BAC Information

Click to search

BAC

Clone NameB6Ng01-136D16
Chromosome2 (Build37)6 (Build37)
Map Location 23,063,988 - 23,064,12723,187,137 - 23,187,466
singlet/doubletsingletsinglet
Overlap gene4931423N10Rik
Upstream geneMyo3a, LOC100041703, Myo3a, Gad2, Apbb1ip, Pdss1, Abi1, 1200016E24Rik, Acbd5, Mastl, Yme1l1
Downstream geneLOC664835, Nxph2, LOC664822, 4921517N04Rik, LOC100039149, Sh3d2c-ps1, Hnmt, Tbpl2, Il1f8, LOC215253, Il1f9
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136D16.bB6Ng01-136D16.g
ACCDH936058DH936059
length942326
definitionDH936058|Mus musculus domesticus DNA, BAC clone: B6Ng01-136D16, 5' end.DH936059|Mus musculus domesticus DNA, BAC clone: B6Ng01-136D16, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(23,063,988 - 23,064,127)(23,187,137 - 23,187,466)
sequence
gaattcagtcaagttgtagaaagtaaaatcaacacacaaaagtcctcatc
gttatgagccattaaggaactaaaatagaaaacaagagaatactcctgca
tataataaatccaaaagtaaaagacagaggaccaaagtaaacaaagatat
gaaatatgtctgtagggaattcacaaaacattggtgaaagaattagacac
cataaacagaaagatgttcatgaaaatcagaagagtcgaactgttaaaat
atgtacattagtcaaaagcccccaatagattcaatgtgcttgtcatatat
tgaaattcttcaaagaagttttaaaaattaaatttatgaccctggccagt
ggtggtgcatgcctttaatcccagcagttgggaggcagaggcaggtggat
ttctgagttcaaggcaagcctggtctacagaatgagttccatgatagcca
gggttacacagagaaaccctgtctcaaaaataataataataaatttatat
ggaaacacaaattaaagtcaaatgactaacactatttgaatagacagaac
aaactaacaattatactatcttatgcctaaatatactacaaagttgtagt
catgaaaacagcatggcataagcataaaaatagacccagaggctaaagta
aatgaacagagaaccaagaagtaactccatctgtctacagccacttgatc
ttcagaaatggcattaagaacatgttctgaaagaagagaaggtctttcaa
tgactacctgtgggaaaattcaatatttacatttagagaagtgaaaatag
aaatccaccttgtgtcacttaaatcaattaaataaactcaatatgaatta
aaaacttaaatgtaagttctaaaactaaggtactgcctgaataaaatgta
gggaaaacaggctaggacatgcatgagatggggcagagattt
tttgttcagctctgagccccatgttttaagggggttatttgattttctgg
agtccaccctcttgagttctttatatatattggatattagtcccctatct
gattaagataggtaaagatccttttccaatctgttggtggtctttttgtc
ttattgacggtgtcttttgccttgcagaagctttgcagtttcatgaggtc
ccatttgtcaatcctcgatcttacagcacaagccattgctgttctattca
ggattttttccgtgtgcccatatcttcgagacttttccccactttctcct
ctataagtttcagtttctctggtttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_23063988_23064127
seq2: B6Ng01-136D16.b_390_526 (reverse)

seq1  TTTTCGAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACT  50
      |||| ||||||||||||||||||||| |||||||| || ||||||||| |
seq2  TTTTTGAGACAGGGTTTCTCTGTGTAACCCTGGCTATCATGGAACTCATT  50

seq1  CTGTAGACCAGGCTAGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCC  100
      |||||||||||||| |||| |||||||||||||| |||||||||||||||
seq2  CTGTAGACCAGGCTTGCCTTGAACTCAGAAATCCACCTGCCTCTGCCTCC  100

seq1  GGAGTGCTGGGATTAAAGGCGTGCGCCACCACACCTGGCC  140
        | |||||||||||||||| ||| ||||||   ||||||
seq2  CAACTGCTGGGATTAAAGGCATGCACCACCA---CTGGCC  137

seq1: chr6_23187137_23187466
seq2: B6Ng01-136D16.g_71_397 (reverse)

seq1  AAAACCAGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTCA  50
      ||||||||||| ||||||||||||||||||||||||||||||||| ||| 
seq2  AAAACCAGAGAAACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGTCTCG  50

seq1  AAGATATGGGCACAGGGGGGGAAATTCCTGAATAGAACAGCAGTGGCTTG  100
      ||||||||||||||   ||  ||| ||||||||||||||||| |||||||
seq2  AAGATATGGGCACA--CGGAAAAAATCCTGAATAGAACAGCAATGGCTTG  98

seq1  TGCTGTAAGATCGAGAATTGACAAATGGGACCTCATAAAACTGCAAAGCT  150
      ||||||||||||||| |||||||||||||||||||| |||||||||||||
seq2  TGCTGTAAGATCGAGGATTGACAAATGGGACCTCATGAAACTGCAAAGCT  148

seq1  TCTGTAAGGCAAAAGACACGGTCAATAAGACAAAAAGGCTACCAACAGAT  200
      |||| |||||||||||||| ||||||||||||||||| | ||||||||||
seq2  TCTGCAAGGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGAT  198

seq1  TGGGAAAGGATCTTTGCCTATCCTAAATCAGATAGGGGAATAATGTCCAA  250
      ||| ||||||||||| ||||| || |||||||||||||| |||| |||||
seq2  TGGAAAAGGATCTTTACCTAT-CTTAATCAGATAGGGGACTAATATCCAA  247

seq1  TATATATAAAGAACTCAAGGAGGTAGACTCCAGAAAATCAAATAACCCCA  300
      |||||||||||||||||||  ||| |||||||||||||||||||||||| 
seq2  TATATATAAAGAACTCAAGAGGGTGGACTCCAGAAAATCAAATAACCCCC  297

seq1  TTAAAAAATGGGGCTCAGAGCTAAACAAAG  330
      |||||| ||||||||||||||| |||||||
seq2  TTAAAACATGGGGCTCAGAGCTGAACAAAG  327