BAC Information

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BAC

Clone NameB6Ng01-137M21
Chromosome6 (Build37)18 (Build37)
Map Location 18,835,868 - 18,836,51651,297,778 - 51,298,461
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137M21.bB6Ng01-137M21.g
ACCDH937225DH937226
length992961
definitionDH937225|Mus musculus domesticus DNA, BAC clone: B6Ng01-137M21, 5' end.DH937226|Mus musculus domesticus DNA, BAC clone: B6Ng01-137M21, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,868 - 18,836,516)(51,297,778 - 51,298,461)
sequence
gaattcctttgtgaatgtgttgcctcactcaggatgatgccctccaggtc
catccatttggctaggaatttcataaattcattctttttaatagctgagt
agtactccattgtgtagatgtaccacattttctgtatccattcctctgtt
gaggggcatctaggttctttccagcttctggctattataaataaggctgc
tatgaagatagtggagcatgtgtccttcttaccagttggggcatcttctg
gatatatgtccaggagaggtattgctggatcctccggtagtactatgtcc
aattttctgaggaaccgccagactgatttccagagtggttgtacaagcct
gcaatcccaccaacaatggaggagtgttcctctttctccacatccacgcc
agcatctgctgtcacctgaatttttgatcttagccattctgactggtgtg
aggtggaatctcagggttgttttgatttgcatttccctgatgattaagga
tgttgaacattttttcaggtgcttctctgccattcggtattcctcaggtg
agaattctttgttcagttctgagccccattttttaatggggttatttgat
tttctgaagtccaccttcttgagttctttatatatgttggatattagtcc
ccaagaaaacccagtgcttttacctggtgagtcatcttttcagcaccagt
tcaatatgcttcaataaattaaatttataataagaactctctataagata
ttgaaccatgtttgaaatcagtggttggaggacataggacttcatttaca
gtattatgttcttgacagtgaataactttcaagataggcatggccacttg
gcttcaaactgtaactagaaaggacactaatcccaagcctatggtcttcc
ttaggattatgctactacaaatacagacactagacagactcaaagcatca
tagtatatgctatgctttgtaaagtagacttcatcaaatgca
gaattcacacatacaacacatgctgtacacttaaaaattatagttttgta
actagtttttcttatgtgtttggtcttcagtccaaagacaacagaaaagt
agtattcattgcaacagacaattttatgaaaaaatgtacatttctctgta
ttaattaattagacttaataagttgatgctgcttcattttaaatttaagc
tttcagtctgagataattgtagattcacatgcatgtgtgtaaagagaatt
gctggagacctcttgaccttctccagtgctctccatggaactatctttca
aatctgtagcaaaatatactaactgggatattgacatcaatggagttggg
attcaaaatttccaatgaataaaaggattttaccagggtcttttacaacg
ttcccaacatcactaacatgtccattcatgccctaaccactcacaacctt
tttctgtaaattttcttttgtgagatagttatagttgaaatgtaaatgaa
gaaaatatctaataaaaatgactaaaaatagttataatataaaatcaaat
tatatgtactattatgaacctttgttcatcttatataatcatctatgaat
caatattttccaacaatttatttatttttgctgtttactagtccatcacg
gtacggatgcaccatccactgttgagcattcgcatgttgacagacatctg
tgttgacagtttaggattctgctgagcaaagctggggtgaatatgtatgt
acgagttttcaaatgagcataagtcaccttttctgttggaaatactgccc
aagcatgtaatttccagatcatgcagcagttccctatgtagattctttag
aaacaatcaactgtgttcactggggttgtatcattttttcagcctgactt
gctctgcatgtgctaaagtttcagttgctctctttctctgacagcagtga
atctgctgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835868_18836516
seq2: B6Ng01-137M21.b_52_700 (reverse)

seq1  GGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGACTAATATCCAACATATATAAAGAACTCAAGAAGGTGGACTTCAGA  50

seq1  AAATCAAATAACCCCATTAATAAATGGGGCTCAGAACTGAACAAAGAATT  100
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAATT  100

seq1  CTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCAA  150

seq1  CATCCTTAATCATCAGGGAAATGGAAATCAAAACAACCCTGAGATTCCAC  200
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCAC  200

