BAC Information

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BAC

Clone NameB6Ng01-146I17
Chromosome6 (Build37)2 (Build37)
Map Location 18,835,448 - 18,835,96876,035,031 - 76,035,306
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146I17.bB6Ng01-146I17.g
ACCDH943663DH943664
length928980
definitionDH943663|Mus musculus domesticus DNA, BAC clone: B6Ng01-146I17, 5' end.DH943664|Mus musculus domesticus DNA, BAC clone: B6Ng01-146I17, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,835,448 - 18,835,968)(76,035,031 - 76,035,306)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcaaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacctccttaggtaagagt
gaattctcacctgaggaataccgaatggcagagaagcacctgaagaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacacaagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccatttttggtg
ggattgcaaacttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacacagtactaccagaggatcccgcaatacctccctgggca
tatatccagaagatgtcccaaccggtaagaaggacacatgctccactatg
ttcatagcagccttagttataatagccagaagctggaaagaacccagatg
cccctcaacagaagaatggatacaaaaaatgtggtacatttacacaatgg
tgtactactcagctattaaaaagaatgaatttatgaaattcctaggcaaa
tggatggacctggagggcatcatcctgagtgaggtaacccaatcacaaaa
gaactcacatgatatgtactcactgataagtggatattaccccagaaatg
tagaatacccaagatataagatacagtttgtgaaacacatgaaacttaag
aagaacgaagaccaaagtgtggatactttgccccttcttagaattgggaa
caaaatacccatggaaggagttacagagacaaagtttggagctgagaaga
aaggatggaccatctagagactgccatacccagggatccatctcataatc
aacctccaaatgctgacaccattgcatgcaccagcagactttgctgaaag
gacactgatatagctgtctcttgtgagactatgctggggcctagcaacac
agaagtggatgctcacagtcagctattggatggacacagggcccccaatg
gaggagctagagaaattacccaaggagctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835448_18835968
seq2: B6Ng01-146I17.b_49_570 (reverse)

seq1  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ATGAACCCACACACCTATGGTCACTTGATCTTTGACAAGGGAGCTAAAAC  50

seq1  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100

seq1  GGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGT  150
      |||||||||| |||||||||||| |||||||||||||||||||||| |||
seq2  GGTTGTTATCGTGTAGAAGAATGCGAATCGATCCATACTTATCTCCTTGT  150

seq1  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200

seq1  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250

seq1  GAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAG  299
       ||||||||| ||||||||||||||||||||||| |||||||| || | |
seq2  CAGGGGAAAAATTCCTGAACAGAACAGCAATGGCTTGTGCTGTAAGATCG  300

seq1  AGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  350

seq1  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  400

seq1  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTATCCTAAATCAGATAGGGGACTAATATCCAACATATATAAAGAA  450

seq1  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAAATGGGG  499
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAAATGGGG  500

seq1  CTCAGAACTGAACAAAGAATTC  521
      ||||||||||||||||||||||
seq2  CTCAGAACTGAACAAAGAATTC  522

seq1: chr2_76035031_76035306
seq2: B6Ng01-146I17.g_774_1046 (reverse)

seq1  CAGCTCTTTGGGTACTTTCTCTAGCTCCTCCATTTGGGGCCCTGTGTTCC  50
      |||||| ||||||| ||||||||||||||||||| ||||||||||| |||
seq2  CAGCTCCTTGGGTAATTTCTCTAGCTCCTCCATTGGGGGCCCTGTG-TCC  49

seq1  ATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCTCGGC  100
      |||||||||||||||||||||||||||||||||| |||||||||| | ||
seq2  ATCCAATAGCTGACTGTGAGCATCCACTTCTGTG-TTGCTAGGCCCCAGC  98

seq1  ATAGCCTCACAAGAGACAGCTATATCAGGGTCTTTTCAGCAAAATCTTGC  150
      |||| ||||||||||||||||||||||| ||| |||||||||| || |||
seq2  ATAGTCTCACAAGAGACAGCTATATCAGTGTCCTTTCAGCAAAGTC-TGC  147

seq1  TGGTGTATGCAATGGTGTCTGCATTTGGAGGTTGATTATGGGATGGATCC  200
      ||||| ||||||||||||| |||||||||||||||||||| |||||||||
seq2  TGGTGCATGCAATGGTGTCAGCATTTGGAGGTTGATTATGAGATGGATCC  197

seq1  CCTGGTGCAGCAGTCTCTAGATGGTCCATCCTTTTGTCTCAGCTCCAAAC  250
      |  |||   |||||||||||||||||||||||||  ||||||||||||||
seq2  CTGGGTATGGCAGTCTCTAGATGGTCCATCCTTTCTTCTCAGCTCCAAAC  247

seq1  TTTGTCTCTGTAACTCCTTCCATGGG  276
      ||||||||||||||||||||||||||
seq2  TTTGTCTCTGTAACTCCTTCCATGGG  273