BAC Information

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BAC

Clone NameB6Ng01-137L07
Chromosome6 (Build37)
Map Location 35,070,283 - 35,208,588
singlet/doubletdoublet
Overlap geneCnot4, Nup205, 1810058I24Rik
Upstream geneLrguk, Slc35b4, Akr1b3, Akr1b8, LOC664942, 2310005E10Rik, Akr1b7, Bpgm, LOC100039184, Cald1, Agbl3, Tmem140, 3110062M04Rik, 9530020G05Rik, Stra8, 2010107G12Rik
Downstream geneSlc13a4, BC064033, 1700065J11Rik, Mtpn, LOC100039312, LOC100039327, 9330158H04Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137L07.bB6Ng01-137L07.g
ACCDH937149DH937150
length1,1981,018
definitionDH937149|Mus musculus domesticus DNA, BAC clone: B6Ng01-137L07, 5' end.DH937150|Mus musculus domesticus DNA, BAC clone: B6Ng01-137L07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(35,207,388 - 35,208,588)(35,070,283 - 35,071,306)
sequence
gaattcctaattcttacaatgtgtgtctcaaaataaacactgcctaacta
actattttgtcaatgtcaccaagcactggggcagaaaaggggacagttat
tttagaagacaaacaaaacccatggcctctatacgcggcacccgttccag
aatactaccaaatctacaacgcgacattttaaatatgatgcagagcacat
gtgagaagtgccactcactcaggaaaatgatggagaacccagaagtcagg
aaagcgtgcttgcttcaggagatggtcaacaggtaggagcagacaagaaa
agcaaatctaaacctggacatctgtatgcacagccaaacagtcctgcata
gtcacgtgtacatacacacacgaaatataaaaatgtttgcccttcaaata
acagcatcaaagagaaaggacaaaccacaaaatagaattatttgcaaatc
ataatctggtctttcacaattaaatgacggagatacataattcaatttaa
aaagtggcagaagctgtgagtggatcctccaaagacacggagtcaacaag
cccacgagatgtttgacatcagtcaccgaggaaacgctaatcaaaaccac
gaggaaccacggcacatccgcttagatggctttactcaaaagcagcaaaa
ccaaaccaaacaaaacaaacaacaaatgctggcaagacatggggcggagg
tcttcatcttccactggtgtataacacatggccgctctgaaaaaccatct
agccactttccagagtgctgtgtgcacagttataggatgtgacaactcca
gtgtgggcatgcaccaaaaggtggacatgaacccccacaaaaatgcctcc
tcaatattcctggcttagcccattcctaacaacctagagcggaaacaact
ggagagctgattaacacatactcatcatatcgagaaatgaagcgctcact
gctccatgctgtcagtaagaggagccttgacagtgcagtcaagtgcagtc
agaaagaacacatactgtatggttctattaaaaaaaaaataacaaaacag
ccatttccacattgaatagaaaaccactgttgatttgtccagttttgaga
gggatgagaattgactccctttattttacaggttctttttatgtaaatgg
aagtaccgattctctgagcacactggagcccacggaatacatacaata
gaattcctgcaagccagtcagtcctatgatcattcctcaaacacactgct
tgtatttccatttgcccaaataactactggaaacatatatccatttccta
caaaaacaagacaaacaaacaacaaaaacaaaaacaaaaaaagtgtattg
aatataaagacttaacttcaaagttgaaagtttcttgtttctttcaaatg
tattctaacagcaaacctttatccagggcttactttgtgccctggataga
ataccttactagaaataccattctaataaattagctcatttattgtacaa
aacaatcctagatattttgtataaatgataaaactgagacttagttaagt
atctatctgtcctaggttaggaagtgattgtaagtggtagagccaactca
ccctgtctgattctatccaaaactgcacctgcctacagaaacaatgaata
aaaccaaaaagagttcaaaggactcatactgaaaactacaggctaactga
atacaatattcaactattaaaaatttatctcagggatggaaagacagctc
agcagttaagaatactaagtgttcttgtaagaggacatgagttcaattca
cagcacctacaaagcagctcatagccgtatgtaactccagtcacagaaaa
tgtgatacatcttctggcagcagcacccacacaatccttaaatatacata
taggtaaacacccatacatcatctaagactggatatggtaatacacacct
ttatttccagcattggggaggcagagcacatggatctctgtgagttcaag
actaccctcgtctatataatgagttctaagctagatgatgttctaattct
aggctagataatgagaaccctgcttcaaataaaaacataataaaaatcat
ctaagttagtccttatcctaaatacttagagcatatttattttagtatca
tgacaaggtttttattattttagatatttctttgtgtatgtgtgtttgtg
tgtgtgtgaggagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_35207388_35208588
seq2: B6Ng01-137L07.b_47_1244 (reverse)

