BAC Information

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BAC

Clone NameB6Ng01-148P12
Chromosome6 (Build37)
Map Location 129,330,528 - 129,430,788
singlet/doubletdoublet
Overlap gene4933425B16Rik, Clec1b, Clec9a, Clec1a, Clec7a
Upstream geneNrip2, Itfg2, Fkbp4, EG667598, Pzp, LOC384494, EG667610, BC048546, Klrb1a, EG545878, LOC677440, Clec2h, LOC100043863, LOC100043861, Klrb1c, LOC100043862, Klrb1d, LOC667706, Clec2i, Clec2g, LOC667715, BC064078, Clec2f, Klrb1f, Clec2e, Klrb1-ps1, Clec2d, Cd69, 4922502D21Rik, Clec12a
Downstream geneOlr1, D630042F21Rik, Gabarapl1, Klre1, Klrd1, Klrk1, Klrc3, Klrc2, Klrc1, LOC640755, Klri1, Klri2, Gm156, Klra17, Klra5, LOC667764, Klra6, LOC100038893, LOC100038894, LOC100038895, Klra4, LOC667769, LOC100038897, Klra8, EG654449, Klra9, Klra7, LOC100038898, Klra12, Klra10, Klra13, Klra3, Klra1, LOC100038902, LOC100038903, LOC625436, EG625473
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148P12.bB6Ng01-148P12.g
ACCDH945435DH945436
length3171,003
definitionDH945435|Mus musculus domesticus DNA, BAC clone: B6Ng01-148P12, 5' end.DH945436|Mus musculus domesticus DNA, BAC clone: B6Ng01-148P12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,330,528 - 129,330,843)(129,429,779 - 129,430,788)
sequence
cttgcagagtttggtagccatctgctcctgcctctccagtagggcagaga
tctgggactggagagactcctccgtcagactctttctggagctgttcagt
gattcagacagattgtcctgctgtggatggatgcttttctgaagctgact
caacttctctgaatcagagttaatgtcattagacacctgcaaaactgcaa
gacacaatgaggcaagcatatgggagccgctgctcttacaaggctgccag
gctgactcaagagtgtagtcccccggccaccagggattctcctcctcccc
ttccccctcctccccca
gaattctccagcatcctcttaccgtagcttctgttctctggatggcttgg
ccacattctaaacaggctaagcttggacaagcacagagcttattttcttt
cctttctgtcttttttattttatgtttttattgtttgctcacagcttgtt
atccactgtttggaaaatgattgctttgagcatcatgactacttttagtt
ttgggtggaaagcatgcacagtccccactgctccatccaggctttaggca
acagtccaaagtaagttttttttttttttcttttgaagctggggcattag
cattgaaggacgatgtatccggctgaaaacataaataaactgcaaaatat
aaaaaataaactggagtctaagactgaagggtgaatttcttagctgtctg
ctgcagtagctatctgaaagctgatggcagagctgtcttttagacccttg
ctgacggcatatggatcctcactcctctcccctgcagctctcagagagcc
tggtgcatcattgcctgagcctctgttctgaagcaaattccctgatctgg
cctctcctggctgcatctgttagttcatacactgaatactgatcccaacc
cttggctatgctcctgctcttggtattatttaaatcaggtcttaactaga
tacagctctttcctgtggctcatttatgccctgtgtgctgagactattct
tttacattattaaagtggaactaaaaatacatatgcagtgaagtgtaaat
ggcttgtgaatttttaaacatttatctcagtgtgagggggtggggttttt
tcattttgttttgttttggtgttgttcgtttattttttttttccctccag
agacagttttctgacttcgggtataaatttgcaggtgtttacatatgcat
tcctgatgtgaatggagcatgctggtttcatatatggcttctgaagtcag
gactgagtcaaatcactgctgactttctgagtatcaaggcagttactggc
cac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_129330528_129330843
seq2: B6Ng01-148P12.b_51_366

seq1  CTTGCAGAGTTTGGTAGCCATCTGCTCCTGCCTCTCCAGTAGGGCAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCAGAGTTTGGTAGCCATCTGCTCCTGCCTCTCCAGTAGGGCAGAGA  50

seq1  TCTGGGACTGGAGAGACTCCTCCGTCAGACTCTTTCTGGAGCTGTTCAGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGACTGGAGAGACTCCTCCGTCAGACTCTTTCTGGAGCTGTTCAGT  100

seq1  GATTCAGACAGATTGTCCTGCTGTGGATGGATGCTTTTCTGAAGCTGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCAGACAGATTGTCCTGCTGTGGATGGATGCTTTTCTGAAGCTGACT  150

