BAC Information

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BAC

Clone NameB6Ng01-139M24
Chromosome6 (Build37)
Map Location 75,569,406 - 75,570,518
singlet/doubletsinglet
Overlap genenone
Upstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143
Downstream geneEG668145, EG546907, LOC100042952, LOC668153, EG668155
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-139M24.bB6Ng01-139M24.g
ACCDH938700DH938701
length1,2201,113
definitionDH938700|Mus musculus domesticus DNA, BAC clone: B6Ng01-139M24, 5' end.DH938701|Mus musculus domesticus DNA, BAC clone: B6Ng01-139M24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaatgcaccaccaagttctacaaccttaccatctatgacatcga
tatgattgttaccaacaaccttctccctgaggaacacagggagtctgcga
aaagcctagagctcacacagatgagatgcaccaaactaacattgcacaac
tgaaggatcccaaatgggtctatgataccccagggaatatcctagataaa
gactaacagcctgccttctgactggtctctgtaaagctgctctttaagca
gtaaactatggaaaacccaagagcaaatataaaaacctatctcaattctt
agactaccttagaaaaggccctcttacaatatagaattctgaatcccaag
accccaggtaaaaaataagtttccattaaacctcttctttttcctaaaat
ttcccagccttatagccatatttaacattaagaaaaacaaacagacagac
aaacaaaaccccaactctgaaaggtaaaggactaacactgaacttcaggt
tggatcatgggagagatcaaaaaacccccgaacaaaagtaccaaatgctg
gctaaggctttccaggggtggcagccaatccccatgcttccatgcttccc
acagtctgaggaccatatggtctctgtttcaaatgaatttaaaaggatta
ctggaccatgatatgtcctaaccttcacaaacaatactgaccatgtccag
agtgccattaaagggatattgagctgttgactgttcctgtatcccttatg
gcacaagggaattggacccagattaccttctagctcaccacctaagttgg
gccgtggacaaccaaaggccctcttagcctgagtcaccatctctgacatg
gagtcacaggcagttgtcacagcatcagggtgactcatatccttacccct
ggacaccaaggccaccaagtcatgatggggttatgggaacccacctttcc
ttcttgatcccctctggacaggatagaagaatagtctttcaacattgcta
aaactaccattcaactgtatccttaggatatctctactaagtttttctgt
gtaccaacaggtcacatgacttcctgaagaacatagtgtaggtgggggcc
cttatttcttgtttccagcttcacgtactcagctactaagctgtttccaa
tttcctagtcaacattcaacacagtcggtacaattcagtgttacctctcg
gaacgtggtgatcaacagag
gaattccctaagcttggtggcttggttttgtgaggaggatattcaaggaa
gagaaaactcaatgtgtaactataataatgttctgctttcttctggtagt
atcttactgataaaaacatagtccatgcccaaagaaagagttaatatggg
tgtagactatagaaataccttgttgttggaagtcatgatccatttggaag
tactaactgcctctcataattgcagtttcagaataaacctcagattctaa
taaattaaattggcattagtatgccctgtgtgatggagtggtggcatggg
aaatacaggtcaggcaatgttccagaactttttaagccaaggttattggt
ttctagtaattatattctgagacccaagtaccactttaattgaccaaatc
aataactttagttgaattttgttctcctgtgtattaatgaccaaatttct
gtagaactaattgtttccttgtatccgataatgtggctatttcctgacac
caaactgctcttcacttacccactcccattgttgaacatagcaagtaaac
atatggatatctacatacttttggcttgattttgtttaaggaagctattc
aagacttttcttgaaatcatgatgtttaatatttgtatggtttctaacac
caacattaatacaggtacaaggaatggagatacgagtcaaatatttgata
tgaactaggtatgatggtccatatatgcaatactcatgctgaaaactaat
caaatgattactgcaaatttagagccatcatgatctacatagtaagggca
tactgtgtgttacatacctcagaagagaataggattggaggtagcacatt
tgtacattgtactttgtacacttgcacaattgtaccttatttgaagtatt
tcttcacatatcctaagattttgtttaaactgtagttagatatttgctgt
tgaaactgttcaatccattatttccagtgttgagttgaggctaagttaaa
gacaatggacattcacaggtgataaaaatagagaaccaagacagtgatac
ttccaggtcttttattcagaacttgggagacagagggaggtgaacttttg
tgggttaaggcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_75569406_75570518
seq2: B6Ng01-139M24.g_68_1180 (reverse)

seq1  TTGCCTTATACCCACAAAGGTCCACCTCCCTCTGTCTCCCAAGTCCTGGG  50
      |||||||| ||||||||| || |||||||||||||||||||||| || | 
seq2  TTGCCTTA-ACCCACAAAAGTTCACCTCCCTCTGTCTCCCAAGTTCT-GA  48

