BAC Information

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BAC

Clone NameB6Ng01-141A14
Chromosome1 (Build37)6 (Build37)
Map Location 64,421,132 - 64,422,13334,073,227 - 34,073,293
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100042638, Adam23, Gm215, Mdh1b, Fastkd2, 4933402D24Rik, LOC671842, OTTMUSG00000013918, Klf7, Ppia-ps1_583.1
Downstream geneLOC100043124, Creb1, 2310038H17Rik, Ccnyl1, Fzd5, 9430067K14Rik, LOC667245, LOC100043141, 4921521F21Rik, LOC667276, Cryge, Crygd, Crygc, Crygb, LOC654356, Cryga, D630023F18Rik, Idh1, Pip5k3, Pthr2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141A14.bB6Ng01-141A14.g
ACCDH939606DH939607
length999436
definitionDH939606|Mus musculus domesticus DNA, BAC clone: B6Ng01-141A14, 5' end.DH939607|Mus musculus domesticus DNA, BAC clone: B6Ng01-141A14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(64,421,132 - 64,422,133)(34,073,227 - 34,073,293)
sequence
gaattcttggttggattcaaagtccttgggccatccttgcttgattggct
ttacgatacctccgattaaggcaaattgcctccaaaaagagttgggagct
tagtcagggtttctattcctgcacaaacatcatgaccaagaagcaagtta
gggtggaaagggtttattcagcttacacttccatgctgctgttcatcacc
agggaagtcaggactggaactcaagcagggcagggagcaggagctgatgc
agaggccatggagggatgttctttactggcttgcttcccctggcttactc
agcctgctctcttatagaaccaagactaccagcccagagatggcaccacc
cacaaggggcctttccccctttatcactaattgagaaaataccccacagc
tggatctcatggagacatttcctcaactgaagctcctttctctgtgataa
ctccagctgtgtcaagttgacacaaaactagccagtacaggagcacagac
ccacagagtgggctaatgctgagaggccagtttccacaggcgaggaggac
accgtgagctgttgtcacatagtttctagagtcacccagagctccacttc
ctggtggcgagaggtcacagttctgaaagatgtgctgcttgttgactcgt
tccgtgcatttccggtgtggatcttgtgcctttcattcaagttactgact
cagcttaaccctgcttagcttgcaagacctttcagggaagtcagagcacg
agatgcagtcactgcaagttgtcacacatgattaagtagccagagggagt
gatttatgtggaaagattaaaatccctaaatatgtatggccatgtgctac
tctgattgagtggggctttgggtatttggaaactgccctgtgggaagtct
gcagatttccacagggtgggtgggtgggaagtatactttcaagggttgac
aggcccgtgggtggcacgaatgtgactatatgaaataaggggctgcttc
agtgatgagatctgaaggctgtactaatctgtgggtatagacatgcaaaa
tcagatgaaaatttgatattacatccatttagcaaacaaccatagaagat
ttacccctgggatctatggacagatgtattgtacaagtgtgcttctcctc
ctcctgcagaagagtctttaaatccaatcagaaagaagttggttacccct
attatagtcatgccactactgtatccatgtgcatctattcccatgagggc
caaagcaactcttaaaaaagaatttaattgggagcttactcacagtttca
aaggtggtgcacattgtcatcatgacaatgaacttagagctggagcagta
gctactcctgctcccctacagagagagagagaaagagagagagagagaga
gagagagagagagagagagagagagagagagagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_64421132_64422133
seq2: B6Ng01-141A14.b_46_1044 (reverse)

seq1  GAAGCAGCACCCTATTTTCATATAGTCACATTTCTGCCACCCACGTGGCC  50
      |||||||| ||||  |||||||||||||||||  ||||||||||| ||||
seq2  GAAGCAGC-CCCTTATTTCATATAGTCACATTCGTGCCACCCACG-GGCC  48

seq1  TGTCAACCCTTGAAAGTAATACTTCCCACCCACCCACCCTGTGGAAATCT  100
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGTCAACCCTTGAAAGT-ATACTTCCCACCCACCCACCCTGTGGAAATCT  97

