BAC Information

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BAC

Clone NameB6Ng01-140O14
Chromosome6 (Build37)
Map Location 128,710,275 - 128,870,801
singlet/doubletdoublet
Overlap geneKlrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i
Upstream genePrmt8, Tspan11, Tspan9, LOC100043853, LOC667560, Tead4, LOC652986, Tulp3, 5930416I19Rik, Foxm1, Nrip2, Itfg2, Fkbp4, EG667598, Pzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861
Downstream geneClec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a, 4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a, Olr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140O14.bB6Ng01-140O14.g
ACCDH939514DH939515
length1,2371,078
definitionDH939514|Mus musculus domesticus DNA, BAC clone: B6Ng01-140O14, 5' end.DH939515|Mus musculus domesticus DNA, BAC clone: B6Ng01-140O14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(128,869,533 - 128,870,801)(128,710,275 - 128,711,357)
sequence
gaattccactgattgatggaagttattggggcccctatactatacctttc
cagtgaattggtgaagctcagtctatcccactgatgcagacatagtggag
catgactgtgatccaaacccttgagaagcagtggaaggtggagctccaag
gtccaatccagcctggtctacaaagcacattcaagggaagtcatggctgc
acagagaaattttgtctcaaaaaagaaaaagaaacaaagaatacaaacaa
ataaaagctcccactgaaatgtttcccatccaagctggagctcttggttt
ctgatgatgagagtttagaggaggttcccaggaaccctgcagcctgtgca
tttgaacaggtgcagttgggcaaagagtggactgatgagcagtggtttgc
ggggcagttagggccccaagtgcccaaatgcagttctgtctacttgctac
atagcttgcttaaagcaaggaaacattttaattggtaaaggagtggacac
gagctagcccagaggccaccacaacactaaggatttaagtcaaattccag
caaggatagggtttctacaattgcagctagtaaatggaaaggcagaaaag
gcaattagatatgaggggatttagagcttgcagagggaagggggttagat
ctgacaggactctgtttgcttcggccatacgtccagaacaagggtttatt
tttcctcctttccagtacacttgccttcactcagctttttcctgtctcat
agccacaattgtcaatcatcacaacacaggaacacaggagaaggaaaagc
agtctgaaaacatgcaagctgttatattcagtgttgtctgtaaatcctcc
aagggtgttctgatgactcttctgtgcaggctgattcagtgggtcagaag
cctcagtatatctcttcaggaagtcttgtcatcaatcacagaaagtaaat
gtgtgtgtctacagtacagatgctttgaagttttttcttgtcttaaggcc
ttctctagggatggcaggaagaggtgtaactggaggagctagcttctgga
gccgagggcactcaattctcaggggattcatttgattctttaacacttac
ggtatcggattaaagtgacaaattcttcttgagtggagactccagtagcc
tggctctacaattacggcagtggggctcatggtaatgctactagcatgaa
tactacgtaatcaaacgcaaaatagcctttaaaaaat
gaattcctctcaaaaccaaatacaaacaaaaccgaactcttggcggcgac
catttctcgccggccgactactgatcgctgcttcgcccgtgtaacactag
caaaatggaacagaagggtcgggagaactgaggacatggattggaagaag
ggggtcgtgtcaggacggaagcgtggcgtggggagaagacaggagggtcg
ggcgtgtgcagctctgcgtggacaagagcgtgtgagctgcactggtgcct
atgcgcccgaaggacgcgaaggatgcgatctgggtgcgtgggcgtgaggg
tctgtgaggaaactgggtctcggaatggtgtcagttctagagatgtgttt
gggggtggcgtgtggccgtgaatttgtcttcgtgttgaacttagaaaaaa
aaaaaaaaaaaaaggtgaatgttttccaggagaaaattaggaattaaaga
aaaaaaatgtgtagaccaggctgtcctcgaactccagatcctcctgcctc
tgcctccttcagcaaatcctaccggcctgcgccaccagaaccggcgagcg
ttgctgctgctccgattctacttagctatgtattctatgacatcaccgct
tttctccaacgaggagactatagggtacaacgcccagcaggccttcgccc
caaaccgcaccgtcaacctggctcatgaggttctccgccagtctcacgca
cacttcccgcctaacgtcagccactcctcactctagggaaccgcaacctc
atgagccccgaagtcctcttttcgtctcgcgctctctgccggtcatccag
caaacacactcccgcacctttcaggcgtgcaatcctctgaattctctgta
ttcttccttggctttgcgctctcttgcaatgcccagggtctttttctagg
taagcagacacatggtccaggtaaagagactgcagaattagatctctagt
gtgctgtggagggcagggagtgtgataaaggctcaagatgtttgctgggg
accttgggtgctccaaagtttatcatcatatcttccattggtcctcatct
tcctcccagaccggatagccatctgctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_128869533_128870801
seq2: B6Ng01-140O14.b_50_1286 (reverse)

