BAC Information

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BAC

Clone NameB6Ng01-144C14
Chromosome6 (Build37)15 (Build37)
Map Location 18,835,442 - 18,835,96839,992,206 - 39,992,741
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144C14.bB6Ng01-144C14.g
ACCDH941910DH941911
length958977
definitionDH941910|Mus musculus domesticus DNA, BAC clone: B6Ng01-144C14, 5' end.DH941911|Mus musculus domesticus DNA, BAC clone: B6Ng01-144C14, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,442 - 18,835,968)(39,992,206 - 39,992,741)
sequence
gaattctttgttcagttctgagccccattttttaagggggttatttgatt
ttctgaggtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccagtctgttggtggtct
ttttgtcttatagacagtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacatgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttggctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tccacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccaccagaggttcttt
tatccttgagaagagtttttgctatcctcggttttttgttattccagatg
aatttgcaaattgctccttctaattcgttgaagaattgagttggaatttt
aatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttggtcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagggacttgaagttttatcatac
agatctttcacttccttcgttagagtcacgccgagatattttatattatt
tgtggcta
gaattctatacctacccccacccagttaggtctgattccagcagttctct
atgttctgttgcgcgcactcaacaggccaggaagaacgacgctgctacag
gatccttctgcacacatttattcagtcctgtttcttcttgtttatatctc
ccttgtttatatctcccttgtttttatatctcccttgtttttatatctcc
cctgtttatatctcccttgtttttatatctcccccgaaccctgggcctct
cactccttttatactctcagttcccatccacgcacagcaggccacgccac
ctcaccaggcacgcagcttcagctaatcagggcagcaggggcaaatctcc
atcaaattggattcacctgtatcctggtacacctgcagcagcactcaaga
tgtttgtgtcttatatgaggaagtcaggtgcaagtcatatgacttagctg
cagtccctggcgcctttgggactgccgccacacccgctccccacaatgtt
cctaatgatgcaaccctttaatccagttccttgagggctgtggtgaaccc
caaccataaaattatttcatggctacttcataactgtaaattggccactt
ttatgaattgtaatgtaaaattttttggagacagaggtttgccaaggggg
ttgagaagcactgtactacacaggtgacgacaatgatgatcaaaacaaca
actaactataacaatagtaatgatggcatgagcacagcagccacagtagc
tgtatgtaaactgtattaaactcttgtgctaagtacagttgtccttgtat
ccatggagattatccaggacgcatgttatgtcaacataccctgatgctca
agttgcttagtaatgactagcacactttagctcacagttccagggtacag
ccagggagtcaagacggaagaactcatcacatcacatatagacagacaga
cagtataggtagaggtagcgatagatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835442_18835968
seq2: B6Ng01-144C14.b_51_578 (reverse)

seq1  CCAGAGATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGC  50

seq1  TAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGC  100

seq1  ACAACTGGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCT  150
      |||||||||||||||| |||||||||||| ||||||||||||||||||||
seq2  ACAACTGGTTGTTATCATGTAGAAGAATGCGAATCGATCCATACTTATCT  150

seq1  CCATGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACC  200

seq1  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATA  250

seq1  TGGGCAGAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTG  299
      |||||| ||||||||| ||||||||||||||||||||||| |||||||| 
seq2  TGGGCACAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTA  300

seq1  AGGTAGAGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  349
      || | |||||| ||||||||||||||||||||||||||||||||||||||
seq2  AGATCGAGAATTGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAA  350

seq1  GGCAAAAGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAA  399
      |||||||||||| ||| ||||||||||||||||||||||||| |||||||
seq2  GGCAAAAGACACTGTCTATAAGACAAAAAGACCACCAACAGACTGGGAAA  400

seq1  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATCTTTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  499
      ||||||||||||||||||||| |||||||||||||||||||| |||| ||
seq2  AAAGAACTCAAGAAGGTGGACCTCAGAAAATCAAATAACCCCCTTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  527
      ||||||||||||||||||||||||||||
seq2  ATGGGGCTCAGAACTGAACAAAGAATTC  528

seq1: chr15_39992206_39992741
seq2: B6Ng01-144C14.g_68_603 (reverse)

seq1  CCTCAAGGAACTGGATTAAAGGGTTGCATCATTAGGAACATTGTGGGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAAGGAACTGGATTAAAGGGTTGCATCATTAGGAACATTGTGGGGAG  50

seq1  CGGGTGTGGCGGCAGTCCCAAAGGCGCCAGGGACTGCAGCTAAGTCATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTGTGGCGGCAGTCCCAAAGGCGCCAGGGACTGCAGCTAAGTCATAT  100

seq1  GACTTGCACCTGACTTCCTCATATAAGACACAAACATCTTGAGTGCTGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGCACCTGACTTCCTCATATAAGACACAAACATCTTGAGTGCTGCT  150

seq1  GCAGGTGTACCAGGATACAGGTGAATCCAATTTGATGGAGATTTGCCCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGTGTACCAGGATACAGGTGAATCCAATTTGATGGAGATTTGCCCCT  200

seq1  GCTGCCCTGATTAGCTGAAGCTGCGTGCCTGGTGAGGTGGCGTGGCCTGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCCTGATTAGCTGAAGCTGCGTGCCTGGTGAGGTGGCGTGGCCTGC  250

seq1  TGTGCGTGGATGGGAACTGAGAGTATAAAAGGAGTGAGAGGCCCAGGGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCGTGGATGGGAACTGAGAGTATAAAAGGAGTGAGAGGCCCAGGGTT  300

seq1  CGGGGGAGATATAAAAACAAGGGAGATATAAACAGGGGAGATATAAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGGAGATATAAAAACAAGGGAGATATAAACAGGGGAGATATAAAAAC  350

seq1  AAGGGAGATATAAAAACAAGGGAGATATAAACAAGGGAGATATAAACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGAGATATAAAAACAAGGGAGATATAAACAAGGGAGATATAAACAAG  400

seq1  AAGAAACAGGACTGAATAAATGTGTGCAGAAGGATCCTGTAGCAGCGTCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACAGGACTGAATAAATGTGTGCAGAAGGATCCTGTAGCAGCGTCG  450

seq1  TTCTTCCTGGCCTGTTGAGTGCGCGCAACAGAACATAGAGAACTGCTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCCTGGCCTGTTGAGTGCGCGCAACAGAACATAGAGAACTGCTGGA  500

seq1  ATCAGACCTAACTGGGTGGGGGTAGGTATAGAATTC  536
      ||||||||||||||||||||||||||||||||||||
seq2  ATCAGACCTAACTGGGTGGGGGTAGGTATAGAATTC  536