BAC Information

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BAC

Clone NameB6Ng01-147C07
Chromosome6 (Build37)
Map Location 64,790,621 - 64,858,665
singlet/doubletdoublet
Overlap genenone
Upstream geneGrid2, Atoh1
Downstream geneLOC100041833, LOC667115, Smarcad1, Ptgds2, LOC100042741, LOC100041858, LOC634745, EG667141, C130060K24Rik, 9030611K07Rik, A930038C07Rik, LOC667160, Prdm5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147C07.bB6Ng01-147C07.g
ACCDH944103DH944104
length1,101915
definitionDH944103|Mus musculus domesticus DNA, BAC clone: B6Ng01-147C07, 5' end.DH944104|Mus musculus domesticus DNA, BAC clone: B6Ng01-147C07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(64,790,621 - 64,791,341)(64,857,738 - 64,858,665)
sequence
gaattctaaaagagactggtgcagacttggtgctcctttcccatgcccta
tttagaactagaagtactcacttttgattcagccttactctttttaagat
cctttatgaggctcccatgcccataactgtctgaaataatgtgtttaaac
ctacatgttgttgtaataataatctgtatgctaaattaaaaggcttgcag
gtggtgcagaaaaaaggctggtcacaattggctacagcgaacgagctggg
taccacaaagacatctcactagttccagccagagatctgacccacacaca
cctacatcatgcccagaccctcaagcctcaccagaagggtccctgcctag
ttctgtttactatcccttcttgttcttatgatttctattctctacataga
gataatagacttctgaaattctaagattagaagaagaggggaatgaaagg
aaataaaacttgagacctgtgattcatgtaatgtatgtcaaatagcccaa
agagttgtttgtgagctttgaaacctggggctgagaacatagcagaacag
gccaggacatgcccaggcaggcccgtcgttacatgtcctgactggcctgg
tgcctccctatctcccacccttctgacagtctgttgatgtttaaatggac
caatcatgtgaaaccgtgccaattcctcccccagccccaccccttttcta
taaaaacccctagtttccaagcctcagggtcggaaccactgtctcctgcg
tgagatacgtttctacccggagctccaccattatggctctgccatgtggt
cgacacctctaatgacagagctcctacaggagatatgtgtcggcccggag
ctctgtcattaaactacctcatgcttttacatcaaaaataaataaaaaat
taatgacctcagtccacacccaactttccacaataaagaagtgtaagctt
aaaagactaaatagttagctagtggttaaactgaagaaagagtatagaca
cacttgacttctctatcaaactttaatctctttagacattctagaattgt
catctggtgcacagtcactagaaagctctctttacaggtgtgttcatgaa
c
gaattcatagaaactgtagcagcatgcccagggcctgtataagactaagt
cagatagggtcctagcactgaaaggggagttgacaaatgcccccattcac
tatcttttcatgtcctctcctctctttagatgcttatgtcgtcttgctct
ctctagcttccaaaggaaatgagacttacttggaatgactaatggagaat
tacaaataaactttcaatttttacactgaaattgggcattctatttctct
gtattaatactgatagttaaataatagcagccttcattgatagacaaata
aataggcttccagcaaatgagctcataaactcatatcaatttagattaca
acagaattgtaaataccatcttggattactaacgacaatagataatgact
tcatgtgtaaaatagtgctcttatatgaactacagtgtgtacacagtaca
aagaacagtaaacaagagtctgtgaccaacaacatcatgaccaaaggaaa
cttggagaagaaagaacttatttcaacttatacttccaggtaacaggtta
tcactaactgaaatctgggcaggaaataaaggcagagaacttgcaggcag
aaactgtatcaggatcatggaagagtgttgcttactggcttgctctgcat
ggcttgtccagctacttttcttttttttattagatattttcttcatttac
atttcaaatgctatcctgaaagtcccccataccctccccccgccctgctt
cccaacccacccactcctgcttcctggccctggcattcccctgtactggg
gcatatgatcttcacaataccaagggcctctcctcccattgatggcccac
taagccatcctctgctacatatgcaactagagacacagctctgggggcgg
gggggggtaattgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_64790621_64791341
seq2: B6Ng01-147C07.b_445_1149

