BAC Information

Click to search

BAC

Clone NameB6Ng01-147K23
Chromosome6 (Build37)6 (Build37)
Map Location 18,836,030 - 18,836,55613,935,660 - 13,936,873
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147K23.bB6Ng01-147K23.g
ACCDH944494DH944495
length5341,191
definitionDH944494|Mus musculus domesticus DNA, BAC clone: B6Ng01-147K23, 5' end.DH944495|Mus musculus domesticus DNA, BAC clone: B6Ng01-147K23, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,836,030 - 18,836,556)(13,935,660 - 13,936,873)
sequence
taagtttctgggctaatatccacttatcagtgagtatatattgtgtgagt
tctattgtgattgggttacctcactcaggatgatgccctccaggtccatc
catttgcctaggaatttcatattcattctttttaatagctgagtagtact
ccattgtgtaaatgtaccacattttctgtatccattcctctgttgaggga
catctgtgttctttccagcttctggctattacaaataaggctgctatgaa
catagtgtagcatgtgtccttctttctggtgggaacatcttctggatata
tgcccaggagaggtattgctggatcctctggtagtactatgtccaatttt
ctgaggaaccgccagactgatttccagagtggttgtacaagcttgcaatt
ccaccaacaatggaggagtgttcctctttctacacatcctcgccagcatc
tgctgtcacctggattttttatcttagccattctggctggtgtgaggtag
aatctcagggttgttttgatttgcatttccctga
gaattctctcttacagagataattcaaaggtaatatgaaaggtggcctga
aggaagaatatagaggaaacaagaatgccaattagaagtatgatattgca
cttcctagcatagattacaagcaccaacttaaggcaggattagcaattaa
ggcaaagtgatagatataagtgaaattcaatatgctctattgatcaatta
gttatagagttaaaatatcaaaaaggataaagaggttttgcctatttccc
attataaattatcagttaagagttagctttatttctacaaatactttgaa
acaaaatgatatgaattaagaattaaaagacgtattatgtattaaaaact
gttccatttataagattttactctccgccctctctccctctccctcttct
ttgctcccaccttgtctgtctctttctctcatttataaaaaagtactata
acccaaagaagccatcctgaccaaactgaaccagacaccaaccctagttt
ctgtgatattcaccaggaagtcctaattatttctgactgttcatagtaaa
tctatggcattcaatagatgtctttacttatggatctttctattgaaaat
actgttactttattactattcaagcactggaagggtagtttgatttttat
ggatttcttcgttttggagaattttataatgtttacatttccacttgtct
tcccttacttagtatcctctattcaaaacatgtaagtttagaatattata
attctttacataaatcatttctgtatttcactctactaacaatagatatt
agttaattcaaacagtaggtgttattataatttcttagagatgtaagttg
tgtctacattttacaactttgttttaagaccagacttacttgaatttctt
cagtctagctaatcatacaaaattgttatttcagatctgaaaccaaaagc
ttatcaaataaaatcacatagttaatgcttgcagaccgagtctttggaat
atattataatataatatatccttatgcttggttattcttcttcagacata
ctagcattaagcttggctgtcacccttgtcttgactggatttccattgac
aagacaaatactataatgtgcctgaattggggagcccaattggtagaatt
ccatgaagctgacctgggaataatgcactcaaacacattgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18836030_18836556
seq2: B6Ng01-147K23.b_62_586 (reverse)

seq1  TCAGGGAAATGGAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTC  50
      ||||||||||| ||||||||||||||||||||||| |||||||||||| |
seq2  TCAGGGAAATGCAAATCAAAACAACCCTGAGATTCTACCTCACACCAGCC  50

seq1  AGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGTGGATG  100
      |||||||||||||| |||||| |||||||||||||||||||||| |||||
seq2  AGAATGGCTAAGATAAAAAATCCAGGTGACAGCAGATGCTGGCGAGGATG  100

seq1  TGGAGAAAGAGGAACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTAC  150
      || ||||||||||||||||||||||||||||||| |||||| ||||||||
seq2  TGTAGAAAGAGGAACACTCCTCCATTGTTGGTGGAATTGCAAGCTTGTAC  150

