BAC Information

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BAC

Clone NameB6Ng01-147F15
Chromosome6 (Build37)
Map Location 10,426,809 - 10,427,913
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC330264
Downstream geneLOC100040285, LOC667650, AA545190
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147F15.bB6Ng01-147F15.g
ACCDH944259DH944260
length1,089734
definitionDH944259|Mus musculus domesticus DNA, BAC clone: B6Ng01-147F15, 5' end.DH944260|Mus musculus domesticus DNA, BAC clone: B6Ng01-147F15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctcttttaccagattagccatggccaagtattaggctgagtctg
atagatgagtgctattaactatatttcatagctaacatgtgatgtaaata
aaagaagccactctgacactttttcatgttcagaacataaacacaaaacc
ttcctttatataaataatagtgctagatattggaaaatagtgtaccttat
gatactttttaaaaattacataactaagattttcagttttaagagatact
acaggttgatatagaagactgaaaaaatattttagttactaaaattgtag
ggcatgagaagcatcttataaatttgtaagtcacattgttatattgagat
cacaaatatctgtaaagtcatagtttcctagagaccaatttgcagaatta
catagtgagattagattaatagtcacaactataattacccaaaatttgag
ttttcctattgaaaagtttgtctgaattctatcttaggaaattaactttt
gataaacaaaataatggatattgattgaaaaaggtaacattgtcttttaa
acgtttcatgtaagctaagggaaattgtttccatgtccttaactgaaaaa
aaaaatctttttttttgcaatttttcattagatattttctttatttacat
ttcaaatgctatcccaaaagttccctataccctcccctcgccctgttccc
ctacccacctactcccacttcttggccctggtgttcccctgtattagggc
atatatagtttgcaagactaagactaatctccccaatgatggccgactag
gccatctgctacatatgcagctagagacacacacaaaaaaatcttaatac
acagaaatttcacgtaatcctacgattactgtgaccttaatttttagact
ccctataaatagaagatccatatctggggtaattagactgaatattggct
caaaatattttctggatatataatatcatataaatatttgcttatagtac
gtatatgtgagaaaaaacctgggcatgaatactcagttgcctagactaga
tgagagagaaatggagtcacattagaaatttaaagcctg

gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctactcagctattaaaaagaatg
aatttatgaaattcctagccaaatggatggacctggagggcatcatcctg
agtgagataacccaatcacaaaggaactcacacaatatgtcctcaatgat
aagtggatattagcccaaaacttaggatacccaagatataagatacaatt
tgctaaacgcatgaaactcaagtagagtgaagaccaaagtgtggacactg
tgccccttcttagaattgggaaaaaaacacccatggaaggagttacagag
acaaagtttggagctgtgacgaaaggatggaccatctagagactgccata
tccagggatccatcccataatcagcttccaaatgctgacaccattgcaca
cactagcaagattttgctgaaaggacccagatatagctgtctcttgtgag
actatgccggggcctagcaaacacataaagtggatgctcacagtcagcta
ttggatggatcacagggctcccaatggaggagctagagaaagtacccatg
gtgctaaagggatctgcatccctattggtgggaacaacattatgaactaa
ctactacccccggagctcttgactctagctgcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_10426809_10427913
seq2: B6Ng01-147F15.b_48_1136

seq1  GAATTCCTCTTTTACCAGATTAGCCATGGCCAAGTATTAGGCTGAGTCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTTTTACCAGATTAGCCATGGCCAAGTATTAGGCTGAGTCTG  50

seq1  ATAGATGAGTGCTATTAACTATATTTCATAGCTAACATGTGATGTAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGAGTGCTATTAACTATATTTCATAGCTAACATGTGATGTAAATA  100

seq1  AAAGAAGCCACTCTGACACTTTTTCATGTTCAGAACATAAACACAAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAGCCACTCTGACACTTTTTCATGTTCAGAACATAAACACAAAACC  150

seq1  TTCCTTTATATAAATAATAGTGCTAGATATTGGAAAATAGTGTACCTTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTATATAAATAATAGTGCTAGATATTGGAAAATAGTGTACCTTAT  200

seq1  GATACTTTTTAAAAATTACATAACTAAGATTTTCAGTTTTAAGAGATACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTTTTTAAAAATTACATAACTAAGATTTTCAGTTTTAAGAGATACT  250

