BAC Information

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BAC

Clone NameB6Ng01-140N15
Chromosome6 (Build37)
Map Location 23,733,724 - 23,734,832
singlet/doubletsinglet
Overlap geneCadps2
Upstream genePtprz1, Aass, EG668044, EG546894, EG668053, EG384356, Fezf1, Rnf133, Rnf148
Downstream geneTas2r118, LOC100041082, Slc13a1, LOC100041094, Iqub, Ndufa5, Asb15, EG626715, Lmod2, Wasl, 4932701A20Rik, Hyal4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140N15.bB6Ng01-140N15.g
ACCDH939468DH939469
length1,1731,089
definitionDH939468|Mus musculus domesticus DNA, BAC clone: B6Ng01-140N15, 5' end.DH939469|Mus musculus domesticus DNA, BAC clone: B6Ng01-140N15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaaacacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
acatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccagaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaagaacacatgctccactat
gttcatagcagccttgtttataacagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcggctattaaaaaaaatgaatttatgaaattcctaggcaa
atggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaa
ggaactcgcacaatatgtactcactgataagtggatattagcccagaaac
ttaggatacccaagatataagatacaacttgccaaacacatgaaattcaa
gaagaacgaagaccaacgtgtggacactttaccctttcttagaaatggga
acaaaacacccatagaaggagttacagagacaaaatttggagctgtgacg
aaaggatggaccatctagtgactgccatatgcagggatccatcccataat
cagcttccaaatgctaacaccattgcatacactagcaagatttcgctgaa
aggacccagttatagctctctcttgtgagactatgccggggcctagcaac
acagaagtggatgatcacagtcagctaatggatgggtcacagggtctcct
aatggaggagctaagagaaataatccaaggagctatagggaactgcaact
ctataggtagaacaacaatatgactatcagttcctgggagctcttgtcta
gctgcatatgtatccaagatggcctagtcggcatctctgcaaagagaggc
catggacttgcaccttaaatgtcctcagatcaggaactcatggtctaaag
ggggagttgggggtaggagaatt
gaattctttgtttagctctgtacccttgaatcttcgaaaattgaagattc
aaatcatttctaatatgatccagtttttccatcagcactggaatagagaa
tacatgaccatgacttataaactatttctttgttacacaggaatatatga
aacaatatatcaattttgtttatgtttcacccctgacaatgagaaagaat
gcatcattcaaccatcctttcaaattcctacccttacttatccatacata
ttttaaaaatcaactgtttaagtatatcgtataatggaaaaataagagag
atgaatgccaaaatgagcctgccatagagtcagaaacctttcttttatgt
catgttacataaaaaaaaaaaatggcatgacataaatttcgtaggaaaat
cttacaatgtagttctacagtcctgtagtctcacttctcacccagtcaac
tttaagtcatcagtttctattattttataaactcaatgcacttaaaaatc
actgtaaaagttaacagagttttaagttaactatgaaccccccccaaata
aaggagaaacctgtccatttttaaagttgtctttcaaagttctcacattt
gcaatattgctctataaggccccaaaatagctttttatatcaaaaggtaa
caatcaaaaaacacacattcacttaggacaaattatagttcacttaagcc
acacttactcaaaagacacatgacagtcatgtttccaaatactgtaatga
tgtaataagaggggaaaggaaaatccaagcagtggtggtgcacaccatta
atccccaaatttgggaggcagaggcaggcagatctctgagttcaaggcca
gcacggtctacagagtgagttcaggacagtcagggctacacagagaaacc
ctgtctcgactctgccctcatctactaacttaacaaagagacagcagtga
tatatcatagctatgtctgatatcatcagatcacttcactatcagtgatg
gggcacatcatccctcagatgagaatgtatattaccaatgtgtttctagc
acgctactgtgatgacttagcaagcagaacacccttgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_23733724_23734832
seq2: B6Ng01-140N15.g_68_1156

seq1  GAATTCTTTGTTTAGCTCTGTACCCTTGAATCTTCGAAAATTGAAGATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTTTAGCTCTGTACCCTTGAATCTTCGAAAATTGAAGATTC  50

seq1  AAATCATTTCTAATATGATCCAGTTTTTCCATCAGCACTGGAATAGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCATTTCTAATATGATCCAGTTTTTCCATCAGCACTGGAATAGAGAA  100

seq1  TACATGACCATGACTTATAAACTATTTCTTTGTTACACAGGAATATATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGACCATGACTTATAAACTATTTCTTTGTTACACAGGAATATATGA  150

seq1  AACAATATATCAATTTTGTTTATGTTTCACCCCTGACAATGAGAAAGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATATATCAATTTTGTTTATGTTTCACCCCTGACAATGAGAAAGAAT  200