seq1  AACCACTCTGGAAATCCGTCTGGCGGTTGCTCAGAAAATTGGACATAGTA  200
      |||||||||||||||| ||||||||||| |||||||||||||||||||||
seq2  AACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGAAAATTGGACATAGTA  200

seq1  CTACTGGAGGATCCAGCATTACCTCTCCTGGGCATATATCCAGAAGATGC  250
      ||||  |||||||||||| |||||||||||||||||||||||||||||| 
seq2  CTACCAGAGGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGT  250

seq1  CCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTAT  300
       || ||  | |||||||||||||||| |||||||||||||||||||||||
seq2  TCCCACCAGAAAGAAGGACACATGCTACACTATGTTCATAGCAGCCTTAT  300

seq1  TTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCCTCAACAGAGGAA  350
      || |||||||||||||||||||||||| |||||| |||||||||||||||
seq2  TTGTAATAGCCAGAAGCTGGAAAGAACACAGATGTCCCTCAACAGAGGAA  350

seq1  TGGATACAGAAAATGTGGTACATTTACACAATGGAGTACTACTCAGCTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATACAGAAAATGTGGTACATTTACACAATGGAGTACTACTCAGCTAT  400

seq1  TAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGG  450
      |||||||||||||  |||||||||||||| ||||||||||||||||||||
seq2  TAAAAAGAATGAA--TATGAAATTCCTAGGCAAATGGATGGACCTGGAGG  448

seq1  GCATCATCCTGAGTGAGGTAACACATTCACAAAGGAACTCACACAATATG  500
      |||||||||||||||||||||| || ||||||  ||||||||||||||| 
seq2  GCATCATCCTGAGTGAGGTAACCCAATCACAATAGAACTCACACAATATA  498

seq1  TACTCACTGCTAATTGGATATTAGCCC  527
      ||||||||| ||| |||||||||||||
seq2  TACTCACTGATAAGTGGATATTAGCCC  525

seq1: chr6_13935660_13936873
seq2: B6Ng01-147K23.g_68_1258 (reverse)

seq1  GCAATGTTTTTGAGTTGCTAATTATTCAGTAGTCAGCTTTCATTTGGATA  50
      ||||||| |||||| |||  |||||||    |||||| ||||  ||||  
seq2  GCAATGTGTTTGAG-TGC--ATTATTCCCAGGTCAGC-TTCA--TGGAAT  44

seq1  CTTACAAATTGGGCTCCCCAA-TCAGCAACGTT-TAGATATCTG-CTTGT  97
        ||| ||||||||||||||| ||||  || || ||| ||| || |||||
seq2  TCTACCAATTGGGCTCCCCAATTCAGGCACATTATAG-TATTTGTCTTGT  93

seq1  CAATGGAAATCCAGTCAAGACAGGGCTGACAGCCAAGCTTAATTGCTTAG  147
      |||||||||||||||||||||| || |||||||||||||||| ||| |||
seq2  CAATGGAAATCCAGTCAAGACAAGGGTGACAGCCAAGCTTAA-TGC-TAG  141

seq1  TATTGTCTTGAAGAAGATATAACCAAGACATAAGGATTATTATTAATATT  197
      || |||| ||||||||| ||||||||| |||||||||   |||| |||||
seq2  TA-TGTC-TGAAGAAGA-ATAACCAAG-CATAAGGAT--ATATT-ATATT  184

seq1  ATAATTATTATTTCCAAAGACTCGGTCTTGCAAGCATTAACTATGTGATT  247
      |||| |||   |||||||||||||||| ||||||||||||||||||||||
seq2  ATAA-TAT--ATTCCAAAGACTCGGTC-TGCAAGCATTAACTATGTGATT  230

seq1  TTTATTTTGATAAGCTTTTGGTTTTCAGAATCTTGAAATAACAATTTTTG  297
      ||   |||||||||||||||| |||||| ||| ||||||||||| |||||
seq2  TT--ATTTGATAAGCTTTTGG-TTTCAG-ATC-TGAAATAACAA-TTTTG  274