seq1  TAGAGATAATAGACTTCTGAAATTCTAAGATTAGAAGAAGAGGGGAATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGATAATAGACTTCTGAAATTCTAAGATTAGAAGAAGAGGGGAATGA  50

seq1  AAGGAAATAAAACTTGAGACCTGTGATTCATGTAATGTATGTCAAATAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAATAAAACTTGAGACCTGTGATTCATGTAATGTATGTCAAATAGC  100

seq1  CCAAAGAGTTGTTTGTGAGCTTTGAAACCTGGGGCTGAGAACATAGCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGAGTTGTTTGTGAGCTTTGAAACCTGGGGCTGAGAACATAGCAGA  150

seq1  ACAGGCCAGGACATGCCCAGGCAGGCCCGTCGTTACATGTCCTGACTGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCCAGGACATGCCCAGGCAGGCCCGTCGTTACATGTCCTGACTGGC  200

seq1  CTGGTGCCTCCCTATCTCCCACCCTTCTGACAGTCTGTTGATGTTTAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCCTCCCTATCTCCCACCCTTCTGACAGTCTGTTGATGTTTAAAT  250

seq1  GGACCAATCATGTGAAACCGTGCCAATTCCTCCCCCAGCCCCACCCCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCAATCATGTGAAACCGTGCCAATTCCTCCCCCAGCCCCACCCCTTT  300

seq1  TCTATAAAAACCCCTAGTTTCCAAGCCTCAGGGTCGGAACCACTGTCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATAAAAACCCCTAGTTTCCAAGCCTCAGGGTCGGAACCACTGTCTCC  350

seq1  TGCGTGAGATACGTTTCTACCCGGAGCTCCACCATTATGGCTCTGCCATG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGTGAGATACGTTTCTACCCGGAGCTCCACCATTATGGCTCTGCCATG  400

seq1  TGGTCGACACCTCTAATGACAGAGCTCCTACAGGAGATATGTGTCGGCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCGACACCTCTAATGACAGAGCTCCTACAGGAGATATGTGTCGGCCC  450

seq1  GGAGCTCTGTCATTAAACTACCTCATGCTTTTACATCAAAAAATAAATAA  500
      ||||||||||||||||||||||||||||||||||||| |||||||||| |
seq2  GGAGCTCTGTCATTAAACTACCTCATGCTTTTACATC-AAAAATAAAT-A  498

seq1  AAAAATTAATGACCTCAGTCCACACCCAACTTTCCACAATAAAGAAGTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTAATGACCTCAGTCCACACCCAACTTTCCACAATAAAGAAGTGT  548

seq1  AAGCTTAAAAAGACTAAATAGTTAGCTAAGTGGTTAAACTGAAGAAAGAG  600
      |||||| |||||||||||||||||||| ||||||||||||||||||||||
seq2  AAGCTT-AAAAGACTAAATAGTTAGCT-AGTGGTTAAACTGAAGAAAGAG  596

seq1  TATAGACCACACTTGACTTTCTCTATTCCAAACTTTAATCTCTTTTAAGA  650
      |||||| |||||||||| ||||||||  |||||||||||||||||  || 
seq2  TATAGA-CACACTTGAC-TTCTCTAT--CAAACTTTAATCTCTTT--AG-  639

seq1  ACATTCTAGAAATTGTCATCT-GTGCACCAGTCCAACTAGATAGCTCTCT  699
      ||||||||| ||||||||||| ||||| |||||  |||||| ||||||||
seq2  ACATTCTAG-AATTGTCATCTGGTGCA-CAGTC--ACTAGAAAGCTCTCT  685

seq1  TTACAGGGTGTGTTCCATGAAC  721
      ||||| |||||||| |||||||
seq2  TTACA-GGTGTGTT-CATGAAC  705

seq1: chr6_64857738_64858665
seq2: B6Ng01-147C07.g_68_982 (reverse)

seq1  AACAATATGAACTAACCAATACCCCCCCCCGCCCCCAGAGCTGTGTCTCT  50
                   ||| | |||||||||||||||||||||||||||||||
seq2  -------------AACAATTACCCCCCCCCGCCCCCAGAGCTGTGTCTCT  37