seq1  ACAGGTTGATATAGAAGACTGAAAAAATATTTTAGTTACTAAAATTGTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTTGATATAGAAGACTGAAAAAATATTTTAGTTACTAAAATTGTAG  300

seq1  GGCATGAGAAGCATCTTATAAATTTGTAAGTCACATTGTTATATTGAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGAGAAGCATCTTATAAATTTGTAAGTCACATTGTTATATTGAGAT  350

seq1  CACAAATATCTGTAAAGTCATAGTTTCCTAGAGACCAATTTGCAGAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATATCTGTAAAGTCATAGTTTCCTAGAGACCAATTTGCAGAATTA  400

seq1  CATAGTGAGATTAGATTAATAGTCACAACTATAATTACCCAAAATTTGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGAGATTAGATTAATAGTCACAACTATAATTACCCAAAATTTGAG  450

seq1  TTTTCCTATTGAAAAGTTTGTCTGAATTCTATCTTAGGAAATTAACTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTATTGAAAAGTTTGTCTGAATTCTATCTTAGGAAATTAACTTTT  500

seq1  GATAAACAAAATAATGGATATTGATTGAAAAAGGTAACATTGTCTTTTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAACAAAATAATGGATATTGATTGAAAAAGGTAACATTGTCTTTTAA  550

seq1  ACGTTTCATGTAAGCTAAGGGAAATTGTTTCCATGTCCTTAACTGAAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTTCATGTAAGCTAAGGGAAATTGTTTCCATGTCCTTAACTGAAAAA  600

seq1  AAAAATCTTTTTTTTTGCAATTTTTCATTAGATATTTTCTTTATTTACAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATCTTTTTTTTTGCAATTTTTCATTAGATATTTTCTTTATTTACAT  650

seq1  TTCAAATGCTATCCCAAAAGTTCCCTATACCCTCCCCTCGCCCTGTTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAATGCTATCCCAAAAGTTCCCTATACCCTCCCCTCGCCCTGTTCCC  700

seq1  CTACCCACCTACTCCCACTTCTTGGCCCTGGTGTTCCCCTGTATTAGGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCACCTACTCCCACTTCTTGGCCCTGGTGTTCCCCTGTATTAGGGC  750

seq1  ATATATAGTTTGCAAGACTAAGACTAATCTCCCCAATGATGGCCGACTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAGTTTGCAAGACTAAGACTAATCTCCCCAATGATGGCCGACTAG  800

seq1  GCCATCTGCTACATATGCAGCTAGAGACACACACAAAAAAATCTTAATAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCTGCTACATATGCAGCTAGAGACACACACAAAAAAATCTTAATAC  850

seq1  ACAGAAATTTCAGGTAATCCTACGATTACTGTGACCTTAATTTTTTAGAC  900
      |||||||||||| ||||||||||||||||||||||||||| |||||||||
seq2  ACAGAAATTTCACGTAATCCTACGATTACTGTGACCTTAA-TTTTTAGAC  899

seq1  TTCCTATAAATAGAAGATCCATATCTGGGGTAATTAGACTGAATATTGGC  950
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTATAAATAGAAGATCCATATCTGGGGTAATTAGACTGAATATTGGC  949

seq1  TCAAAATATTTTCTGGATAATTATTAATATCAATATTAAATTATTTGGCT  1000
      |||||||||||||||||||  || ||||||| ||||  || ||||| |||
seq2  TCAAAATATTTTCTGGATA--TA-TAATATC-ATAT--AAATATTT-GCT  992

seq1  TATAGTAGGTATATGTGAGAAAAAACCTGGGCCATG-ATACTCAGGGTGC  1049
      ||||||| ||||||||||||||||||||||| |||| ||||||| | |||
seq2  TATAGTACGTATATGTGAGAAAAAACCTGGG-CATGAATACTCA-GTTGC  1040

seq1  CCAGGACTAGAATGAGAGAGAAAAGGGGAGTCACATTAGGAAATATTAAA  1099
      | | |||||| ||||||||||||   |||||||||||||   | ||| ||
seq2  CTA-GACTAG-ATGAGAGAGAAA--TGGAGTCACATTAG---AAATTTAA  1083

seq1  AGCCTG  1105
      ||||||
seq2  AGCCTG  1089


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