BAC Information

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BAC

Clone NameB6Ng01-134D18
Chromosome6 (Build37)13 (Build37)
Map Location 18,835,452 - 18,835,96888,006,999 - 88,008,129
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134D18.bB6Ng01-134D18.g
ACCDH934584DH934585
length1,0391,116
definitionDH934584|Mus musculus domesticus DNA, BAC clone: B6Ng01-134D18, 5' end.DH934585|Mus musculus domesticus DNA, BAC clone: B6Ng01-134D18, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,452 - 18,835,968)(88,006,999 - 88,008,129)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaaatccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgctcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttctttga
tctacttagatttgaccttagtacaaggagataagtatggatcaatttgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagttttttatcacaattg
ctctgtagtaaagctttaggtcaggcatggtgattccaccagaggttctt
ttatccttgagaagagtttttgctatcctaggttttttgttattccagat
gaatttgcaaattgctccttctaattcgttgaagaattgtgttggaattt
tgatggggattgcattgcatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccatca
tctgagatcttctttaatttctttcttcagagacttgaagtttttatcat
acagatctttcacttccttagttagagtcacggcgagatatttatattat
ttgtgactattgaaaaggtgtgtttccctatttctttctcagctgttatt
ctttgtgtagagaaaggcattgacttgtttgagtagttt
gaattcctgaaagttgtgtatccagccagagtcagtgtacctgaaacaca
acccaacacctccacttaagtaagattcaggaaattccatgaaaaaaagc
aggataaagatttacatatccaaggagaaagtctgctcataccttctaga
tatgagagtgaagcaacaccaaaaaaacttaacattatggttgcaagaaa
aagacctgaacattaacaccactttacataaatagtgtgaaaaatactgg
acaagcctcatccctagaagaagatataaaatcgactgatggcagctaag
gatgacaacacggtttgtttccatcagagataagccaattctaactgtaa
agttttgaatacatacaggtaagaaaaatattaattgaactcagtattgc
caaatacaaatttttctacagcttcagaaaaaagttaataagttgaggca
ttatctttaatacatacactgactttttaatgctatgaaaacatgaaata
ggcaataccaaaataaaacattatttacaaattttctgttttaatgttac
tagaagtacaataataggtttattgttctggcattaaattatggaaggaa
gatatcagtaacgttttaatgacagcttaatagaagactgtaaatacagt
tttgggtgattttcatttataaaaatacatctctcatttaatttgaattg
agaaggaattagtaccaattttttttttaatttcttccactgtgaccaga
ggggagatttcccatggtagtagtgattctttttaagcaaagggaaaact
ttttttttattacttatcaaattttcaataaaacctttaatatgtaacta
tgtgtaacatcatattttactaaaattttataacttttattgcatttttc
aacaaattttgagcttttcttcaactttaattgatccaacttgaagtatt
taacactaatgtgcattataataattccattaagctctttacaataaaaa
aaaccatgaaatagcttcatagagatgatctcacaacaaaatgtactgtc
atctaccagtatgacttctgttgactacttattaagagtgatagtgtttt
tttttggattgttcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-134D18.b_46_563 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| ||||||||||||  ||| ||||||||||||||||| |||||||
seq2  GTTATCATGTAGAAGAATGCAAATTGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||||||||||||||| |||||| |||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAGTAGATCAAAGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||| ||||||||||||||| |||||||| || | |||||
seq2  GGAAAAATTCCTGAGCAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      |||||||||| |||||||||||||||||||||||||| ||||||||||||
seq2  AGAAGGTGGATTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518

seq1: chr13_88006999_88008129
seq2: B6Ng01-134D18.g_65_1180

seq1  GAATTCCTGAAAGTTGTGTATCCAGCCAGAGTCAGTGTACCTGAAACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAAAGTTGTGTATCCAGCCAGAGTCAGTGTACCTGAAACACA  50

seq1  ACCCAACACCTCCACTTAAGTAAGATTCAGGAAATTCCATGAAAAAAAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAACACCTCCACTTAAGTAAGATTCAGGAAATTCCATGAAAAAAAGC  100

seq1  AGGATAAAGATTTACATATCCAAGGAGAAAGTCTGCTCATACCTTCTAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATAAAGATTTACATATCCAAGGAGAAAGTCTGCTCATACCTTCTAGA  150

seq1  TATGAGAGTGAAGCAACACCAAAAAAACTTAACATTATGGTTGCAAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGAGTGAAGCAACACCAAAAAAACTTAACATTATGGTTGCAAGAAA  200