seq1  TATTGTATGTAATCCAGTGGCTTCAGTGTGCTCAGAG-ATCGTGTACCTT  49
      ||||||||||| |||   |||| |||||||||||||| |||| ||| |||
seq2  TATTGTATGTATTCCGTGGGCTCCAGTGTGCTCAGAGAATCG-GTA-CTT  48

seq1  CTCATTTTACATAAAAAAGAAACTGTATAATATAGGGAGTCATTTCTCAT  99
      | || ||||||| |||||||| ||||| |||| ||||||||| |||||||
seq2  C-CA-TTTACAT-AAAAAGAACCTGTAAAATAAAGGGAGTCAATTCTCAT  95

seq1  TCCCCTCTCCAAACTGGAC-AATCAACAGTTGGTTTTCTA-TCAATGTGG  147
        ||||||| ||||||||| ||||||||| |||||||||| |||||||||
seq2  --CCCTCTCAAAACTGGACAAATCAACAG-TGGTTTTCTATTCAATGTGG  142

seq1  -AATTGCTGTTTTG-TATTTTTTTTTTAATAGAACCATACAGTATGTGGT  195
       ||| ||||||||| ||||||||||||||||||||||||||||||||| |
seq2  AAATGGCTGTTTTGTTATTTTTTTTTTAATAGAACCATACAGTATGTGTT  192

seq1  CTTTTCTGACTGCCCTTGACTGCACTGTCAAGGCTCCTC-TACTGACAGC  244
      | ||||||||||| ||||||||||||||||||||||||| ||||||||||
seq2  C-TTTCTGACTGCACTTGACTGCACTGTCAAGGCTCCTCTTACTGACAGC  241

seq1  ATGGAGCAGTGAGCGCTTCATTTCTCGATATGATGAGTATGTGTTAATCA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGCAGTGAGCGCTTCATTTCTCGATATGATGAGTATGTGTTAATCA  291

seq1  GCTCTCCAGTTGTTTCCGCTCTTGGTTGTTAGGAATGGGCTAAGCCAGGA  344
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  GCTCTCCAGTTGTTTCCGCTCTAGGTTGTTAGGAATGGGCTAAGCCAGGA  341

seq1  ATATTGAGGAGGCATTTTTGTGGGGGTTCATGTCCACCTTTTGGTGCATG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGAGGAGGCATTTTTGTGGGGGTTCATGTCCACCTTTTGGTGCATG  391

seq1  CCCACACTGGAGTTGTCACATCCTATAACTGTGCACACAGCACTCTGGAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACACTGGAGTTGTCACATCCTATAACTGTGCACACAGCACTCTGGAA  441

seq1  AGTGGCTAGATGGTTTTTCAGAGCGGCCATGTGTTATACACCAGTGGAAG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTAGATGGTTTTTCAGAGCGGCCATGTGTTATACACCAGTGGAAG  491

seq1  ATGAAGACCTCCGCCCCATGTCTTGCCAGCATTTGTTGTTTGTTTTGTTT  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGACCTCCGCCCCATGTCTTGCCAGCATTTGTTGTTTGTTTTGTTT  541

seq1  GGTTTGGTTTTGCTGCTTTTGAGTAAAGCCATCTAAGCGGATGTGCCGTG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGGTTTTGCTGCTTTTGAGTAAAGCCATCTAAGCGGATGTGCCGTG  591

