BAC Information

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BAC

Clone NameB6Ng01-141L19
Chromosome6 (Build37)6 (Build37)
Map Location 132,080,666 - 132,081,606132,216,657 - 132,217,300
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC667830, EG434094, Klra2, LOC434095, 2010012C16Rik, Styk1, Csda, LOC625758, 5430401F13Rik, LOC625781, Tas2r130, Tas2r107, Tas2r106, Tas2r104, Tas2r105, Tas2r114, LOC639802, EG114600
Downstream genePrb1, LOC631126, LOC100043878, Prpmp5, EG667929, EG381818, Prh1, Prp2, A630073D07Rik, Tas2r120, Tas2r121, Tas2r122, Tas2r115, Tas2r124, Tas2r102, Tas2r136, Tas2r145-ps3, Tas2r117, Tas2r111-ps2, Tas2r123, Tas2r116, Tas2r110, Tas2r113, Tas2r142-ps5, Tas2r125, Tas2r146-ps1, Tas2r129, Tas2r131, Tas2r109, EG667992, LOC100043634, Tas2r140, LOC668002, Tas2r141-ps4, 2700089E24Rik, LOC630618
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-141L19.bB6Ng01-141L19.g
ACCDH940120DH940121
length1,1301,068
definitionDH940120|Mus musculus domesticus DNA, BAC clone: B6Ng01-141L19, 5' end.DH940121|Mus musculus domesticus DNA, BAC clone: B6Ng01-141L19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(132,080,666 - 132,081,606)(132,216,657 - 132,217,300)
sequence
gaattccataattcaattacaagagtccctggtttctgttcattggttag
gactaagtatctgtgtctatctcagtctgctgcttgttgggcctttcaga
gggtagacatgctatgctcctgtctataagtataccatggcatctgagtc
attctgattggtgtaaggtggaatctcagggtacttttaatttgtatttc
cctgattactgaaaactttgaacatttttaagtgcctctcagttatttga
gattcctctgttatgaattatctgtttagttccttcaacataaaaccata
cacactgtatctaatagaagaggaggtgagaaagaatcttgaactcattg
gcaggggaataggttgtggtagagatttattaaacaaaattacaagggct
cagtttctaagatcaagaactgataaatgggaccttatgaaactgaaaac
cttctgtaaggcacaggataaatctgcaacctacagattggacataaaat
ggttcctcttgtcccatatcctatagagtgttaatatctaaaatatgtaa
ataactcaaggaactaacctctcttccttaaaaaaaaatcaagcaagcaa
acaaacaaaaaaaaggaatcacaaaaatattaggtagaaaactagacaga
gaatttgcaacaggaatctcgaatggctgagaagcacttaaggacatctg
actcaaaacaagaattcttgtcaagtatgcacttctgttgggttctatgc
tctgcacacaagggtccattctgacatataaagattactacaataaagaa
atggaacaatgggtctctctatagataatgtaacaattatacaaaaacca
gactgatgccttttacacaatttttcatgcatgtattctgaatagattac
atttttgaatttaacatttcttttctgtacaattgaaaatgataaagatt
ttatctgggttcattgtttttatgggaaggaattataggtacatggactt
tcagtccttatatttaatttccgtgactgtcttttgattttgcatatata
tttgggagagaatcatatggttaagaattagaggaaagaaaaatgctagg
ggaaagaatggaatcgtggaggaaacgtaa
gaattcaatttggtggagatttgcccctgctgccctgattagctgaagcc
tcgtgactggcgagggggcgtggcctgctgtgcgtggatgagagagagta
taaaaggagtgagaggcccagggttcgggggagatataaacaagaagaat
caggactgaataaactgctgttagaatgactggtggtcgcgtctttcttg
ctggtcgagagcgggcgcgacaattggtggcccatacagggaaccgactc
ccccaccgagttcagaactttcagcagtcagtggttgccagcagggtaag
ttcacggtgagtgaaacttgcgaccccaggagtttgggaaggaactcgga
taaaatagaggtgagcataaagttgccaggaagtagacacaaagtaaccc
aggaatttgggaaggaccttggataaaatagaggcaagcataaagttgcc
aggaagcaggcacaaggtagcgaaaggttccctgctttgggacaagttaa
ggttcccggtttggggacaagttaaggaactatgataacctcagtgtagt
gatcaagagatcctcgctgagtagttatgcttttttctcccattgaccct
ttgtgggtaggtctgatagttttggtcttatttgttctgacatatggact
ctgttactgtttgaaattgtgtgtagaggcagtcaagataggtcagaaaa
tccttatagagcaacaagaaagtatgtcggaagaggagaagggcttaaaa
agaaaaaggaaaaagaaaggagacacagtgttatcagttggacagaaagg
acaaagtaaaagtgctgaggtggaggaggaagtcgaattagcttttgctc
cacctctgtatgcctcctcgtcagccggttatgggccggaccttctgccc
ggaggtctggaaagaagttaggctctccttgctagatgttcctgttttca
ctgaccaaacaggcagagaatatcatgagcttctgaatttcaaggtaatt
aagaattggctggagtcctgtcggacatacggccttgaatggctttctat
actgtggactgaggtaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_132080666_132081606
seq2: B6Ng01-141L19.b_245_1174