seq1  AAGACCTGAACATTAACACCACTTTACATAAATAGTGTGAAAAATACTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCTGAACATTAACACCACTTTACATAAATAGTGTGAAAAATACTGG  250

seq1  ACAAGCCTCATCCCTAGAAGAAGATATAAAATCGACTGATGGCAGCTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGCCTCATCCCTAGAAGAAGATATAAAATCGACTGATGGCAGCTAAG  300

seq1  GATGACAACACGGTTTGTTTCCATCAGAGATAAGCCAATTCTAACTGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGACAACACGGTTTGTTTCCATCAGAGATAAGCCAATTCTAACTGTAA  350

seq1  AGTTTTGAATACATACAGGTAAGAAAAATATTAATTGAACTCAGTATTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTGAATACATACAGGTAAGAAAAATATTAATTGAACTCAGTATTGC  400

seq1  CAAATACAAATTTTTCTACAGCTTCAGAAAAAAGTTAATAAGTTGAGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATACAAATTTTTCTACAGCTTCAGAAAAAAGTTAATAAGTTGAGGCA  450

seq1  TTATCTTTAATACATACACTGACTTTTTAATGCTATGAAAACATGAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTTAATACATACACTGACTTTTTAATGCTATGAAAACATGAAATA  500

seq1  GGCAATACCAAAATAAAACATTATTTACAAATTTTCTGTTTTAATGTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAATACCAAAATAAAACATTATTTACAAATTTTCTGTTTTAATGTTAC  550

seq1  TAGAAGTACAATAATAGGTTTATTGTTCTGGCATTAAATTATGGAAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTACAATAATAGGTTTATTGTTCTGGCATTAAATTATGGAAGGAA  600

seq1  GATATCAGTAACGTTTTAATGACAGCTTAATAGAAGACTGTAAATACAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCAGTAACGTTTTAATGACAGCTTAATAGAAGACTGTAAATACAGT  650

seq1  TTTGGGTGATTTTCATTTATAAAAATACATCTCTCATTTAATTTGAATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTGATTTTCATTTATAAAAATACATCTCTCATTTAATTTGAATTG  700

seq1  AGAAGGAATTAGTACCAATTTTTTTTTTAATTTCTTCCACTGTGACCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGAATTAGTACCAATTTTTTTTTTAATTTCTTCCACTGTGACCAGA  750

seq1  GGGGAGATTTCCCATGGTAGTAGTGATTCTTTTTAAGCAAAGGGAAAACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGATTTCCCATGGTAGTAGTGATTCTTTTTAAGCAAAGGGAAAACT  800

seq1  TTTTTTTTATTACTTATCAAATTTTCAATAAAACCTTTAATATGTAACTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTATTACTTATCAAATTTTCAATAAAACCTTTAATATGTAACTA  850

seq1  TGTGTAACATCATATTTTACTAAAATTTTATAACTTTTATTGCATTTTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAACATCATATTTTACTAAAATTTTATAACTTTTATTGCATTTTTC  900

seq1  AACAAAATTTTTGAGCTTTTCTTCAACTTTAATTGATCCAACTTGAAGTA  950
      ||||||  ||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAA--TTTTGAGCTTTTCTTCAACTTTAATTGATCCAACTTGAAGTA  948

seq1  TTTTAACACTAATGTGCATTATAATAATTCCATTAAGCTCTTTTACAATA  1000
       ||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  -TTTAACACTAATGTGCATTATAATAATTCCATTAAGCTC-TTTACAATA  996

seq1  AAAAAAACCATGAAATAGCTTCAATAGGAAGATGATCCTCACAACAAAAT  1050
      |||||||||||||||||||||| ||||  ||||||| |||||||||||||
seq2  AAAAAAACCATGAAATAGCTTC-ATAG--AGATGAT-CTCACAACAAAAT  1042

seq1  GTACTGTCATCTACCAAGTATGACTTCTGTTGACTACTTATTAAGAGTGA  1100
      ||||||||||||||| ||||||||||||||||||||||||||||||||| 
seq2  GTACTGTCATCTACC-AGTATGACTTCTGTTGACTACTTATTAAGAGTG-  1090

seq1  ATAGTTGTTTTTTTTTTTTTGAATTGTTCAA  1131
      ||||     | |||||||||| |||||||||
seq2  ATAG-----TGTTTTTTTTTGGATTGTTCAA  1116