seq1  GTTCCTCGTGGTTTTGATTAGCGTTTCCTCGGTGACTGATGTCAAACATC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTCGTGGTTTTGATTAGCGTTTCCTCGGTGACTGATGTCAAACATC  641

seq1  TCGTGGGCTTGTTGACTCCGTGTCTTTGGAGGATCCACTCACAGCTTCTG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGGGCTTGTTGACTCCGTGTCTTTGGAGGATCCACTCACAGCTTCTG  691

seq1  CCACTTTTTAAATTGAATTATGTATCTCCGTCATTTAATTGTGAAAGACC  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTTTTAAATTGAATTATGTATCTCCGTCATTTAATTGTGAAAGACC  741

seq1  AGATTATGATTTGCAAATAATTCTATTTTGTGGTTTGTCCTTTCTCTTTG  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTATGATTTGCAAATAATTCTATTTTGTGGTTTGTCCTTTCTCTTTG  791

seq1  ATGCTGTTATTTGAAGGGCAAACATTTTTATATTTCGTGTGTGTATGTAC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTTATTTGAAGGGCAAACATTTTTATATTTCGTGTGTGTATGTAC  841

seq1  ACGTGACTATGCAGGACTGTTTGGCTGTGCATACAGATGTCCAGGTTTAG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGACTATGCAGGACTGTTTGGCTGTGCATACAGATGTCCAGGTTTAG  891

seq1  ATTTGCTTTTCTTGTCTGCTCCTACCTGTTGACCATCTCCTGAAGCAAGC  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTTTTCTTGTCTGCTCCTACCTGTTGACCATCTCCTGAAGCAAGC  941

seq1  ACGCTTTCCTGACTTCTGGGTTCTCCATCATTTTCCTGAGTGAGTGGCAC  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCTTTCCTGACTTCTGGGTTCTCCATCATTTTCCTGAGTGAGTGGCAC  991

seq1  TTCTCACATGTGCTCTGCATCATATTTAAAATGTCGCGTTGTAGATTTGG  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCACATGTGCTCTGCATCATATTTAAAATGTCGCGTTGTAGATTTGG  1041

seq1  TAGTATTCTGGAACGGGTGCCGCGTATAGAGGCCATGGGTTTTGTTTGTC  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATTCTGGAACGGGTGCCGCGTATAGAGGCCATGGGTTTTGTTTGTC  1091

seq1  TTCTAAAATAACTGTCCCCTTTTCTGCCCCAGTGCTTGGTGACATTGACA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAATAACTGTCCCCTTTTCTGCCCCAGTGCTTGGTGACATTGACA  1141

seq1  AAATAGTTAGTTAGGCAGTGTTTATTTTGAGACACACATTGTAAGAATTA  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGTTAGTTAGGCAGTGTTTATTTTGAGACACACATTGTAAGAATTA  1191

seq1  GGAATTC  1201
      |||||||
seq2  GGAATTC  1198

seq1: chr6_35070283_35071306
seq2: B6Ng01-137L07.g_69_1086

seq1  GAATTCCTGCAAGCCAGTCAGTCCTATGATCATTCCTCAAACACACTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGCAAGCCAGTCAGTCCTATGATCATTCCTCAAACACACTGCT  50

seq1  TGTATTTCCATTTGCCCAAATAACTACTGGAAACATATATCCATTTCCTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTCCATTTGCCCAAATAACTACTGGAAACATATATCCATTTCCTA  100

seq1  CAAAAACAAGACAAACAAACAACAAAAACAAAAACAAAAAAAGTGTATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAACAAGACAAACAAACAACAAAAACAAAAACAAAAAAAGTGTATTG  150

seq1  AATATAAAGACTTAACTTCAAAGTTGAAAGTTTCTTGTTTCTTTCAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAAGACTTAACTTCAAAGTTGAAAGTTTCTTGTTTCTTTCAAATG  200

