BAC Information

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BAC

Clone NameB6Ng01-140M18
Chromosome6 (Build37)
Map Location 11,076,465 - 11,077,640
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC330264, LOC100040285, LOC667650, AA545190
Downstream geneNdufa4, Phf14, LOC100040844, EG625347, LOC435879
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140M18.bB6Ng01-140M18.g
ACCDH939427DH939428
length1,1501,120
definitionDH939427|Mus musculus domesticus DNA, BAC clone: B6Ng01-140M18, 5' end.DH939428|Mus musculus domesticus DNA, BAC clone: B6Ng01-140M18, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagagctaccctatacaccatttaaaatatgatccttaatatggt
aaaattgagaatctcccacattcaagaaagagtgggaacgacatttgaga
attttatccattaacatagacattattgtgtataaagcttttaagtattg
tttttcaaagtcacttatagtcactattttgtctaagaacactccattct
ctcactagcctctttttctagctgaatgactataatagttgcttcataga
gaaaatttttaatgatttactgtcatcttaccctgttcagaaacatttaa
tggaacacacattttcttacaacctgaatcttaacttgatatcagataat
ttgtgttccagtaaatgtttctgaagagggtaaaattgtgctaaatcact
tgaaatataatttatatgaaaagatagacctaagaaatttatgagattac
acaatgcaatctgtaacatccaggtttttattttcaaatcagagaaggaa
atgtcagaatatttttccttctaacactataaaagttttgtgaccttgaa
gctcagaataaattctagtcactgacctctaaaaatttgccctgttttca
taatcttagaaaaggtagtttgtccttccttgcctatgcaaggattttgt
tgcactattgtgtaatgactttacttttttcttgccattcagaccgcagg
taaagtgttcatgcatgagaggagaattccccagccgctgaacaagagaa
tcccatattttctacttttaggtttgtccagttgctatagtgtcactgat
aatgtgtgatctttctcttaagtctcacaatagtattatattctttatgg
tcagagagtgtgtctttttcagtccttagcatttgtagtggctattcctg
gttgtcaacttgacatatttggaatgactacaatccggattggaagctca
cagtgacccttatctggagcttgagatcttatctgatcttgtttgaagat
cttgagccaagtgctatggattccagaagattgatctctgagttaggaac
acactttaatctgggctaaccttgctggaacaatatagacatggagaaag
gaatccagctctggtcctttcccctgcttgctgcgtgaactggaactgct

gaattcctctttcttttcctcatctgcatcatgagctattacttgtttaa
ttggtcttgaccattctgactagtgttagatgaaatctcaaaatattttc
atttatatctcccttggggctaaggatatttaatgtctctttaagtgttt
ctcagtcgtttgagttttctcttttgggaattgtctctttatgtctgact
ctatttttgagtttttttttttcctcaagacttagttttttgagttcttt
atgtactatagatactagtcttcttttgcatatatagctggtaaattctt
tttcccttatataccctgctgctttgtttgaaagctgatgttctttgtta
tacaaaagtttttctatttaattggttcccatttattagttgctgatctt
agtgccaatacatttggtggtctatttaaaaataattttcttgtgccaag
aatattctccattttctcttctatcaggtccagtatttctggttttatgt
tgagatctttgatacatttagaattgagattttgcagggtgtgaatcttt
ttgtattctatatgcagacattcagtgtgaccagcaccatttgctgaaga
tgctgtctagtttccactgtgtatttatggcttcatatttaaaaaaatat
cagatgtacataggtgtgtatggactcatttatgggtctttacttctatt
aatcgaacaattattgttttctttttccattttcatattcttaaaaatac
tatattccctgtagtacaactttaaatagaatatgctggtacctccagca
tgtttgtcaatcaggagaatcttaggcactttcttttttgttgatgtttt
ttctgaacaggtttacataggaactggaaaaattttcagttctgtgaaaa
ttgtgttgggattttattagggattacattgaatcatagattgctttagt
aattggcattttactatgttatcaccaatccatgacatggggagatcttt
aatctttgatatgtattccttcttttctagttaaaggttcttggtacagg
gtttcactcattctagagtactctagatattcttaatctatgtgctatat
gggagaaggttaacccttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_11076465_11077640
seq2: B6Ng01-140M18.b_45_1194 (reverse)

seq1  AGCAGTTACTCAGTCTCACGCAGCAAGCAGGCGAAGGAGCAAGAGCTCGA  50
      |||||||   |||| |||||||||||||||| ||| |  | |||||| ||
seq2  AGCAGTT--CCAGT-TCACGCAGCAAGCAGGGGAAAGGACCAGAGCTGGA  47

seq1  CTCCCTTCTTCCAATGTCCTTATATTGTCTCCAGCAAAAGGTGTAGCCCA  100
       ||| ||||  | |||||  |||||||| ||||||  ||||| |||||||
seq2  TTCCTTTCT--CCATGTC--TATATTGT-TCCAGC--AAGGT-TAGCCCA  89

