BAC Information

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BAC

Clone NameB6Ng01-138M20
Chromosome6 (Build37)7 (Build37)
Map Location 18,835,452 - 18,835,96867,364,754 - 67,365,666
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-138M20.bB6Ng01-138M20.g
ACCDH937956DH937957
length942929
definitionDH937956|Mus musculus domesticus DNA, BAC clone: B6Ng01-138M20, 5' end.DH937957|Mus musculus domesticus DNA, BAC clone: B6Ng01-138M20, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,452 - 18,835,968)(67,364,754 - 67,365,666)
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatgggaattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagtttttatcata
cagatctttcacttccttcgtagagtcacgccgagatatttt
gaattcccaagatcctatgctgtactttgatacaaccaaaatgtctcaag
aagactatgttgaagtttcttttgctatcataaataacagatttactgac
attgtaaaagttgtaattagtattaaaataaacacaaactgcttaaaata
attgagagcgcacatgcaaacataaggtaattggtataatattttaaggt
ggataatgtggcactaaagtaaatatctgctataaaagtttgcctctcat
attttggtttacagtcattttggcaaaagtatttaaaaaactgtaggatt
caaacatcctgtgttagacatacacattgtatttaagaagtcagattgaa
attaatattttaaaatattctacaaacctctcaaaaattctatgaaaaat
tcattttaaacttggtccaattgttgaaaatgctgtcttttttccactgg
acggttttagctcccttgtcaaagatcaagtcaccatgggtgtgtgggtt
catctctgggtgttcaattctgttccattggtctacttgtctgtcgctat
accagtaccatgcagtttttattacaattgctctgtagtacagctttagg
tcgggcatggtgattccaccagaggttcttttatccttgagaagagtttt
tgctatcctaggttttttgttattccagatgaatctgccgattgcccttt
ctaattcgttgaagaattgagtggaattttgatggggattgcactgaatc
tgtagattgcttttggcaggatagccatttttactatattgatcctgcca
atccatgagcatgggagatctttccatcttctgagatcttctttaatttc
tttcttcagagacatgaagttcttgtcatacagatttttcacctccctag
ttagagtcacgcctagtatttatatattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835452_18835968
seq2: B6Ng01-138M20.b_47_564 (reverse)

seq1  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAACCATC  50
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCCAAAACCATC  50

seq1  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACTGGTT  100

seq1  GTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGTACTA  150
      |||||| |||||||||||| |||||||||||||||||||||| |||||||
seq2  GTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGTACTA  150

seq1  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGACACTG  200

seq1  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCAGAGG  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCACAGG  250

seq1  GGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAGAGAA  299
      |||||| ||||||||||||||||||||||| |||||||| || | |||||
seq2  GGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCGAGAA  300

seq1  TCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAAAGAC  350

seq1  ACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCTTTAC  399
      || ||| ||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAAGGATCTTTAC  400

seq1  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAACTCA  450

seq1  AGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGGCTCA  499
      ||||||||||| |||||||||||||||||||| |||| ||||||||||||
seq2  AGAAGGTGGACCTCAGAAAATCAAATAACCCCCTTAAAAAATGGGGCTCA  500

seq1  GAACTGAACAAAGAATTC  517
      ||||||||||||||||||
seq2  GAACTGAACAAAGAATTC  518

seq1: chr7_67364754_67365666
seq2: B6Ng01-138M20.g_67_979

seq1  GAATTCCCAAGATCCTATGCTGTACTTTGATACAACCAAAATGTCTCAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAAGATCCTATGCTGTACTTTGATACAACCAAAATGTCTCAAG  50

seq1  AAGACTATGTTGAAGTTTCTTTTGCTATCATAAATAACAGATTTACTGAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTATGTTGAAGTTTCTTTTGCTATCATAAATAACAGATTTACTGAC  100

seq1  ATTGTAAAAGTTGTAATTAGTATTAAAATAAACACAAACTGCTTAAAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTAAAAGTTGTAATTAGTATTAAAATAAACACAAACTGCTTAAAATA  150

seq1  ATTGAGAGCGCACATGCAAACATAAGGTAATTGGTATAATATTTTAAGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAGAGCGCACATGCAAACATAAGGTAATTGGTATAATATTTTAAGGT  200

seq1  GGATAATGTGGCACTAAAGTAAATATCTGCTATAAAAGTTTGCCTCTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAATGTGGCACTAAAGTAAATATCTGCTATAAAAGTTTGCCTCTCAT  250

seq1  ATTTTGGTTTACAGTCATTTTGGCAAAAGTATTTAAAAAACTGTAGGATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGTTTACAGTCATTTTGGCAAAAGTATTTAAAAAACTGTAGGATT  300

seq1  CAAACATCCTGTGTTAGACATACACATTGTATTTAAGAAGTCAGATTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATCCTGTGTTAGACATACACATTGTATTTAAGAAGTCAGATTGAA  350

seq1  ATTAATATTTTAAAATATTCTACAAACCTCTCAAAAATTCTATGAAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATATTTTAAAATATTCTACAAACCTCTCAAAAATTCTATGAAAAAT  400

seq1  TCATTTTAAACTTGGTCCAATTGTTGAAAATGCTGTCTTTTTTCCACTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTTAAACTTGGTCCAATTGTTGAAAATGCTGTCTTTTTTCCACTGG  450

seq1  ACGGTTTTAGCTCCCTTGTCAAAGATCAAGTCACCATGGGTGTGTGGGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTTTTAGCTCCCTTGTCAAAGATCAAGTCACCATGGGTGTGTGGGTT  500

seq1  CATCTCTGGGTGTTCAATTCTGTTCCATTGGTCTACTTGTCTGTCGCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCTGGGTGTTCAATTCTGTTCCATTGGTCTACTTGTCTGTCGCTAT  550

seq1  ACCAGTACCATGCAGTTTTTATTACAATTGCTCTGTAGTACAGCTTTAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTACCATGCAGTTTTTATTACAATTGCTCTGTAGTACAGCTTTAGG  600

seq1  TCGGGCATGGTGATTCCACCAGAGGTTCTTTTATCCTTGAGAAGAGTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGCATGGTGATTCCACCAGAGGTTCTTTTATCCTTGAGAAGAGTTTT  650

seq1  TGCTATCCTAGGTTTTTTGTTATTCCAGATGAATCTGCCGATTGCCCTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTATCCTAGGTTTTTTGTTATTCCAGATGAATCTGCCGATTGCCCTTT  700

seq1  CTAATTCGTTGAAGAATTGAGTGGAATTTTGATGGGGATTGCACTGAATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTCGTTGAAGAATTGAGTGGAATTTTGATGGGGATTGCACTGAATC  750

seq1  TGTAGATTGCTTTTGGCAGGATAGCCATTTTTACTATATTGATCCTGCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATTGCTTTTGGCAGGATAGCCATTTTTACTATATTGATCCTGCCA  800

seq1  ATCCATGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAATTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGAGCATGGGAGATCTTTCCATCTTCTGAGATCTTCTTTAATTTC  850

seq1  TTTCTTCAGAGACATGAAGTTCTTGTCATACAGATTTTTCACCTCCCTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCAGAGACATGAAGTTCTTGTCATACAGATTTTTCACCTCCCTAG  900

seq1  TTAGAGTCACGCC  913
      |||||||||||||
seq2  TTAGAGTCACGCC  913