BAC Information

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BAC

Clone NameB6Ng01-135F24
Chromosome6 (Build37)
Map Location 40,106,941 - 40,107,571
singlet/doubletsinglet
Overlap geneEG434008
Upstream geneA630082K20Rik, Slc37a3, Rab19, Mkrn1, ENSMUSG00000068601, Dennd2a, Adck2, Ndufb2, Braf, Fth-ps2, Mrps33, LOC665247, LOC665254
Downstream geneAgk, E330009J07Rik, BC052883, Ssbp1, Tas2r137, Tas2r108, 1700016G05Rik, LOC669661, Olfr461, Olfr460, Clec5a, Tas2r138, Mgam, EG638904, Moxd2, LOC621968, BC048599, 1700074P13Rik, LOC194360, 1810009J06Rik, LOC100040208, 2210010C04Rik, LOC100039790, Tcrb-V8.2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135F24.bB6Ng01-135F24.g
ACCDH935428DH935429
length1,235696
definitionDH935428|Mus musculus domesticus DNA, BAC clone: B6Ng01-135F24, 5' end.DH935429|Mus musculus domesticus DNA, BAC clone: B6Ng01-135F24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaatgaaaatgaaggcacaacatatttgtggtggtttaaatatgc
ttggactatggaaagtggcactattaggaggtgtggccttgatagaggaa
ctgtgtcactgtaggcagatttgatgtctcctattgctctccgtgaggga
gagatcctccttctcgtggctgtctgtagaagagagtctactttctattg
ccctcagataaagatgtagaaatctcagctactcagcatcatgtctgcct
aaacactgccatgcttcctaccatgataataatggactaaacctctgtaa
ctgtaagccagccccaattaaatgtttgcctttataagagttgctttggt
catggtgtctatttacagcaatgaaaccctaactaagacaatgtccaaac
ttatgggacaaaataaaagctgtgctaagaggaaagttcatagcactaag
tgtttttataaagaaatttgagagatctcatgctaacaatttaaaatcag
gcctaaaatccctagaacaaacaaaaagcaaacacacccaagaagggtag
acagggctgaaatcaataaattagaaacaaagagaacaatacaaagaatc
aatgaaactaagagctggttctttgagaaaatcaacaagatagacaaatc
cttacctaaataaactaaaaggcagagagacagtgtccaaattaacaaaa
tcagaaataaaaagggagacagatgccatccaaagaataattaggtctta
cttcaaaagactgtaccccacaaaacttgaaaatctaaacaaaatgtatt
atagaattcttgatagattctacttaccaaagttaaatcaaggtcaggta
aacaatgtacagagtcctgtaattcctaaagaagtagagtcaatcatcaa
agtctcccaaccaaaaaatagcccaggaccagatagttttagcatgtaat
tctaccagatatccaaagaagaactatacaaatactcaaacttattcaca
aatagaaacagagaacattgccaaactcattctatgaagccacagttacc
ctgatacctaaaccaccacaaaaactgaacaagaagaattcagacattac
ctcctgaacatatgcaaaatactcattaaatactgtaactgatctagaaa
catcaaaggccttgaccagtccactcattcatagaaaggtccttggagag
aacaggatatacaaggcgtttaataccttcagaac
gaattcaaggacagtcgggtctacagtgtgagtggcaagacagccaaggc
taaatagaaaaaccctgattttgaagaagaggaggaagaggaggaggagg
aaggagaaagtagctttattccatgaatctttatttctcaacactcatta
aaaaacttctttttgcagtagataaatggtgagtaacacagagaccacaa
ctgatcaaggaatagagagtagcaggctgctgaatactcaacccttagtt
ggatacacacacacacacacacacaccacaacccttcatcccagtgatcc
cagactcagggatcattttagaatagggtgttggaaagggcataagagaa
agatgtgataactgtctcctggacatagcaggaaaattgtgagctcacac
aggctataacattgttcataagacctgtacaagctcaagccagacaaaag
cccaataagaactggaaggtagaacaaaatcccatccctagccaagagct
attgaaaattgatagctattgagaaagtcagttttgttgttgttattgtt
gttggtggtggtttgaactgtgttacctcttataagttgaccacattcca
gtggtcttcactccctcattcaaaacagcacaaattaattagatttgatg
ggtgttcaaaacacaaaaaaacgggacacaaagttggttgggtagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_40106941_40107571
seq2: B6Ng01-135F24.g_69_699

seq1  GAATTCAAGGACAGTCGGGTCTACAGTGTGAGTGGCAAGACAGCCAAGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAGGACAGTCGGGTCTACAGTGTGAGTGGCAAGACAGCCAAGGC  50

seq1  TAAATAGAAAAACCCTGATTTTGAAGAAGAGGAGGAAGAGGAGGAGGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGAAAAACCCTGATTTTGAAGAAGAGGAGGAAGAGGAGGAGGAGG  100

seq1  AAGGAGAAAGTAGCTTTATTCCATGAATCTTTATTTCTCAACACTCATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAAAGTAGCTTTATTCCATGAATCTTTATTTCTCAACACTCATTA  150

seq1  AAAAACTTCTTTTTGCAGTAGATAAATGGTGAGTAACACAGAGACCACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTTCTTTTTGCAGTAGATAAATGGTGAGTAACACAGAGACCACAA  200

seq1  CTGATCAAGGAATAGAGAGTAGCAGGCTGCTGAATACTCAACCCTTAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCAAGGAATAGAGAGTAGCAGGCTGCTGAATACTCAACCCTTAGTT  250

seq1  GGATACACACACACACACACACACACCACAACCCTTCATCCCAGTGATCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACACACACACACACACACACACCACAACCCTTCATCCCAGTGATCC  300

seq1  CAGACTCAGGGATCATTTTAGAATAGGGTGTTGGAAAGGGCATAAGAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTCAGGGATCATTTTAGAATAGGGTGTTGGAAAGGGCATAAGAGAA  350

seq1  AGATGTGATAACTGTCTCCTGGACATAGCAGGAAAATTGTGAGCTCACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTGATAACTGTCTCCTGGACATAGCAGGAAAATTGTGAGCTCACAC  400

seq1  AGGCTATAACATTGTTCATAAGACCTGTACAAGCTCAAGCCAGACAAAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTATAACATTGTTCATAAGACCTGTACAAGCTCAAGCCAGACAAAAG  450

seq1  CCCAATAAGAACTGGAAGGTAGAACAAAATCCCATCCCTAGCCAAGAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAATAAGAACTGGAAGGTAGAACAAAATCCCATCCCTAGCCAAGAGCT  500

seq1  ATTGAAAATTGATAGCTATTGAGAAAGTCAGTTTTGTTGTTGTTATTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAAATTGATAGCTATTGAGAAAGTCAGTTTTGTTGTTGTTATTGTT  550

seq1  GTTGGTGGTGGTTTGAACTGTGTTACCTCTTATAAGTTGACCACATTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTGGTGGTTTGAACTGTGTTACCTCTTATAAGTTGACCACATTCCA  600

seq1  GTGGTCTTCACTCCCTCATTCAAAACAGCAC  631
      |||||||||||||||||||||||||||||||
seq2  GTGGTCTTCACTCCCTCATTCAAAACAGCAC  631