BAC Information

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BAC

Clone NameB6Ng01-134G02
Chromosome6 (Build37)18 (Build37)
Map Location 18,835,452 - 18,835,96872,534,844 - 72,535,708
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134G02.bB6Ng01-134G02.g
ACCDH934693DH934694
length960864
definitionDH934693|Mus musculus domesticus DNA, BAC clone: B6Ng01-134G02, 5' end.DH934694|Mus musculus domesticus DNA, BAC clone: B6Ng01-134G02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,452 - 18,835,968)(72,534,844 - 72,535,708)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatcttcacctccctagttagagtcacgccagatattttatattattt
gtgactattg
gaattcatttatccatgcaatatcccaatttctccaaaaaaccattattt
cccacatgtttgagctaaacagagagtgataatagagcatctcttgtgag
caaggaagcaagtgaatgctatttgatgagattgattcacagtaatgatg
atgatcttgctgatgacaatggtaaccgtgaattgtccctggtctgggaa
ttagaggcaataatatctcatttgcagaatagagctcttttttattataa
ctagataccatcacagtagatgcatattataaatagtatattcctttcca
atttccacaaaataatattgagacctcactatcgatgagaaataaccata
ttaatgcattcaaaaatttaaattaagtattgtaacttcactatgattta
ctctggcagattctgttagttatttgctcagtagcttttattccttgcta
caatccttgttggcaggctcttccttcaccacaggggctgacagaagaag
ctatttgcttcctcaaattttctttcatccaggccataggcaaaaggcac
aatgtgtcaagaacaatcagttagaaatctagaaaggcaattcttcccta
ttttatttgctgtagctatgtaaaggaaggaagccgaggcagacagcatg
tagcaaacaaaataagatcagtctcataatgaaaatcaacattttgagag
gtgcagaccaaatataaaacacccagagaagtggaccgagctttgtaaaa
agccgaggatgcttaatgctaagcatttaaaatggccaatatcaagcatt
tctattgtggttctctctttctctctctccctctccccctctccacccct
tccctccctctcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-134G02.b_48_565 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| |||||||||||||||||||||| |||||||
seq2  GTTATCGTGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| |||||||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518

seq1: chr18_72534844_72535708
seq2: B6Ng01-134G02.g_66_929

seq1  GAATTCATTTATCCATGCAATATCCCAATTTCTCCAAAAAACCATTATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTATCCATGCAATATCCCAATTTCTCCAAAAAACCATTATTT  50

seq1  CCCACATGTTTGAGCTAAACAGAGAGTGATAATAGAGCATCTCTTGTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACATGTTTGAGCTAAACAGAGAGTGATAATAGAGCATCTCTTGTGAG  100

seq1  CAAGGAAGCAAGTGAATGCTATTTGATGAGATTGATTCACAGTAATGATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAGCAAGTGAATGCTATTTGATGAGATTGATTCACAGTAATGATG  150

seq1  ATGATCTTGCTGATGACAATGGTAACCGTGAATTGTCCCTGGTCTGGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCTTGCTGATGACAATGGTAACCGTGAATTGTCCCTGGTCTGGGAA  200

seq1  TTAGAGGCAATAATATCTCATTTGCAGAATAGAGCTCTTTTTTATTATAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAGGCAATAATATCTCATTTGCAGAATAGAGCTCTTTTTTATTATAA  250

seq1  CTAGATACCATCACAGTAGATGCATATTATAAATAGTATATTCCTTTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATACCATCACAGTAGATGCATATTATAAATAGTATATTCCTTTCCA  300

seq1  ATTTCCACAAAATAATATTGAGACCTCACTATCGATGAGAAATAACCATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCACAAAATAATATTGAGACCTCACTATCGATGAGAAATAACCATA  350

seq1  TTAATGCATTCAAAAATTTAAATTAAGTATTGTAACTTCACTATGATTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATGCATTCAAAAATTTAAATTAAGTATTGTAACTTCACTATGATTTA  400

seq1  CTCTGGCAGATTCTGTTAGTTATTTGCTCAGTAGCTTTTATTCCTTGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCAGATTCTGTTAGTTATTTGCTCAGTAGCTTTTATTCCTTGCTA  450

seq1  CAATCCTTGTTGGCAGGCTCTTCCTTCACCACAGGGGCTGACAGAAGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTTGTTGGCAGGCTCTTCCTTCACCACAGGGGCTGACAGAAGAAG  500

seq1  CTATTTGCTTCCTCAAATTTTCTTTCATCCAGGCCATAGGCAAAAGGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGCTTCCTCAAATTTTCTTTCATCCAGGCCATAGGCAAAAGGCAC  550

seq1  AATGTGTCAAGAACAATCAGTTAGAAATCTAGAAAGGCAATTCTTCCCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGTCAAGAACAATCAGTTAGAAATCTAGAAAGGCAATTCTTCCCTA  600

seq1  TTTTATTTGCTGTAGCTATGTAAAGGAAGGAAGCCGAGGCAGACAGCATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTGCTGTAGCTATGTAAAGGAAGGAAGCCGAGGCAGACAGCATG  650

seq1  TAGCAAACAAAATAAGATCAGTCTCATAATGAAAATCAACATTTTGAGAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAACAAAATAAGATCAGTCTCATAATGAAAATCAACATTTTGAGAG  700

seq1  GTGCAGACCAAATATAAAACACCCAGAGAAGTGGACCGAGCTTTGTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGACCAAATATAAAACACCCAGAGAAGTGGACCGAGCTTTGTAAAA  750

seq1  AGCCGAGGATGCTTAATGCTAAGCATTTAAAATGGCCAATATCAAGCATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGAGGATGCTTAATGCTAAGCATTTAAAATGGCCAATATCAAGCATT  800

seq1  TCTATTGTGGTTCTCTCTTTCTCTCTCTCCCTCTCCCCCTCTCCACCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTGTGGTTCTCTCTTTCTCTCTCTCCCTCTCCCCCTCTCCACCCCT  850

seq1  TCCCCTCCCTCTCAA  865
      | |||||||||||||
seq2  T-CCCTCCCTCTCAA  864