seq1  ATTAAAG-GCTTGCAGTATCACTGTCTGGTTTCTCTATTTTTATCA-CTG  98
      || ||||  || | ||||||||||||| | |||||||||||||||| |||
seq2  ATAAAAGACCTGGAAGTATCACTGTCTTGGTTCTCTATTTTTATCACCTG  98

seq1  TTGATGTCCATTGTCTTTACCTTAGCCTCAACTTCACCACTGGAAAT-AT  147
      |  |||||||||||||||| |||||||||||| ||| |||||||||| ||
seq2  TGAATGTCCATTGTCTTTAACTTAGCCTCAAC-TCAACACTGGAAATAAT  147

seq1  GGATTGAACAGTTTCAACAGCAAATATCTAACTACAGTTTAAACAAAATC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGAACAGTTTCAACAGCAAATATCTAACTACAGTTTAAACAAAATC  197

seq1  TTAGGATATGTGAAGAAATACTTCAAATAAGGTACAATTGTGCAAGTGTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGATATGTGAAGAAATACTTCAAATAAGGTACAATTGTGCAAGTGTA  247

seq1  CAAAGTACAATGTACAAATGTGCTACCTCCAATCCTATTCTCTTCTGAGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTACAATGTACAAATGTGCTACCTCCAATCCTATTCTCTTCTGAGG  297

seq1  TATGTAACACACAGTATGCCCTTACTATGTAGATCATGATGGCTCTAAAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAACACACAGTATGCCCTTACTATGTAGATCATGATGGCTCTAAAT  347

seq1  TTGCAGTAATCATTTGATTAGTTTTCAGCATGAGTATTGCATATATGGAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGTAATCATTTGATTAGTTTTCAGCATGAGTATTGCATATATGGAC  397

seq1  CATCATACCTAGTTCATATCAAATATTTGACTCGTATCTCCATTCCTTGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATACCTAGTTCATATCAAATATTTGACTCGTATCTCCATTCCTTGT  447

seq1  ACCTGTATTAATGTTGGTGTTAGAAACCATACAAATATTAAACATCATGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTATTAATGTTGGTGTTAGAAACCATACAAATATTAAACATCATGA  497

seq1  TTTCAAGAAAAGTCTTGAATAGCTTCCTTAAACAAAATCAAGCCAAAAGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAGAAAAGTCTTGAATAGCTTCCTTAAACAAAATCAAGCCAAAAGT  547

seq1  ATGTAGATATCCATATGTTTACTTGCTATGTTCAACAATGGGAGTGGGTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGATATCCATATGTTTACTTGCTATGTTCAACAATGGGAGTGGGTA  597

seq1  AGTGAAGAGCAGTTTGGTGTCAGGAAATAGCCACATTATCGGATACAAGG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGAGCAGTTTGGTGTCAGGAAATAGCCACATTATCGGATACAAGG  647

seq1  AAACAATTAGTTCTACAGAAATTTGGTCATTAATACACAGGAGAACAAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAATTAGTTCTACAGAAATTTGGTCATTAATACACAGGAGAACAAAA  697

seq1  TTCAACTAAAGTTATTGATTTGGTCAATTAAAGTGGTACTTGGGTCTCAG  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACTAAAGTTATTGATTTGGTCAATTAAAGTGGTACTTGGGTCTCAG  747

seq1  AATATAATTACTAGAAACCAATAACCTTGGCTTAAAAAGTTCTGGAACAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAATTACTAGAAACCAATAACCTTGGCTTAAAAAGTTCTGGAACAT  797

seq1  TGCCTGACCTGTATTTCCCATGCCACCACTCCATCACACAGGGCATACTA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGACCTGTATTTCCCATGCCACCACTCCATCACACAGGGCATACTA  847

seq1  ATGCCAATTTAATTTATTAGAATCTGAGGTTTATTCTGAAACTGCAATTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAATTTAATTTATTAGAATCTGAGGTTTATTCTGAAACTGCAATTA  897

seq1  TGAGAGGCAGTTAGTACTTCCAAATGGATCATGACTTCCAACAACAAGGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGGCAGTTAGTACTTCCAAATGGATCATGACTTCCAACAACAAGGT  947

seq1  ATTTCTATAGTCTACACCCATATTAACTCTTTCTTTGGGCATGGACTATG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTATAGTCTACACCCATATTAACTCTTTCTTTGGGCATGGACTATG  997

seq1  TTTTTATCAGTAAGATACTACCAGAAGAAAGCAGAACATTATTATAGTTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTATCAGTAAGATACTACCAGAAGAAAGCAGAACATTATTATAGTTA  1047

seq1  CACATTGAGTTTTCTCTTCCTTGAATATCCTCCTCACAAAACCAAGCCAC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTGAGTTTTCTCTTCCTTGAATATCCTCCTCACAAAACCAAGCCAC  1097

seq1  CAAGCTTAGGGAATTC  1113
      ||||||||||||||||
seq2  CAAGCTTAGGGAATTC  1113