seq1  ATTTTTTAAAGGCTCTTATTCGTGTTTTTAGTTATTTACCCTTTAGTATT  50
      |||||||||||||| || | |||        ||  ||||      ||| |
seq2  ATTTTTTAAAGGCTATTTTGCGT--------TTGATTAC------GTAGT  36

seq1  ATTTCCCATGCTTGGGTTGATA-CATTGTATACAAATGAGCACCACTGAC  99
      |||   |||||| |      || |||    |||  |||||| |||||| |
seq2  ATT---CATGCTAG------TAGCAT----TAC-CATGAGCCCCACTG-C  71

seq1  AGTATACTAGAGAGACAGGCATAAACTGGGAGTCTTCCACTCACAGAGGA  149
       ||| | |  |||| |||||    ||| |||||| |||||||| ||| ||
seq2  CGTA-ATTGTAGAGCCAGGC---TACT-GGAGTC-TCCACTCA-AGAAGA  114

seq1  TTTTGTCACTTAAATACTGATACTGT-AGTGTTATAGACATCAAATGAAT  198
       |||||||||| ||| | ||||| || ||||||| ||| |||||||||||
seq2  ATTTGTCACTTTAAT-CCGATACCGTAAGTGTTAAAGA-ATCAAATGAAT  162

seq1  CCACTGAGAATTGAGTGCCCCTCTGGCTCCAGAGCCTATGCTCCT-CAGT  247
      || |||||||||||||| ||||| |||||||||  ||| |||||| ||||
seq2  CCCCTGAGAATTGAGTG-CCCTC-GGCTCCAGAAGCTA-GCTCCTCCAGT  209

seq1  TACA-CTC-TCCTGCCATCCCTAGAGAAGGCCTTAGGGCA--GAGAGACT  293
      |||| ||| |||||||||||||||||||||||||| | ||   | | |||
seq2  TACACCTCTTCCTGCCATCCCTAGAGAAGGCCTTAAGACAAGAAAAAACT  259

seq1  TCAAGGGCATCTGTAACTGGTAGACACACACATTTACTTTCTGTGTTTGA  343
      ||||  |||||||| ||| |||||||||||||||||||||||||| ||||
seq2  TCAA-AGCATCTGT-ACT-GTAGACACACACATTTACTTTCTGTGATTGA  306

seq1  TGACAGGCTTTCCTGAAGAGATATACTGGGGCTTCTGA-CCACTGGATCA  392
      ||||| |  ||||||||||||||||||| ||||||||| |||||| ||||
seq2  TGACAAGACTTCCTGAAGAGATATACTGAGGCTTCTGACCCACTGAATCA  356

seq1  GCCTGCACAG-AGAGTCATCAGAACACCCTTGGAGG-TTTACAGACAACA  440
      |||||||||| ||||||||||||||||||||||||| |||||||||||||
seq2  GCCTGCACAGAAGAGTCATCAGAACACCCTTGGAGGATTTACAGACAACA  406

seq1  CTGAATATAACAGCTTGCATG-TTTCAGACTGCTTTTCCTTCTCCTGTGT  489
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTGAATATAACAGCTTGCATGTTTTCAGACTGCTTTTCCTTCTCCTGTGT  456

seq1  TCCTGTGTTGTGATGATTGACAATTGTGGCTATGAGACAGG-AAAGGCTG  538
      ||||||||||||||||||||||||||||||||||||||||| ||| ||||
seq2  TCCTGTGTTGTGATGATTGACAATTGTGGCTATGAGACAGGAAAAAGCTG  506

seq1  AGTGAAGGCAAGTGTACTGGAAAGGAGGAAAAATAAACCCTTGTTCTGGA  588
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAAGGCAAGTGTACTGGAAAGGAGGAAAAATAAACCCTTGTTCTGGA  556

seq1  CGTATGGCCGAAGCAAACAGAGTCCTGTCAGATCTAACCCCCTTCCCTCT  638
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTATGGCCGAAGCAAACAGAGTCCTGTCAGATCTAACCCCCTTCCCTCT  606

