BAC Information

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BAC

Clone NameB6Ng01-148H15
Chromosome6 (Build37)
Map Location 26,651,631 - 26,652,832
singlet/doubletsinglet
Overlap genenone
Upstream genePot1a, EG626912, LOC100041210
Downstream geneLOC100041247, Grm8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148H15.bB6Ng01-148H15.g
ACCDH945076DH945077
length1,1821,275
definitionDH945076|Mus musculus domesticus DNA, BAC clone: B6Ng01-148H15, 5' end.DH945077|Mus musculus domesticus DNA, BAC clone: B6Ng01-148H15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgctcacagggatggtaatagttgtcctatgactaaaactca
catgaaaggcttagcaatatctttataaagcattggattccatctgatga
aaccatactgaattgattctatgtaagaagctgaagttcagtggtaaaat
caccaaattcaccaagactcaaatcaaaggagaataggaaaataatgaat
tatctaaagagggtagaaaggcctaaacacataactatgagagaggactg
gacaatatatagtctctagtctttggatataaatatatatatgcatatat
atatatttcatattacatatttatataagtatataaattatatagtttat
aattatataaaattatacagtgtcttatatattatatatttataggacaa
tgtatatatctaacacatcgaaaagatacataaagtacgcagtatggcaa
gcttgagaaaagagttacctgatgatactgggagttacaggacctatcat
gggatgggcttagtgcaattcagcatagtttggtatccctgaactttgaa
tgcagtgattgcattgggattaaaaaggataatctcgagtgggagttggt
tacatgagcttatttaagattgcattctgttatcttcaaagacatgcttg
cccaaatgtttgcattgagagaatacgatttggacttttaaatggttagt
ctgaaagctatttgaaaatggatttagtttgaagcaatttatatcacctt
aggtcccttgatacaatcatgtggtgttctgactgctctgcttttatcaa
actttccaccttttaagtcacagtacatatctttcctctactttctttgg
tgacaggtgacctgcgtaccttgccgttcagtgtacatgagtggctaaca
ctatacagatagttatattatgcatttccacttcccttttcttttgccgt
ttcatcacttcttttggcaagtcaaatatcctggctaggtatatactcat
tttgcattttgcatccctattttcttccttatggattggcactcatattt
tatttggagattcttctagttaaatgccaccccagctgaggctcacttct
tttcaccatattttgaatacatacattcacagtcctacctgtgcattgac
tagttagtcagtcactgagagtcttatagctt
gaattctctaccagacatagagttagtgaagaccttttctcaatctgtac
attgtcatcttgttctattgacagtgttctttgtcttacataagctttgc
agttttatgaggtcaattttgtcaatttttcatcttagagactgagccat
tggtgttctgctcaggaaaatttcaaggctatttcccattttctcttcta
ttacattcagtatatctgattttatgttgaggttcttgatccacttggat
ctgagctttgtaaaggtgataaatatggatcaatttgcattcttatacat
gcaggctaccagttagatcagtaccacttgttgaagatgctttgtttttt
cctctctatgattttggcttctttgtcaaagataaagtgtctataagtgt
gtggggctatttctgggtcttcaataatattcagttgattgacctgccta
tatttgtaccaatgccatacagtttatttaatcactattgctctgcagta
cagcttgaggtcaagtaatggtgctccccccttaagttcttttaagttaa
gaattgttttcaatatccagagattttgttgttcaatatgaagttgagaa
ttgctcattccatgtctatgaagaattatgttggaattttgatgggtttt
gcattgcatctgtagattgcttttagtaagatggttattttttactatgt
taatcttgccaatccatgagtgttggggacatttccatcttctgaggtat
tttttgatttatttcttcagggacttgaagttcttgtcatatagagtttt
tacttgcttggttagagttacaagatatggatggctaatatccaaaatat
ataaagaattcaaaatgttagactccccccaaaataacccaattacaaac
tggggtatggagctaaacagagaattcacaacacagaatctcaaatggtc
aaagcacttaaggaatattcacatcctttgtcatcagagaaaccaacctc
aaaagactctgggatctacttataccaataagaatggctaggaataaaaa
agtcagtggtatagcacatactggttaggatgtgggagaaagaagaacca
tcctctcaatggctagtgggaatgggaaccgggtggaaacacctctggga
gtcaaacttgggaggtcctgaataatggaagtgtttcctaggaccagaat
cattctcgtgttctctggccatataatctctccagagagtttctgtatac
atctcaaacgagcgcactacggatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_26651631_26652832
seq2: B6Ng01-148H15.b_41_1222

seq1  GAATTCCATGCTCACAGGGATGGTAATAGTTGTCCTATGACTAAAACTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCTCACAGGGATGGTAATAGTTGTCCTATGACTAAAACTCA  50

seq1  CATGAAAGGCTTAGCAATATCTTTATAAAGCATTGGATTCCATCTGATGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAAGGCTTAGCAATATCTTTATAAAGCATTGGATTCCATCTGATGA  100

seq1  AACCATACTGAATTGATTCTATGTAAGAAGCTGAAGTTCAGTGGTAAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATACTGAATTGATTCTATGTAAGAAGCTGAAGTTCAGTGGTAAAAT  150