seq1  GCAGACTTCCCACAGGGCAGTTTCCAAATACCCAAAGCCCCACTCAATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACTTCCCACAGGGCAGTTTCCAAATACCCAAAGCCCCACTCAATCA  147

seq1  GAGTAGCACATGGCCATACATATTTAGGGATTTTAATCTTTCCACATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGCACATGGCCATACATATTTAGGGATTTTAATCTTTCCACATAAA  197

seq1  TCACTCCCTCTGGCTACTTAATCATGTGTGACAACTTGCAGTGACTGCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCCCTCTGGCTACTTAATCATGTGTGACAACTTGCAGTGACTGCAT  247

seq1  CTCGTGCTCTGACTTCCCTGAAAGGTCTTGCAAGCTAAGCAGGGTTAAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGTGCTCTGACTTCCCTGAAAGGTCTTGCAAGCTAAGCAGGGTTAAGC  297

seq1  TGAGTCAGTAACTTGAATGAAAGGCACAAGATCCACACCGGAAATGCACG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTCAGTAACTTGAATGAAAGGCACAAGATCCACACCGGAAATGCACG  347

seq1  GAACGAGTCAACAAGCAGCACATCTTTCAGAACTGTGACCTCTCGCCACC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACGAGTCAACAAGCAGCACATCTTTCAGAACTGTGACCTCTCGCCACC  397

seq1  AGGAAGTGGAGCTCTGGGTGACTCTAGAAACTATGTGACAACAGCTCACG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGTGGAGCTCTGGGTGACTCTAGAAACTATGTGACAACAGCTCACG  447

seq1  GTGTCCTCCTCGCCTGTGGAAACTGGCCTCTCAGCATTAGCCCACTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCTCCTCGCCTGTGGAAACTGGCCTCTCAGCATTAGCCCACTCTGT  497

seq1  GGGTCTGTGCTCCTGTACTGGCTAGTTTTGTGTCAACTTGACACAGCTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTGTGCTCCTGTACTGGCTAGTTTTGTGTCAACTTGACACAGCTGG  547

seq1  AGTTATCACAGAGAAAGGAGCTTCAGTTGAGGAAATGTCTCCATGAGATC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATCACAGAGAAAGGAGCTTCAGTTGAGGAAATGTCTCCATGAGATC  597

seq1  CAGCTGTGGGGTATTTTCTCAATTAGTGATAAAGGGGGAAAGGCCCCTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGTGGGGTATTTTCTCAATTAGTGATAAAGGGGGAAAGGCCCCTTG  647

seq1  TGGGTGGTGCCATCTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGTGCCATCTCTGGGCTGGTAGTCTTGGTTCTATAAGAGAGCAGG  697

seq1  CTGAGTAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTAAGCCAGGGGAAGCAAGCCAGTAAAGAACATCCCTCCATGGCCT  747

seq1  CTGCATCAGCTCCTGCTCCCTGCCCTGCTTGAGTTCCAGTCCTGACTTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATCAGCTCCTGCTCCCTGCCCTGCTTGAGTTCCAGTCCTGACTTCC  797

seq1  CTGGTGATGAACAGCAGCATGGAAGTGTAAGCTGAATAAACCCTTTCCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGATGAACAGCAGCATGGAAGTGTAAGCTGAATAAACCCTTTCCAC  847

seq1  CCTAACTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGAC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAACTTGCTTCTTGGTCATGATGTTTGTGCAGGAATAGAAACCCTGAC  897

seq1  TAAGCTCCCAACTCTTTTTGGAGGCAATTTGCCTTAATCGGAGGTATCGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCTCCCAACTCTTTTTGGAGGCAATTTGCCTTAATCGGAGGTATCGT  947

seq1  AAAGCCAATCAAGCAAGGATGGCCCAAGGACTTTGAATCCAACCAAGAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAATCAAGCAAGGATGGCCCAAGGACTTTGAATCCAACCAAGAAT  997

seq1  TC  1002
      ||
seq2  TC  999

seq1: chr6_34073227_34073293
seq2: B6Ng01-141A14.g_442_508 (reverse)

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  50

seq1  TCTTTCTCTCTCTCTCT  67
      |||||||||||||||||
seq2  TCTTTCTCTCTCTCTCT  67