seq1  GCAAGCTCTAAATCCCCTCATATCTAATTGCCTTTTCTGCCTTTCCATTT  688
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCTCTAAATCCCCTCATATCTAATTGCCTTTTCTGCCTTTCCATTT  656

seq1  ACTAGCTGCAATTGTAGAAACCCTATCCTTGCTGGGATTTGACTTAAATC  738
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACTAGCTGCAATTGTAGAAACCCTATCCTTGCTGGAATTTGACTTAAATC  706

seq1  CTTAGTGTTGTGGTGGCCTCTGGGCTAGCTCGTGTCCACTCCTTTACCAA  788
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTGTTGTGGTGGCCTCTGGGCTAGCTCGTGTCCACTCCTTTACCAA  756

seq1  TTAAAATGTTTCCTTGCTTTAAGCAAGCTATGTAGCAAGTAGACAGAACT  838
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATGTTTCCTTGCTTTAAGCAAGCTATGTAGCAAGTAGACAGAACT  806

seq1  GCATTTGGGCACTTGGGGCCCTAACTGCCCCGCAAACCACTGCTCATCAG  888
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTTGGGCACTTGGGGCCCTAACTGCCCCGCAAACCACTGCTCATCAG  856

seq1  TCCACTCTTTGCCCAACTGCACCTGTTCAAATGCACAGGCTGCAGGGTTC  938
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTCTTTGCCCAACTGCACCTGTTCAAATGCACAGGCTGCAGGGTTC  906

seq1  CTGGGAACCTCCTCTAAACTCTCATCATCAGAAACCAAGAGCTCCAGCTT  988
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAACCTCCTCTAAACTCTCATCATCAGAAACCAAGAGCTCCAGCTT  956

seq1  GGATGGGAAACATTTCAGTGGGAGCTTTTATTTGTTTGTATTCTTTGTTT  1038
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGGAAACATTTCAGTGGGAGCTTTTATTTGTTTGTATTCTTTGTTT  1006

seq1  CTTTTTCTTTTTTGAGACAAAATTTCTCTGTGCAGCCATGACTTCCCTTG  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTCTTTTTTGAGACAAAATTTCTCTGTGCAGCCATGACTTCCCTTG  1056

seq1  AATGTGCTTTGTAGACCAGGCTGGATTGGACCTTGGAGCTCCACCTTCCA  1138
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGCTTTGTAGACCAGGCTGGATTGGACCTTGGAGCTCCACCTTCCA  1106

seq1  CTGCTTCTCAAGGGTTTGGATCACAGTCATGCTCCACTATGTCTGCATCA  1188
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTCAAGGGTTTGGATCACAGTCATGCTCCACTATGTCTGCATCA  1156

seq1  GTGGGATAGACTGAGCTTCACCAATTCACTGGAAAGGTATAGTATAGGGG  1238
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGGATAGACTGAGCTTCACCAATTCACTGGAAAGGTATAGTATAGGGG  1206

seq1  CCCCAATAACTTCCATCAATCAGTGGAATTC  1269
      |||||||||||||||||||||||||||||||
seq2  CCCCAATAACTTCCATCAATCAGTGGAATTC  1237

seq1: chr6_128710275_128711357
seq2: B6Ng01-140O14.g_68_1145

seq1  GAATTCCTCTCAAAACCAAATACAAACAAAACCGAACTCTTGGCGGCGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTCAAAACCAAATACAAACAAAACCGAACTCTTGGCGGCGAC  50

seq1  CATTTCTCGCCGGCCGACTACTGATCGCTGCTTCGCCCGTGTAACACTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTCGCCGGCCGACTACTGATCGCTGCTTCGCCCGTGTAACACTAG  100

seq1  CAAAATGGAACAGAAGGGTCGGGAGAACTGAGGACATGGATTGGAAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGGAACAGAAGGGTCGGGAGAACTGAGGACATGGATTGGAAGAAG  150

seq1  GGGGTCGTGTCAGGACGGAAGCGTGGCGTGGGGAGAAGACAGGAGGGTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGTCGTGTCAGGACGGAAGCGTGGCGTGGGGAGAAGACAGGAGGGTCG  200

seq1  GGCGTGTGCAGCTCTGCGTGGACAAGAGCGTGTGAGCTGCACTGGTGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTGTGCAGCTCTGCGTGGACAAGAGCGTGTGAGCTGCACTGGTGCCT  250

seq1  ATGCGCCCGAAGGACGCGAAGGATGCGATCTGGGTGCGTGGGCGTGAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGCCCGAAGGACGCGAAGGATGCGATCTGGGTGCGTGGGCGTGAGGG  300