seq1  TATTCTAACAGCAAACCTTTATCCAGGGCTTACTTTGTGCCCTGGATAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTAACAGCAAACCTTTATCCAGGGCTTACTTTGTGCCCTGGATAGA  250

seq1  ATACCTTACTAGAAATACCATTCTAATAAATTAGCTCATTTATTGTACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACCTTACTAGAAATACCATTCTAATAAATTAGCTCATTTATTGTACAA  300

seq1  AACAATCCTAGATATTTTGTATAAATGATAAAACTGAGACTTAGTTAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATCCTAGATATTTTGTATAAATGATAAAACTGAGACTTAGTTAAGT  350

seq1  ATCTATCTGTCCTAGGTTAGGAAGTGATTGTAAGTGGTAGAGCCAACTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTGTCCTAGGTTAGGAAGTGATTGTAAGTGGTAGAGCCAACTCA  400

seq1  CCCTGTCTGATTCTATCCAAAACTGCACCTGCCTACAGAAACAATGAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTCTGATTCTATCCAAAACTGCACCTGCCTACAGAAACAATGAATA  450

seq1  AAACCAAAAAGAGTTCAAAGGACTCATACTGAAAACTACAGGCTAACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAAAAGAGTTCAAAGGACTCATACTGAAAACTACAGGCTAACTGA  500

seq1  ATACAATATTCAACTATTAAAAATTTATCTCAGGGATGGAAAGACAGCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAATATTCAACTATTAAAAATTTATCTCAGGGATGGAAAGACAGCTC  550

seq1  AGCAGTTAAGAATACTAAGTGTTCTTGTAAGAGGACATGAGTTCAATTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTTAAGAATACTAAGTGTTCTTGTAAGAGGACATGAGTTCAATTCA  600

seq1  CAGCACCTACAAAGCAGCTCATAGCCGTATGTAACTCCAGTCACAGAAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCACCTACAAAGCAGCTCATAGCCGTATGTAACTCCAGTCACAGAAAA  650

seq1  TGTGATACATCTTCTGGCAGCAGCACCCACACAATCCTTAAATATACATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATACATCTTCTGGCAGCAGCACCCACACAATCCTTAAATATACATA  700

seq1  TAGGTAAACACCCATACATCATCTAAGACTGGATATGGTAATACACACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAAACACCCATACATCATCTAAGACTGGATATGGTAATACACACCT  750

seq1  TTATTTCCAGCATTGGGGAGGCAGAGCACATGGATCTCTGTGAGTTCAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTCCAGCATTGGGGAGGCAGAGCACATGGATCTCTGTGAGTTCAAG  800

seq1  ACTACCCTCGTCTATATAATGAGTTCTAAGCTAGATGATGTTCTAATTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACCCTCGTCTATATAATGAGTTCTAAGCTAGATGATGTTCTAATTCT  850

seq1  AGGCTAGATAATGAGAACCTTGCTTCAAAATAAAAACATAATAAAAATCA  900
      ||||||||||||||||||| |||||| |||||||||||||||||||||||
seq2  AGGCTAGATAATGAGAACCCTGCTTC-AAATAAAAACATAATAAAAATCA  899

seq1  TCTAAGTTAGTCCTTTATCCTAAATACTTAAGAGCATATTTATTTTAGTA  950
      ||||||||||||| ||||||||||||||| ||||||||||||||||||||
seq2  TCTAAGTTAGTCC-TTATCCTAAATACTT-AGAGCATATTTATTTTAGTA  947

seq1  TCATGACAAGGTTTTTTATTATTTTAGATATTTTCTTTGTGTATGTGTGT  1000
      ||||||||||| |||||||||||||||||| |||||||||||||||||||
seq2  TCATGACAAGG-TTTTTATTATTTTAGATA-TTTCTTTGTGTATGTGTGT  995

seq1  ATGTGTGTGTGTGAGAGAGAGAGA  1024
       |||||||||||||| ||||||||
seq2  TTGTGTGTGTGTGAG-GAGAGAGA  1018