BAC Information

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BAC

Clone NameB6Ng01-135A07
Chromosome6 (Build37)
Map Location 18,835,441 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135A07.bB6Ng01-135A07.g
ACCDH935172DH935173
length9831,004
definitionDH935172|Mus musculus domesticus DNA, BAC clone: B6Ng01-135A07, 5' end.DH935173|Mus musculus domesticus DNA, BAC clone: B6Ng01-135A07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagttctgagccccattttttaatggggttgttcgatt
ttctgaagttcaccttcttgagttctttatatgttggatattagccccct
atctgatttaggataggtaaagatcctttcccaatcagttggtggtcttt
ttgtcttattgacggtgtcttttgccttgcagaaactttggagtttcatg
aggtcccatttgtcaattctcgatcttacagcacaagccattgctgttca
gttcaggaatttctcccctgtgcccatatcttcaaggcttttccccactt
tctcctctataagtttcagtgtctctggttttatgtgaagttctttgatc
cacttagatttgaccttagtacaaggagataagtatggatcgattcgcat
tcttctacattataacaaccagttgtgccagcaccaattgttgaaaatgc
tgtctttcttccactggatggttttagctcccttgtcgaagatcaagtga
tcataggtgtgtgggttcatttctgggtcttcaattctattccattggtc
tacttgtctgtttctataccagtaccatgcagtttttatcacaattgctc
tgtagtaaagctttaggtcaggcatggtgattccaccagaggttctttta
tccttgagaagactttttgctatcctaggttttttgttattccagatgaa
tttgcaaattgctccttctaattcgttgaagaattgagttggaattttga
tggggattgcattgaatctgtagattgcttttggccagatagccattttt
acaatgttgatcctgccaatccatgagcatgggagatctttccatcttct
gagatcttctttaatttctttcttcagagatttgacgtttttatcataca
gatctttcacctcctatttagagttacaccaagatatttatactatttgt
gactatgagaggtgtgttccctaattctttctc

gaattcacgaactcttcagctggggaacagtggtaataaagtgttcccgt
aaaacagactgttgagaaggattcaactgcgtgaattcagaactcttcag
ctggggaacggtggtaatgaagtgttcccgtaaaacagactgttgagaag
gattcaactgcgtgaattcagaactcttcagctggggaacagggtacccg
taagtatagctttacaaggtaagtctggtcttgaactttctaacgaaatt
caagacagtctatcagaagtaaagtgggaaatagctttacaaggtacgtc
tggtcttgaactttctaacgaaattcaagacagtctatcagaagtaaagt
gggaaatagctttacaaggtatgtttggccttaaactttctctagtgtta
ggagcccttttgttccttttcacatgttatcaagcggttaaggcagggct
aaaaattctggatgaaattcagggcaatctatcagaagtaaagcggggag
agagagtaagagcaaagaggaaatatggtacacaaaataagtatacaggc
ctttccacgggtcttgaacctgaggaaaagtttaggtcaggtaagaatac
ctggggagagattgaaaggaagaaaaaggaaaaagaaaagaaaaaagatc
aattagaggaggtctctaggagaaggagcctatactcattactagatgag
ctcaggagccagttcttaatagttctgaatcagatgaaaaggctattagg
gcctggaagggctctcccgagcagtgaagccactggacactacaaaatcg
tcagagacctcaggagtccttctagatttgtggccgatgacgaggcagca
agcgtattttggagattcgagcaggcacacctctgttagacagtcattta
gagcaagcaccaggatgcgagcggccttagcctagaagaacaagttacag
actgtccagttgcggagctggcgggacctccacatggcaggctagcggcg
gcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835441_18835968
seq2: B6Ng01-135A07.b_48_574 (reverse)

seq1  CCCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAG  50
      |||||| ||||||||||||||||||| |||||||||||||||||||||||
seq2  CCCAGAAATGAACCCACACACCTATGATCACTTGATCTTCGACAAGGGAG  50

seq1  CTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGG  100

seq1  CACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATC  150
      ||||||||||||||||  |||||||||||| |||||||||||||||||||
seq2  CACAACTGGTTGTTATAATGTAGAAGAATGCGAATCGATCCATACTTATC  150

seq1  TCCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAAC  200
      ||| ||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TCCTTGTACTAAGGTCAAATCTAAGTGGATCAAAGAACTTCACATAAAAC  200

seq1  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGAT  250

seq1  ATGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGT  299
      ||||||| |||||| || ||||||||| ||||||||||||| ||||||||
seq2  ATGGGCACAGGGGAGAAATTCCTGAACTGAACAGCAATGGCTTGTGCTGT  300

seq1  GAGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCA  349
       || | |||||| |||||||||||||| ||||||||||||||||||||||
seq2  AAGATCGAGAATTGACAAATGGGACCTCATGAAACTCCAAAGTTTCTGCA  350

seq1  AGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAA  399
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACTGATTGGGAA  400

seq1  AGGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATA  449
      |||||||||||||||||||||||||||||||| ||||||||||||  |||
seq2  AGGATCTTTACCTATCCTAAATCAGATAGGGGGCTAATATCCAAC--ATA  448

seq1  TAAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATA  499
      ||||||||||||||||||| ||||||||||||| || ||||||||||| |
seq2  TAAAGAACTCAAGAAGGTGAACTTCAGAAAATCGAACAACCCCATTAAAA  498

seq1  AATGGGGCTCAGAACTGAACAAAGAATTC  528
      |||||||||||||||||||||||||||||
seq2  AATGGGGCTCAGAACTGAACAAAGAATTC  527


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