seq1  GATTAAAGGTGTGTTCCTTAACTCGGAGATTCAATCTTCTGGAATCCATA  150
      ||||||| ||||||||| |||||| |||| ||||||||||||||||||||
seq2  GATTAAA-GTGTGTTCC-TAACTCAGAGA-TCAATCTTCTGGAATCCATA  136

seq1  GCCACTATGGCTCAAGATCTTCAAACCAAGATCCAGATAAGGATCTCCAA  200
      | |||| |||||||||||||||||| |||||| ||||||| ||||| |||
seq2  G-CACT-TGGCTCAAGATCTTCAAA-CAAGAT-CAGATAA-GATCT-CAA  180

seq1  GCCTCCAGATAAGGGTCACTGGTGAGCCTTCCAATTCCGGATTGTAGTTC  250
      | |||||||||||||||||| ||||| ||||||| |||||||||||| ||
seq2  G-CTCCAGATAAGGGTCACT-GTGAG-CTTCCAA-TCCGGATTGTAG-TC  225

seq1  ATTCCAAATATTGTCAAGTTGACAACCAGGAATAGCCACTACAAATGCTA  300
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATTCCAAATA-TGTCAAGTTGACAACCAGGAATAGCCACTACAAATGCTA  274

seq1  AGGACTGAAAAAGACACACTCTCTGACCATAAAGAATATAATACTATTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGAAAAAGACACACTCTCTGACCATAAAGAATATAATACTATTGT  324

seq1  GAGACTTAAGAGAAAGATCACACATTATCAGTGACACTATAGCAACTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTTAAGAGAAAGATCACACATTATCAGTGACACTATAGCAACTGGA  374

seq1  CAAACCTAAAAGTAGAAAATATGGGATTCTCTTGTTCAGCGGCTGGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCTAAAAGTAGAAAATATGGGATTCTCTTGTTCAGCGGCTGGGGAA  424

seq1  TTCTCCTCTCATGCATGAACACTTTACCTGCGGTCTGAATGGCAAGAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTCTCATGCATGAACACTTTACCTGCGGTCTGAATGGCAAGAAAA  474

seq1  AAGTAAAGTCATTACACAATAGTGCAACAAAATCCTTGCATAGGCAAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAGTCATTACACAATAGTGCAACAAAATCCTTGCATAGGCAAGGA  524

seq1  AGGACAAACTACCTTTTCTAAGATTATGAAAACAGGGCAAATTTTTAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAAACTACCTTTTCTAAGATTATGAAAACAGGGCAAATTTTTAGAG  574

seq1  GTCAGTGACTAGAATTTATTCTGAGCTTCAAGGTCACAAAACTTTTATAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTGACTAGAATTTATTCTGAGCTTCAAGGTCACAAAACTTTTATAG  624

seq1  TGTTAGAAGGAAAAATATTCTGACATTTCCTTCTCTGATTTGAAAATAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTAGAAGGAAAAATATTCTGACATTTCCTTCTCTGATTTGAAAATAAA  674

seq1  AACCTGGATGTTACAGATTGCATTGTGTAATCTCATAAATTTCTTAGGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGGATGTTACAGATTGCATTGTGTAATCTCATAAATTTCTTAGGTC  724

seq1  TATCTTTTCATATAAATTATATTTCAAGTGATTTAGCACAATTTTACCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTTTCATATAAATTATATTTCAAGTGATTTAGCACAATTTTACCCT  774

seq1  CTTCAGAAACATTTACTGGAACACAAATTATCTGATATCAAGTTAAGATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGAAACATTTACTGGAACACAAATTATCTGATATCAAGTTAAGATT  824

seq1  CAGGTTGTAAGAAAATGTGTGTTCCATTAAATGTTTCTGAACAGGGTAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTGTAAGAAAATGTGTGTTCCATTAAATGTTTCTGAACAGGGTAAG  874

seq1  ATGACAGTAAATCATTAAAAATTTTCTCTATGAAGCAACTATTATAGTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGTAAATCATTAAAAATTTTCTCTATGAAGCAACTATTATAGTCA  924

seq1  TTCAGCTAGAAAAAGAGGCTAGTGAGAGAATGGAGTGTTCTTAGACAAAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGCTAGAAAAAGAGGCTAGTGAGAGAATGGAGTGTTCTTAGACAAAA  974

seq1  TAGTGACTATAAGTGACTTTGAAAAACAATACTTAAAAGCTTTATACACA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGACTATAAGTGACTTTGAAAAACAATACTTAAAAGCTTTATACACA  1024

seq1  ATAATGTCTATGTTAATGGATAAAATTCTCAAATGTCGTTCCCACTCTTT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGTCTATGTTAATGGATAAAATTCTCAAATGTCGTTCCCACTCTTT  1074

seq1  CTTGAATGTGGGAGATTCTCAATTTTACCATATTAAGGATCATATTTTAA  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAATGTGGGAGATTCTCAATTTTACCATATTAAGGATCATATTTTAA  1124

seq1  ATGGTGTATAGGGTAGCTCTGAATTC  1176
      ||||||||||||||||||||||||||
seq2  ATGGTGTATAGGGTAGCTCTGAATTC  1150