seq1  AGTTGCATATGTAGCAGAGGATGGCTTAGTGGGCCATCAATGGGAGGAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCATATGTAGCAGAGGATGGCTTAGTGGGCCATCAATGGGAGGAGA  87

seq1  GGCCCTTGGTATTGTGAAGATCATATGCCCCAGTACAGGGGAATGCCAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTTGGTATTGTGAAGATCATATGCCCCAGTACAGGGGAATGCCAGG  137

seq1  GCCAGGAAGCAGGAGTGGGTGGGTTGGGAAGCAGGGCGGGGGGAGGGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGAAGCAGGAGTGGGTGGGTTGGGAAGCAGGGCGGGGGGAGGGTAT  187

seq1  GGGGGACTTTCAGGATAGCATTTGAAATGTAAATGAAGAAAATATCTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGACTTTCAGGATAGCATTTGAAATGTAAATGAAGAAAATATCTAAT  237

seq1  AAAAAAAAGAAAAGTAGCTGGACAAGCCATGCAGAGCAAGCCAGTAAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAGAAAAGTAGCTGGACAAGCCATGCAGAGCAAGCCAGTAAGCA  287

seq1  ACACTCTTCCATGATCCTGATACAGTTTCTGCCTGCAAGTTCTCTGCCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTTCCATGATCCTGATACAGTTTCTGCCTGCAAGTTCTCTGCCTT  337

seq1  TATTTCCTGCCCAGATTTCAGTTAGTGATAACCTGTTACCTGGAAGTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCTGCCCAGATTTCAGTTAGTGATAACCTGTTACCTGGAAGTATA  387

seq1  AGTTGAAATAAGTTCTTTCTTCTCCAAGTTTCCTTTGGTCATGATGTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAAATAAGTTCTTTCTTCTCCAAGTTTCCTTTGGTCATGATGTTGT  437

seq1  TGGTCACAGACTCTTGTTTACTGTTCTTTGTACTGTGTACACACTGTAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACAGACTCTTGTTTACTGTTCTTTGTACTGTGTACACACTGTAGT  487

seq1  TCATATAAGAGCACTATTTTACACATGAAGTCATTATCTATTGTCGTTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATAAGAGCACTATTTTACACATGAAGTCATTATCTATTGTCGTTAG  537

seq1  TAATCCAAGATGGTATTTACAATTCTGTTGTAATCTAAATTGATATGAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCAAGATGGTATTTACAATTCTGTTGTAATCTAAATTGATATGAGT  587

seq1  TTATGAGCTCATTTGCTGGAAGCCTATTTATTTGTCTATCAATGAAGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAGCTCATTTGCTGGAAGCCTATTTATTTGTCTATCAATGAAGGCT  637

seq1  GCTATTATTTAACTATCAGTATTAATACAGAGAAATAGAATGCCCAATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTATTTAACTATCAGTATTAATACAGAGAAATAGAATGCCCAATTT  687

seq1  CAGTGTAAAAATTGAAAGTTTATTTGTAATTCTCCATTAGTCATTCCAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTAAAAATTGAAAGTTTATTTGTAATTCTCCATTAGTCATTCCAAG  737

seq1  TAAGTCTCATTTCCTTTGGAAGCTAGAGAGAGCAAGACGACATAAGCATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTCTCATTTCCTTTGGAAGCTAGAGAGAGCAAGACGACATAAGCATC  787

seq1  TAAAGAGAGGAGAGGACATGAAAAGATAGTGAATGGGGGCATTTGTCAAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAGAGGAGAGGACATGAAAAGATAGTGAATGGGGGCATTTGTCAAC  837

seq1  TCCCCTTTCAGTGCTAGGACCCTATCTGACTTAGTCTTATACAGGCCCTG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTTTCAGTGCTAGGACCCTATCTGACTTAGTCTTATACAGGCCCTG  887

seq1  GGCATGCTGCTACAGTTTCTATGAATTC  928
      ||||||||||||||||||||||||||||
seq2  GGCATGCTGCTACAGTTTCTATGAATTC  915