seq1  CTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATG  250

seq1  CTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATT  300

seq1  GCAGGCTTGTACAACCACTCTGGAAATCCGTCTGGCGGTTGCTCAGAAAA  350
      |||||||||||||||||||||||||||| ||||||||||| |||||||||
seq2  GCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAA  350

seq1  TTGGACATAGTACTACTGGAGGATCCAGCATTACCTCTCCTGGGCATATA  400
      |||||||||||||||| ||||||||||||| |||||||||||| ||||||
seq2  TTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGACATATA  400

seq1  TCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATCTTCA  450

seq1  TAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCC  500
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCTAGATGCCCC  500

seq1  TCAACAGAGGAATGGATACAGAAAATGTGGTACATTTACACAATGGAGTA  550
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTA  550

seq1  CTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGA  600

seq1  TGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGGAA  649
      |||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGGACCTGGAGGGCATCATCCTGAGTGAGGCAACACATTCACAAAGGAA  649

seq1: chr18_51297778_51298461
seq2: B6Ng01-137M21.g_68_751

seq1  GAATTCACACATACAACACATGCTGTACACTTAAAAATTATAGTTTTGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACATACAACACATGCTGTACACTTAAAAATTATAGTTTTGTA  50

seq1  ACTAGTTTTTCTTATGTGTTTGGTCTTCAGTCCAAAGACAACAGAAAAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGTTTTTCTTATGTGTTTGGTCTTCAGTCCAAAGACAACAGAAAAGT  100

seq1  AGTATTCATTGCAACAGACAATTTTATGAAAAAATGTACATTTCTCTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTCATTGCAACAGACAATTTTATGAAAAAATGTACATTTCTCTGTA  150

seq1  TTAATTAATTAGACTTAATAAGTTGATGCTGCTTCATTTTAAATTTAAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAATTAGACTTAATAAGTTGATGCTGCTTCATTTTAAATTTAAGC  200

seq1  TTTCAGTCTGAGATAATTGTAGATTCACATGCATGTGTGTAAAGAGAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTCTGAGATAATTGTAGATTCACATGCATGTGTGTAAAGAGAATT  250

seq1  GCTGGAGACCTCTTGACCTTCTCCAGTGCTCTCCATGGAACTATCTTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGACCTCTTGACCTTCTCCAGTGCTCTCCATGGAACTATCTTTCA  300

seq1  AATCTGTAGCAAAATATACTAACTGGGATATTGACATCAATGGAGTTGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTGTAGCAAAATATACTAACTGGGATATTGACATCAATGGAGTTGGG  350

seq1  ATTCAAAATTTCCAATGAATAAAAGGATTTTACCAGGGTCTTTTACAACG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAAATTTCCAATGAATAAAAGGATTTTACCAGGGTCTTTTACAACG  400

seq1  TTCCCAACATCACTAACATGTCCATTCATGCCCTAACCACTCACAACCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAACATCACTAACATGTCCATTCATGCCCTAACCACTCACAACCTT  450

seq1  TTTCTGTAAATTTTCTTTTGTGAGATAGTTATAGTTGAAATGTAAATGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTAAATTTTCTTTTGTGAGATAGTTATAGTTGAAATGTAAATGAA  500

seq1  GAAAATATCTAATAAAAATGACTAAAAATAGTTATAATATAAAATCAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATATCTAATAAAAATGACTAAAAATAGTTATAATATAAAATCAAAT  550

seq1  TATATGTACTATTATGAACCTTTGTTCATCTTATATAATCATCTATGAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGTACTATTATGAACCTTTGTTCATCTTATATAATCATCTATGAAT  600

seq1  CAATATTTTCCAACAATTTATTTATTTTTGCTGTTTACTAGTCCATCACG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATTTTCCAACAATTTATTTATTTTTGCTGTTTACTAGTCCATCACG  650

seq1  GTACGGATGCACCATCCACTGTTGAGCATTCGCA  684
      ||||||||||||||||||||||||||||||||||
seq2  GTACGGATGCACCATCCACTGTTGAGCATTCGCA  684