BAC Information

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BAC

Clone NameB6Ng01-142K07
Chromosome6 (Build37)
Map Location 18,835,442 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142K07.bB6Ng01-142K07.g
ACCDH940785DH940786
length9641,124
definitionDH940785|Mus musculus domesticus DNA, BAC clone: B6Ng01-142K07, 5' end.DH940786|Mus musculus domesticus DNA, BAC clone: B6Ng01-142K07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttggttcagttctgagccccattttttaatggggtttttcaatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctctctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatctattcgc
attcttctacatgaaaacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatgattttatctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtttctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctctcctaggttttttgttattccagatg
aatttgcagattgccctttctaattcattgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgctttcagcaagatagccattt
ttactatattgatcctgccaatcaatgagcatgggagatctttccatctt
ctgagatcttctttgatttctttcttcagagaaaatgttcttatcacaca
gatctttcacttccttagttagagtcacaacaggtatttacattatttgt
gactattgtgaagg

gaattcagaggcagtttactgggagacttttacagagataggttgaagag
aggacaagttagatatgggtaaagatagccagagaatgaaaagcaaccag
aggattagaacagattggtagatgtagtttgagaccaagaagaacaattc
ggtcagaagctgaaagaagccagattgaatcagtcagcttggagaggagt
ttgagccaaaacaactgagttgtatccgctagaaaaagctagaaagagtg
agtttattcagcagtctcagaggctgaaaacaatcaaagtctagattaga
atggatagaggctgcaaagcttccagtagtaggcctaggttagcagatgg
aggcagttagcagccagagatgacaattacaactagtgaataaaagttag
ttttgcagttttgtccttctaccatatggtttcaggggattgaatgcaga
tcttcaaaagtcatccttggcagaagatacctttatcctctaagacatct
gttcaacccaagattttatatttttaaacaaggcctcactatgaagatat
tcctggccatactactatgtacaccaacatggtctcaactcatggcaatc
tgcctgcctcagtcttctgattgttgggataagcactggtcatcaccgtt
tgtgactaaggttatattgctaatttttgaggttgttttgggggtggggg
ctaaatgtgatctcactacgtagctctgactgttctggcactcactattt
agatcagactggcttctaactggcatagatctatctggtccacctcccat
atactggtaatacaggtgcatataacccatcagtatttttttattatctt
tctaaaaatatcttcaccaaaaatataagcatgcttggtaatgcttatgc
tatcaaatggattatccattccacagtatatacatacatattcaaacaaa
tgttttatacatgacaaatagacaccgttttgagaactctgaaatgtaat
ctggacttcatcttacacctcccaatgttgggatataggctatactacct
ccactcaatttgggcaatgcgaagggaaaaaggcaagttagctaggccta
atgagtgcctacattagctcatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-142K07.b_44_571 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||| 
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGA  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      ||||||||||||| || |||||||||||| |||| |||||||||||||||
seq2  ACAACTGGTTGTTTTCATGTAGAAGAATGCGAATAGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGAGAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      |||||||||||||||||||||||||||||||  || ||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATTGAAAAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||| ||||||||
seq2  ATGGGGCTCAGAACTGAACCAAGAATTC  528


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