seq1  TCTGTGAGGAAACTGGGTCTCGGAATGGTGTCAGTTCTAGAGATGTGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGAGGAAACTGGGTCTCGGAATGGTGTCAGTTCTAGAGATGTGTTT  350

seq1  GGGGGTGGCGTGTGGCCGTGAATTTGTCTTCGTGTTGAACTTAGAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGGCGTGTGGCCGTGAATTTGTCTTCGTGTTGAACTTAGAAAAAA  400

seq1  AAAAAAAAAAAAAGGTGAATGTTTTCCAGGAGAAAATTAGGAATTAAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAAAGGTGAATGTTTTCCAGGAGAAAATTAGGAATTAAAGA  450

seq1  AAAAAAATGTGTAGACCAGGCTGTCCTCGAACTCCAGATCCTCCTGCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATGTGTAGACCAGGCTGTCCTCGAACTCCAGATCCTCCTGCCTC  500

seq1  TGCCTCCTTCAGCAAATCCTACCGGCCTGCGCCACCAGAACCGGCGAGCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCTTCAGCAAATCCTACCGGCCTGCGCCACCAGAACCGGCGAGCG  550

seq1  TTGCTGCTGCTCCGATTCTACTTAGCTATGTATTCTATGACATCACCGC-  599
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  TTGCTGCTGCTCCGATTCTACTTAGCTATGTATTCTATGACATCACCGCT  600

seq1  TTTCTCCAACGAGGAGACTATAGGGTACAACGCCCAGCAGGCCTTCGCCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCCAACGAGGAGACTATAGGGTACAACGCCCAGCAGGCCTTCGCCC  650

seq1  CAAACCGCACCGTCAACCTGGCTCATGAGGTTCTCCGCCAGTCTCACGCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACCGCACCGTCAACCTGGCTCATGAGGTTCTCCGCCAGTCTCACGCA  700

seq1  CACTTCCCGCCTAACGTCAGCCACTCCTCACTCTAGGGAACCGCAACCTC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCCGCCTAACGTCAGCCACTCCTCACTCTAGGGAACCGCAACCTC  750

seq1  ATGAGCCCCGAAG-CCTCTTTTCGCCCCGCGCCCCCTGCCGGTCACCCCA  798
      ||||||||||||| |||||||||| | ||||| | ||||||||||  |||
seq2  ATGAGCCCCGAAGTCCTCTTTTCGTCTCGCGCTCTCTGCCGGTCA-TCCA  799

seq1  GCAAACACACTCCCGCACC-TTCAGGCGTGCATTCCTCTGAATTCTCTGT  847
      ||||||||||||||||||| |||||||||||| |||||||||||||||||
seq2  GCAAACACACTCCCGCACCTTTCAGGCGTGCAATCCTCTGAATTCTCTGT  849

seq1  ATTCCTCCTTGGC-TTGCGCTCTCTTGCAGTGCCCAGGG-CTTTTTCTAG  895
      |||| |||||||| ||||||||||||||| ||||||||| ||||||||||
seq2  ATTCTTCCTTGGCTTTGCGCTCTCTTGCAATGCCCAGGGTCTTTTTCTAG  899

seq1  GTAAGCAGACACAATGGTCCAGGTAAAGAGACTGCAGAATTAGATCTCTA  945
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTAAGCAGACAC-ATGGTCCAGGTAAAGAGACTGCAGAATTAGATCTCTA  948

seq1  GTGTGCTGGTGAGGGCAGGGGAGTGTGATAAGGTCTCAGGGTGTCTGCTG  995
      ||||||||  ||||||| ||||||||||||| | |||| | ||| |||||
seq2  GTGTGCTGTGGAGGGCA-GGGAGTGTGATAAAGGCTCAAGATGTTTGCTG  997

seq1  GTGACCCTGTGTGCTCCGATGTTTCTTTCATTCATTTCCTTCCATTTGTC  1045
      | |||| || ||||||| | |||  | ||| |||| | |||||||| |||
seq2  GGGACCTTGGGTGCTCCAAAGTT--TATCA-TCATAT-CTTCCATTGGTC  1043

seq1  CTCATCTTTCTTCCACAGTCCGGAAGAGCCATCTGCTT  1083
      |||||||| ||  | ||| |||| | ||||||||||||
seq2  CTCATCTTCCT--CCCAGACCGG-ATAGCCATCTGCTT  1078