seq1  GCATCATTCAACCATCCTTTCAAATTCCTACCCTTACTTATCCATACATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCATTCAACCATCCTTTCAAATTCCTACCCTTACTTATCCATACATA  250

seq1  TTTTAAAAATCAACTGTTTAAGTATATCGTATAATGGAAAAATAAGAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAAAATCAACTGTTTAAGTATATCGTATAATGGAAAAATAAGAGAG  300

seq1  ATGAATGCCAAAATGAGCCTGCCATAGAGTCAGAAACCTTTCTTTTATGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGCCAAAATGAGCCTGCCATAGAGTCAGAAACCTTTCTTTTATGT  350

seq1  CATGTTACATAAAAAAAAAAAATGGCATGACATAAATTTCGTAGGAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTACATAAAAAAAAAAAATGGCATGACATAAATTTCGTAGGAAAAT  400

seq1  CTTACAATGTAGTTCTACAGTCCTGTAGTCTCACTTCTCACCCAGTCAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACAATGTAGTTCTACAGTCCTGTAGTCTCACTTCTCACCCAGTCAAC  450

seq1  TTTAAGTCATCAGTTTCTATTATTTTATAAACTCAATGCACTTAAAAATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTCATCAGTTTCTATTATTTTATAAACTCAATGCACTTAAAAATC  500

seq1  ACTGTAAAAGTTAACAGAGTTTTAAGTTAACTATGAACCCCCCCCAAATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAAAAGTTAACAGAGTTTTAAGTTAACTATGAACCCCCCCCAAATA  550

seq1  AAGGAGAAACCTGTCCATTTTTAAAGTTGTCTTTCAAAGTTCTCACATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGAAACCTGTCCATTTTTAAAGTTGTCTTTCAAAGTTCTCACATTT  600

seq1  GCAATATTGCTCTATAAGGCCCCAAAATAGCTTTTTATATCAAAAGGTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATATTGCTCTATAAGGCCCCAAAATAGCTTTTTATATCAAAAGGTAA  650

seq1  CAATCAAAAAACACACATTCACTTAGGACAAATTATAGTTCACTTAAGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCAAAAAACACACATTCACTTAGGACAAATTATAGTTCACTTAAGCC  700

seq1  ACACTTACTCAAAAGACACATGACAGTCATGTTTCCAAATACTGTAATGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTACTCAAAAGACACATGACAGTCATGTTTCCAAATACTGTAATGA  750

seq1  TGTAATAAGAGGGG-AAGGAAAATCCAAGCAGTGGTGGTGCACACCATTA  799
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TGTAATAAGAGGGGAAAGGAAAATCCAAGCAGTGGTGGTGCACACCATTA  800

seq1  ATCCCCAAATTTGGGAGGCAGAGGCAGGCAGATCTCTGAGTTCAAGGCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCAAATTTGGGAGGCAGAGGCAGGCAGATCTCTGAGTTCAAGGCCA  850

seq1  GCACGGTCTACAGAGTGAGTTCCAGGACAGTCAGGGCTACACAGAGAAAC  899
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  GCACGGTCTACAGAGTGAGTT-CAGGACAGTCAGGGCTACACAGAGAAAC  899

seq1  CCTGTCTCGACTCTGCCCCCACCCAC-CACCTAACAAAGAGACAAGGCAG  948
      |||||||||||||||||| || | ||  || |||||||||||||  ||||
seq2  CCTGTCTCGACTCTGCCCTCATCTACTAACTTAACAAAGAGACA--GCAG  947

seq1  TGATATATTCATAGCTATGTCTTGATTATCATTCAAGATCACTTCACTAT  998
      ||||||| ||||||||||||| ||| ||||||   |||||||||||||||
seq2  TGATATA-TCATAGCTATGTC-TGA-TATCAT--CAGATCACTTCACTAT  992

seq1  CAGTGATGGGGGCACCATCATCCCCTCAAGATGAGAAATGTATATTACAC  1048
      ||||||| |||||| |||||| ||||| ||||||| ||||||||||  ||
seq2  CAGTGAT-GGGGCA-CATCAT-CCCTC-AGATGAG-AATGTATATT--AC  1035

seq1  AAATGTGTTTCTTAGCACGCTCACTGTGATGGACCTAGCAAAGGGCAGAA  1098
       |||||||||| ||||||||| |||||||| ||| ||||||   ||||||
seq2  CAATGTGTTTC-TAGCACGCT-ACTGTGAT-GACTTAGCAA---GCAGAA  1079

seq1  CCACCCCTGAA  1109
       ||||| ||||
seq2  -CACCCTTGAA  1089