BAC Information

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BAC

Clone NameB6Ng01-141G09
Chromosome6 (Build37)
Map Location 75,016,668 - 75,127,991
singlet/doubletdoublet
Overlap genenone
Upstream genenone
Downstream geneEG668132, LOC668136, LOC621306, LOC100042942, LOC668143, EG668145, EG546907
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141G09.bB6Ng01-141G09.g
ACCDH939867DH939868
length473703
definitionDH939867|Mus musculus domesticus DNA, BAC clone: B6Ng01-141G09, 5' end.DH939868|Mus musculus domesticus DNA, BAC clone: B6Ng01-141G09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(75,127,516 - 75,127,991)(75,016,668 - 75,017,370)
sequence
aacatgtctttaatataattactggataagtcaataaacagttacctaat
tgccttgaggcaggtattttgactgtatttgggaatactacaatctaagt
tgaaaattgctgacgcctttttccttttatttcaattattgagaagtaac
ttcaaaaaacaataaataattcctaaaaaagagtataatttcagtttatc
tgattatttgcctcatataaatcatttctgtatctcattttgctttatat
ttatttttatttacatttattttctctctcctcttccacacatcctacaa
ctcttttgtgtgtatatgtgtgtgtatctctctctctctctctctctctc
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgcttgtctaattt
ttttttgggtatagcgagtatttaaatgtcagggcaacattactggagcc
ggctcttcctcccatcatgtgca
gaattccaagcagctagagctatatagcttttggctatcccaaaagctgt
ggaatatgttgttctacctgagctgccttgtctggccacattgggagata
tgcctagccatcaagtgccaggaaaggggaagggtagagagggatacagg
aaggactgtagaggggtggcctgaagggtgacagtaagcaggatgtgaag
taagttaaaattaaagaataaataaataacaagacataaaaatgtacata
ttaagacattttgatactgtgtaaaacaaggacttgtgctccattcctta
gaatccacataacagctcacaagtgtcaataactccagtctcagggaatc
agatactaatctgtcctctgcacactgcactgagaagatgcacagacaac
taaggaaaatacccatgcacataaaataaaaataaataagaaattttaac
agaaattgaaagatcctgaaaaacttatctattagacacatgtggcaggg
atttacaagggtgggactgggaaaagaggatagaaaggtgctgtgattgg
aatataaagtgaattttagaatgacaaattaattaaaatgtatgtggtat
tacatgtatgtgcatataatcattgtatattctttttagatatttatgtt
cattttaaatgtgagtctctctctctctctctctctctctctctctctct
ctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_75127516_75127991
seq2: B6Ng01-141G09.b_50_528 (reverse)

seq1  TACACATGATGGGGGGAAGAGCCGGCTCCAG-AATGTTGCCCTGACATCT  49
      | ||||||||||| ||||||||||||||||| |||||||||||||||| |
seq2  TGCACATGATGGGAGGAAGAGCCGGCTCCAGTAATGTTGCCCTGACATTT  50

seq1  AAATACTCACTATAAC--ATAAATTATTATACAAACAAACACACACACAC  97
      |||||||| ||||| |  | |||  |||| |||| |||||||||||||||
seq2  AAATACTCGCTATACCCAAAAAAAAATTAGACAAGCAAACACACACACAC  100

seq1  ACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGATAC  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACAGAGAGAGAGAGAGAGAGAGAGAGATAC  150

seq1  ACACACATATACACACAAAAGAGTTGTAGGATGTGTGGAAGAGGAGAGAG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACATATACACACAAAAGAGTTGTAGGATGTGTGGAAGAGGAGAGAG  200

seq1  AAAATAAATGTAAATAAAAATAAATATAAAGCAAAATGAGATACAGAAAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAATGTAAATAAAAATAAATATAAAGCAAAATGAGATACAGAAAT  250

seq1  GATTTATATGAGGCAAATAATCAGATAAACTGAAATTATACTCTTTTTTA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTATATGAGGCAAATAATCAGATAAACTGAAATTATACTCTTTTTTA  300

