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  550
      |||||||||||||||    |||||||||||||||||||||||||||||||
seq2  AAAGATACCAGGTTC----TCTTTCTTTCTTTCTTTCTTTCTTTCTTTCT  546

seq1  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCCTT  596

seq1  TTCTTTTTTTTTCTTTTTCTCTTTTTTTTTTAACTGTTAAAAGTCATTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTTCTTTTTCTCTTTTTTTTTTAACTGTTAAAAGTCATTGA  646

seq1  GAATAACCTAAGGCTTACTTTTAAGGTTAGAAACTAGTTACAATTTACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAACCTAAGGCTTACTTTTAAGGTTAGAAACTAGTTACAATTTACAT  696

seq1  AATATTGATGATGTTACAAACTTTACTTCCCTATCCTGTGACTTGCTGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTGATGATGTTACAAACTTTACTTCCCTATCCTGTGACTTGCTGAA  746

seq1  ATAAATGGAAAGATTTTCTTAGTGACTATTTCACACTTGAGCAATAGAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGGAAAGATTTTCTTAGTGACTATTTCACACTTGAGCAATAGAGA  796

seq1  AAGTAGATTTTATCTGTTTATGCACAGGGAAAAGTGGCAGTTTTCATTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAGATTTTATCTGTTTATGCACAGGGAAAAGTGGCAGTTTTCATTTA  846

seq1  TTCATTTTGAGAGACAAAACTTTCACTGTAGATTGAGATAGTGTTAGGAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTGAGAGACAAAACTTTCACTGTAGATTGAGATAGTGTTAGGAG  896

seq1  AATCCAGGGTTTTCACACTCTTCTTTTGGAATGCAAGTGAATTTCTGTAA  950
      ||||||||||||||||||||||||||||| |||| |||||||||||||||
seq2  AATCCAGGGTTTTCACACTCTTCTTTTGG-ATGC-AGTGAATTTCTGTAA  944

seq1  GTGCCTGATAAACTCTGCTTCTCCTGAGATTAGGATGCAACCTTATCTCT  1000
      ||||||||| |||||||||||| ||||||||| ||||||    |||||||
seq2  GTGCCTGAT-AACTCTGCTTCT-CTGAGATTA-GATGCA---CTATCTCT  988

seq1  AAGAACTTTGACCTCACTTTCTCTTGAAATGTAAACACATGCCAACAAAC  1050
      |   ||||||||||||||||||| |||||||| |||||||||  || |||
seq2  A--GACTTTGACCTCACTTTCTC-TGAAATGT-AACACATGC--AC-AAC  1031

seq1  AACTTTCTGGCCTTTACTCTTTATCCTGTAGTTGGGAAGTATTTACTCAA  1100
       ||||||||    ||||||||||| |||||| ||||||||||||||||| 
seq2  CACTTTCTG---CTTACTCTTTAT-CTGTAG-TGGGAAGTATTTACTCA-  1075

seq1  GGTTTGCAGTCGGTTATCCAGTTTTCAATGCTGTTTT  1137
       |||||||||||  |||||||  ||||||||||||||
seq2  -GTTTGCAGTCG--TATCCAG--TTCAATGCTGTTTT  1107