seq1  TATGATTAGCTAGACTGAAGAAATTCAAGTAAGTCTGGTCTTAAAACAAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGATTAGCTAGACTGAAGAAATTCAAGTAAGTCTGGTCTTAAAACAAA  324

seq1  GTTGTAAAATGTAGACACAACTTACATCTCTAAGAAATTATAATAACACC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAAAATGTAGACACAACTTACATCTCTAAGAAATTATAATAACACC  374

seq1  TACTGTTTGAATTAACTAATATCTATTGTTAGTAGAGTGAAATACAGAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTTGAATTAACTAATATCTATTGTTAGTAGAGTGAAATACAGAAA  424

seq1  TGATTTATGTAAAGAATTATAATATTCTAAACTTACATGTTTTGAATAGA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTATGTAAAGAATTATAATATTCTAAACTTACATGTTTTGAATAGA  474

seq1  GGATACTAAGTAAGGGAAGACAAGTGGAAATGTAAACATTATAAAATTCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACTAAGTAAGGGAAGACAAGTGGAAATGTAAACATTATAAAATTCT  524

seq1  CCAAAACGAAGAAATCCATAAAAATCAAACTACCCTTCCAGTGCTTGAAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAACGAAGAAATCCATAAAAATCAAACTACCCTTCCAGTGCTTGAAT  574

seq1  AGTAATAAAGTAACAGTATTTTCAATAGAAAGATCCATAAGTAAAGACAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATAAAGTAACAGTATTTTCAATAGAAAGATCCATAAGTAAAGACAT  624

seq1  CTATTGAATGCCATAGATTTACTATGAACAGTCAGAAATAATTAGGACTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGAATGCCATAGATTTACTATGAACAGTCAGAAATAATTAGGACTT  674

seq1  CCTGGTGAATATCACAGAAACTAGGGTTGGTGTCTGGTTCAGTTTGGTCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTGAATATCACAGAAACTAGGGTTGGTGTCTGGTTCAGTTTGGTCA  724

seq1  GGATGGCTTCTTTGGGTTATAGTACTTTTTTATAAATGAGAGAAAGAGAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGGCTTCTTTGGGTTATAGTACTTTTTTATAAATGAGAGAAAGAGAC  774

seq1  AGACAAGGTGGGAGCAAAGAAGAGGGAGAGGGAGAGAGGGCGGAGAGTAA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGGTGGGAGCAAAGAAGAGGGAGAGGGAGAGAGGGCGGAGAGTAA  824

seq1  AATCTTATAAATGGAACAGTTTTTAATACATAATACGTCTTTTAATTCTT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTATAAATGGAACAGTTTTTAATACATAATACGTCTTTTAATTCTT  874

seq1  AATTCATATCATTTTGTTTCAAAGTATTTGTAGAAATAAAGCTAACTCTT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCATATCATTTTGTTTCAAAGTATTTGTAGAAATAAAGCTAACTCTT  924

seq1  AACTGATAATTTATAATGGGAAATAGGCAAAACCTCTTTATCCTTTTTGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGATAATTTATAATGGGAAATAGGCAAAACCTCTTTATCCTTTTTGA  974

seq1  TATTTTAACTCTATAACTAATTGATCAATAGAGCATATTGAATTTCACTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAACTCTATAACTAATTGATCAATAGAGCATATTGAATTTCACTT  1024

seq1  ATATCTATCACTTTGCCTTAATTGCTAATCCTGCCTTAAGTTGGTGCTTG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTATCACTTTGCCTTAATTGCTAATCCTGCCTTAAGTTGGTGCTTG  1074

seq1  TAATCTATGCTAGGAAGTGCAATATCATACTTCTAATTGGCATTCTTGTT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTATGCTAGGAAGTGCAATATCATACTTCTAATTGGCATTCTTGTT  1124

seq1  TCCTCTATATTCTTCCTTCAGGCCACCTTTCATATTACCTTTGAATTATC  1197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTATATTCTTCCTTCAGGCCACCTTTCATATTACCTTTGAATTATC  1174

seq1  TCTGTAAGAGAGAATTC  1214
      |||||||||||||||||
seq2  TCTGTAAGAGAGAATTC  1191