seq1  GGAATTATTTATTGTTTTTTGAAGTTACTTCTCAATAATTGAAATAAAAG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTATTTATTGTTTTTTGAAGTTACTTCTCAATAATTGAAATAAAAG  350

seq1  GAAAAAGGCGTCAGCAATTTTCAACTTAGATTGTAGTATTCCCAAATACA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAGGCGTCAGCAATTTTCAACTTAGATTGTAGTATTCCCAAATACA  400

seq1  GTCAAAATACCTGCCTCAAGGCAATTAGGTAACTGTTTATTGACTTATCC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAAATACCTGCCTCAAGGCAATTAGGTAACTGTTTATTGACTTATCC  450

seq1  AGTAATTATATTAAAGACATGTTGAATTC  476
      |||||||||||||||||||||||||||||
seq2  AGTAATTATATTAAAGACATGTTGAATTC  479

seq1: chr6_75016668_75017370
seq2: B6Ng01-141G09.g_66_768

seq1  GAATTCCAAGCAGCTAGAGCTATATAGCTTTTGGCTATCCCAAAAGCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCAGCTAGAGCTATATAGCTTTTGGCTATCCCAAAAGCTGT  50

seq1  GGAATATGTTGTTCTACCTGAGCTGCCTTGTCTGGCCACATTGGGAGATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATATGTTGTTCTACCTGAGCTGCCTTGTCTGGCCACATTGGGAGATA  100

seq1  TGCCTAGCCATCAAGTGCCAGGAAAGGGGAAGGGTAGAGAGGGATACAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGCCATCAAGTGCCAGGAAAGGGGAAGGGTAGAGAGGGATACAGG  150

seq1  AAGGACTGTAGAGGGGTGGCCTGAAGGGTGACAGTAAGCAGGATGTGAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACTGTAGAGGGGTGGCCTGAAGGGTGACAGTAAGCAGGATGTGAAG  200

seq1  TAAGTTAAAATTAAAGAATAAATAAATAACAAGACATAAAAATGTACATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTAAAATTAAAGAATAAATAAATAACAAGACATAAAAATGTACATA  250

seq1  TTAAGACATTTTGATACTGTGTAAAACAAGGACTTGTGCTCCATTCCTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGACATTTTGATACTGTGTAAAACAAGGACTTGTGCTCCATTCCTTA  300

seq1  GAATCCACATAACAGCTCACAAGTGTCAATAACTCCAGTCTCAGGGAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCCACATAACAGCTCACAAGTGTCAATAACTCCAGTCTCAGGGAATC  350

seq1  AGATACTAATCTGTCCTCTGCACACTGCACTGAGAAGATGCACAGACAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACTAATCTGTCCTCTGCACACTGCACTGAGAAGATGCACAGACAAC  400

seq1  TAAGGAAAATACCCATGCACATAAAATAAAAATAAATAAGAAATTTTAAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAAAATACCCATGCACATAAAATAAAAATAAATAAGAAATTTTAAC  450

seq1  AGAAATTGAAAGATCCTGAAAAACTTATCTATTAGACACATGTGGCAGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTGAAAGATCCTGAAAAACTTATCTATTAGACACATGTGGCAGGG  500

seq1  ATTTACAAGGGTGGGACTGGGAAAAGAGGATAGAAAGGTGCTGTGATTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACAAGGGTGGGACTGGGAAAAGAGGATAGAAAGGTGCTGTGATTGG  550

seq1  AATATAAAGTGAATTTTAGAATGACAAATTAATTAAAATGTATGTGGTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATAAAGTGAATTTTAGAATGACAAATTAATTAAAATGTATGTGGTAT  600

seq1  TACATGTATGTGCATATAATCATTGTATATTCTTTTTAGATATTTATGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGTATGTGCATATAATCATTGTATATTCTTTTTAGATATTTATGTT  650

seq1  CATTTTAAATGTGAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAATGTGAGTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  700

seq1  CTC  703
      |||
seq2  CTC  703