seq1  CCTGATTACTGAAAACTTTGAACATTTTTAAGTGCCTCTCAGTTATTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATTACTGAAAACTTTGAACATTTTTAAGTGCCTCTCAGTTATTTGA  50

seq1  GATTCCTCTGTTATGAATTATCTGTTTAGTTCCTTCAACATAAAACCATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCTCTGTTATGAATTATCTGTTTAGTTCCTTCAACATAAAACCATA  100

seq1  CACACTGTATCTAATAGAAGAGGAGGTGAGAAAGAATCTTGAACTCATTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGTATCTAATAGAAGAGGAGGTGAGAAAGAATCTTGAACTCATTG  150

seq1  GCAGGGGAATAGGTTGTGGTAGAGATTTATTAAACAAAATTACAAGGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGGAATAGGTTGTGGTAGAGATTTATTAAACAAAATTACAAGGGCT  200

seq1  CAGTTTCTAAGATCAAGAACTGATAAATGGGACCTTATGAAACTGAAAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCTAAGATCAAGAACTGATAAATGGGACCTTATGAAACTGAAAAC  250

seq1  CTTCTGTAAGGCACAGGATAAATCTGCAACCTACAGATTGGACATAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTAAGGCACAGGATAAATCTGCAACCTACAGATTGGACATAAAAT  300

seq1  GGTTCCTCTTGTCCCATATCCTATAGAGTGTTAATATCTAAAATATGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCTCTTGTCCCATATCCTATAGAGTGTTAATATCTAAAATATGTAA  350

seq1  ATAACTCAAGGAACTAACCTCTCTTCCTTAAAAAAAAATCAAGCAAGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACTCAAGGAACTAACCTCTCTTCCTTAAAAAAAAATCAAGCAAGCAA  400

seq1  ACAAACAAAAAAAAGGAATCACAAAAATATTAGGTAGAAAACTAGACAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAAAAAAAGGAATCACAAAAATATTAGGTAGAAAACTAGACAGA  450

seq1  GAATTTGCAACAGGAATCTCGAATGGCTGAGAAGCACTTAAGGACATCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTGCAACAGGAATCTCGAATGGCTGAGAAGCACTTAAGGACATCTG  500

seq1  ACTCAAAACAAGAATTCTTGTCAAGTATGCACTTCTGTTGGGTTCTATGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAAACAAGAATTCTTGTCAAGTATGCACTTCTGTTGGGTTCTATGC  550

seq1  TCTGCACACAAGGGTCCATTCTGACATATAAAGATTACTACAATAAAGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACACAAGGGTCCATTCTGACATATAAAGATTACTACAATAAAGAA  600

seq1  ATGGAACAATGGGTCTCTCTATAGATAATGTAACAATTATACAAAAACCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAACAATGGGTCTCTCTATAGATAATGTAACAATTATACAAAAACCA  650

seq1  GACTGATGCCTTTTACACAATTTTTCATGCATGTATTCTGAATAGATTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGATGCCTTTTACACAATTTTTCATGCATGTATTCTGAATAGATTAC  700

seq1  ATTTTTGAATTTAACATTTCTTTTCTGTACAATTGAAAATGATAAAGATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGAATTTAACATTTCTTTTCTGTACAATTGAAAATGATAAAGATT  750

seq1  TTATCTGGGTTCATTTGTTTTTATGGGAAGGAATTATAGGTACATGGACT  800
      ||||||||||||| ||||||||||||||||||||||||||||||||||| 
seq2  TTATCTGGGTTCA-TTGTTTTTATGGGAAGGAATTATAGGTACATGGAC-  798

seq1  TTTCAGGTCCTTATATTT-ATTTTCGTGACTGTC-TCTGATTTTTTGCAT  848
      ||||| |||||||||||| |||| |||||||||| | |||  ||||||||
seq2  TTTCA-GTCCTTATATTTAATTTCCGTGACTGTCTTTTGA--TTTTGCAT  845