seq1  CACCAAATTCACCAAGACTCAAATCAAAGGAGAATAGGAAAATAATGAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAATTCACCAAGACTCAAATCAAAGGAGAATAGGAAAATAATGAAT  200

seq1  TATCTAAAGAGGGTAGAAAGGCCTAAACACATAACTATGAGAGAGGACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAAAGAGGGTAGAAAGGCCTAAACACATAACTATGAGAGAGGACTG  250

seq1  GACAATATATAGTCTCTAGTCTTTGGATATAAATATATATATGCATATAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATATATAGTCTCTAGTCTTTGGATATAAATATATATATGCATATAT  300

seq1  ATATATTTCATATTACATATTTATATAAGTATATAAATTATATAGTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATTTCATATTACATATTTATATAAGTATATAAATTATATAGTTTAT  350

seq1  AATTATATAAAATTATACAGTGTCTTATATATTATATATTTATAGGACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATAAAATTATACAGTGTCTTATATATTATATATTTATAGGACAA  400

seq1  TGTATATATCTAACACATCGAAAAGATACATAAAGTACGCAGTATGGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATATCTAACACATCGAAAAGATACATAAAGTACGCAGTATGGCAA  450

seq1  GCTTGAGAAAAGAGTTACCTGATGATACTGGGAGTTACAGGACCTATCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGAGAAAAGAGTTACCTGATGATACTGGGAGTTACAGGACCTATCAT  500

seq1  GGGATGGGCTTAGTGCAATTCAGCATAGTTTGGTATCCCTGAACTTTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATGGGCTTAGTGCAATTCAGCATAGTTTGGTATCCCTGAACTTTGAA  550

seq1  TGCAGTGATTGCATTGGGATTAAAAAGGATAATCTCGAGTGGGAGTTGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTGATTGCATTGGGATTAAAAAGGATAATCTCGAGTGGGAGTTGGT  600

seq1  TACATGAGCTTATTTAAGATTGCATTCTGTTATCTTCAAAGACATGCTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGAGCTTATTTAAGATTGCATTCTGTTATCTTCAAAGACATGCTTG  650

seq1  CCCAAATGTTTGCATTGAGAGAATACGATTTGGACTTTTAAATGGTTAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAATGTTTGCATTGAGAGAATACGATTTGGACTTTTAAATGGTTAGT  700

seq1  CTGAAAGCTATTTGAAAATGGATTTAGTTTGAAGCAATTTATATCACCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAGCTATTTGAAAATGGATTTAGTTTGAAGCAATTTATATCACCTT  750

seq1  AGGTCCCTTGATACAATCATGTGGTGTTCTGACTGCTCTGCTTTTATCAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCCCTTGATACAATCATGTGGTGTTCTGACTGCTCTGCTTTTATCAA  800

seq1  ACTTTCCACCTTTTAAGTCACAGTACATATCTTTCCTCTACTTTCTTTGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCCACCTTTTAAGTCACAGTACATATCTTTCCTCTACTTTCTTTGG  850

seq1  TGACAGGTGACCTGCGTACCTTGCCGTTCAGTGTACATGAGGTGGCTAAC  900
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGACAGGTGACCTGCGTACCTTGCCGTTCAGTGTACATGA-GTGGCTAAC  899

seq1  ACTATACAAGATAGTTATATTATGCATTTCCACTTCCCTTTTCTTTTTGC  950
      ||||||| ||||||||||||||||||||||||||||||||||| ||||||
seq2  ACTATAC-AGATAGTTATATTATGCATTTCCACTTCCCTTTTC-TTTTGC  947

seq1  CGTTTCATCACTTCTTTTGGCAAGTCAAATATCCTGGCTAGGTAATATAA  1000
      ||||||||||||||||||||||||||||||||||||||||||| |||| |
seq2  CGTTTCATCACTTCTTTTGGCAAGTCAAATATCCTGGCTAGGT-ATAT-A  995

seq1  CTCATTTTGCATTTTGCATCTCTATTTTTCTTTCCTTATGGATTGGGCAC  1050
      |||||||||||||||||||| |||||||   ||||||||||||| |||||
seq2  CTCATTTTGCATTTTGCATCCCTATTTT--CTTCCTTATGGATT-GGCAC  1042

seq1  TCATA-TTTATTTGGAGATTC-TCTAGTTTTAAGATGCCCACCCCAGCTG  1098
      ||||| ||||||||||||||| |||||||   | ||| ||||||||||||
seq2  TCATATTTTATTTGGAGATTCTTCTAGTT---AAATG-CCACCCCAGCTG  1088

seq1  AGGCTCACTTCTTATCCACCATATATTG-ATACATACA-TCACAGTTTCC  1146
      ||||||||||||| | |||||||| ||| ||||||||| ||||||  |||
seq2  AGGCTCACTTCTT-TTCACCATATTTTGAATACATACATTCACAG--TCC  1135

seq1  TACCTGTGGCATTGTACTAAAGTTTAGTCAGTCACTGAAGAAGTCCTATA  1196
      ||||||| |||||| ||||    |||||||||||||||   ||||   ||
seq2  TACCTGT-GCATTG-ACTA---GTTAGTCAGTCACTGA--GAGTC--TTA  1176

seq1  TAGCTT  1202
      ||||||
seq2  TAGCTT  1182