seq1  ATATATTTGGGAAGAGAATCATATGTTAGATATTAAGAGGAGAAAGAAAA  898
      ||||||||||| ||||||||||||| |  | | | ||||  |||||||||
seq2  ATATATTTGGG-AGAGAATCATATGGTTAAGAATTAGAG--GAAAGAAAA  892

seq1  ATGCTAGGGGGAGAGAAATGGAATTCAGTGGAGGAAACTGTAA  941
      |||||| ||||| || ||||||||   ||||||||||| ||||
seq2  ATGCTA-GGGGAAAG-AATGGAAT--CGTGGAGGAAAC-GTAA  930

seq1: chr6_132216657_132217300
seq2: B6Ng01-141L19.g_488_1135

seq1  GGATAAAATAGAGGCAAGCATAAAGTTGCCAGGAAGCAGGCACAAGGTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAAAATAGAGGCAAGCATAAAGTTGCCAGGAAGCAGGCACAAGGTAG  50

seq1  CGAAAGGTTCCTGGCTTTGGGACAAGTTAAGGTTCCCGGTTTGGGGACAA  100
      |||||||||||  |||||||||||||||||||||||||||||||||||||
seq2  CGAAAGGTTCCCTGCTTTGGGACAAGTTAAGGTTCCCGGTTTGGGGACAA  100

seq1  GTTAAGGAACTATGATAACCTCAGTGTAGTGATCAAGAGATCCTCGCTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAGGAACTATGATAACCTCAGTGTAGTGATCAAGAGATCCTCGCTGA  150

seq1  GTAGTTATGCTTTTTTCTCCCATTGACCCTTTGTGGGTAGGTCTGATAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGTTATGCTTTTTTCTCCCATTGACCCTTTGTGGGTAGGTCTGATAGT  200

seq1  TTTGGTCTTGTTTGTTCTGACATATGGACTCTGTTACTGTTTGAAACTGT  250
      ||||||||| |||||||||||||||||||||||||||||||||||| |||
seq2  TTTGGTCTTATTTGTTCTGACATATGGACTCTGTTACTGTTTGAAATTGT  250

seq1  GTGTAGAGGCAGTCAAGATAGGTCAGAAAATCCTTATAGAGCAACAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAGAGGCAGTCAAGATAGGTCAGAAAATCCTTATAGAGCAACAAGAA  300

seq1  AGTATGTTGGAAGAGGAGAAGGGCTTAAAAAGAAAAAGGAAAAAGAAAGG  350
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGTCGGAAGAGGAGAAGGGCTTAAAAAGAAAAAGGAAAAAGAAAGG  350

seq1  AGACACAGTGTTATCAGTTGGACAGAAAGGACAAAGTCAAAGTGCTGAGG  400
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGACACAGTGTTATCAGTTGGACAGAAAGGACAAAGTAAAAGTGCTGAGG  400

seq1  TGGAGGAGGAAGTCGAATTAGCTTTTGCTCCACCTCCCTATGCCTCCTCG  450
      ||||||||||||||||||||||||||||||||||||  ||||||||||||
seq2  TGGAGGAGGAAGTCGAATTAGCTTTTGCTCCACCTCTGTATGCCTCCTCG  450

seq1  TCAGCCGGTTATGGG-CGGACCTTCTGCCCGGAGGTCTGGAAAGAAGTTA  499
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TCAGCCGGTTATGGGCCGGACCTTCTGCCCGGAGGTCTGGAAAGAAGTTA  500

seq1  GGCTCTCCTTGCTAGGATG-TCCTGTTTTCACTGACCAAACAGGGCAGAG  548
      |||||||||||||| |||| |||||||||||||||||||||| |||||||
seq2  GGCTCTCCTTGCTA-GATGTTCCTGTTTTCACTGACCAAACA-GGCAGAG  548

seq1  -ATATCATGAGCCTCTGGATTTCAAGGTAATTAAGAATTTGGCT-GAGTC  596
       ||||||||||| |||| ||||||||||||||||||| |||||| |||||
seq2  AATATCATGAGCTTCTGAATTTCAAGGTAATTAAGAA-TTGGCTGGAGTC  597

seq1  CGTGCGGACATACGGCC-TGAGT-GCTTTCTATACTGTGG-CTGAGGTAG  643
      |   ||||||||||||| ||| | |||||||||||||||| |||||||||
seq2  CTGTCGGACATACGGCCTTGAATGGCTTTCTATACTGTGGACTGAGGTAG  647

seq1  A  644
      |
seq2  A  648