seq1  CAACTTCTCTGAATCAGAGTTAATGTCATTAGACACCTGCAAAACTGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTCTCTGAATCAGAGTTAATGTCATTAGACACCTGCAAAACTGCAA  200

seq1  GACACAATGAGGCAAGCATATGGGAGCCGCTGCTCTTACAAGGCTGCCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAATGAGGCAAGCATATGGGAGCCGCTGCTCTTACAAGGCTGCCAG  250

seq1  GCTGACTCAAGAGTGTAGTCCCCCGGCCACCAGGGATTCTCCTCCTCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACTCAAGAGTGTAGTCCCCCGGCCACCAGGGATTCTCCTCCTCCCC  300

seq1  TTCCCCCTCCTCCCCC  316
      ||||||||||||||||
seq2  TTCCCCCTCCTCCCCC  316

seq1: chr6_129429779_129430788
seq2: B6Ng01-148P12.g_66_1068 (reverse)

seq1  GTGGCCAGTAACTTGCCCTTGATAACTCAGAAAGTCAGCAGTTGAATTTG  50
      |||||||||||||   ||||||| ||||||||||||||||||   |||||
seq2  GTGGCCAGTAACT--GCCTTGAT-ACTCAGAAAGTCAGCAGT--GATTTG  45

seq1  AACTCAGT-CTGACTTCAG-AGCCATATATGAAACCAGCATGCTCATTTC  98
       ||||||| |||||||||| |||||||||||||||||||||||||  |||
seq2  -ACTCAGTCCTGACTTCAGAAGCCATATATGAAACCAGCATGCTCCATTC  94

seq1  ACATTCAAGGAATGCATATGTAAACAACTGCAAATTTATACCCGAAGTCA  148
      ||||   ||||||||||||||||||| |||||||||||||||||||||||
seq2  ACAT--CAGGAATGCATATGTAAACACCTGCAAATTTATACCCGAAGTCA  142

seq1  GAAAACTGTCTCTGGAGGGAAAAAAAAAATAAACGAACAACACCAAAACA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAACTGTCTCTGGAGGGAAAAAAAAAATAAACGAACAACACCAAAACA  192

seq1  AAACAAAATGAAAAAAACCTCACCTCCTCACACTGAGATAAATGTTTAAA  248
      |||||||||| |||||||| |||| |||||||||||||||||||||||||
seq2  AAACAAAATG-AAAAAACCCCACCCCCTCACACTGAGATAAATGTTTAAA  241

seq1  AATTCACAAGCCATTTACACTTCACTGCATATGTATTTTTAGTTCCACTT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCACAAGCCATTTACACTTCACTGCATATGTATTTTTAGTTCCACTT  291

seq1  TAATAATGTAAAAGAATAGTCTCAGCACACAGGGCATAAATGAGCCACAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAATGTAAAAGAATAGTCTCAGCACACAGGGCATAAATGAGCCACAG  341

seq1  GAAAGAGCTGTATCTAGTTAAGACCTGATTTAAATAATACCAAGAGCAGG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAGCTGTATCTAGTTAAGACCTGATTTAAATAATACCAAGAGCAGG  391

seq1  AGCATAGCCAAGGGTTGGGATCAGTATTCAGTGTATGAACTAACAGATGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATAGCCAAGGGTTGGGATCAGTATTCAGTGTATGAACTAACAGATGC  441

seq1  AGCCAGGAGAGGCCAGATCAGGGAATTTGCTTCAGAACAGAGGCTCAGGC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGGAGAGGCCAGATCAGGGAATTTGCTTCAGAACAGAGGCTCAGGC  491

seq1  AATGATGCACCAGGCTCTCTGAGAGCTGCAGGGGAGAGGAGTGAGGATCC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATGCACCAGGCTCTCTGAGAGCTGCAGGGGAGAGGAGTGAGGATCC  541

seq1  ATATGCCGTCAGCAAGGGTCTAAAAGACAGCTCTGCCATCAGCTTTCAGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCCGTCAGCAAGGGTCTAAAAGACAGCTCTGCCATCAGCTTTCAGA  591

seq1  TAGCTACTGCAGCAGACAGCTAAGAAATTCACCCTTCAGTCTTAGACTCC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACTGCAGCAGACAGCTAAGAAATTCACCCTTCAGTCTTAGACTCC  641

seq1  AGTTTATTTTTTATATTTTGCAGTTTATTTATGTTTTCAGCCGGATACAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTATTTTTTATATTTTGCAGTTTATTTATGTTTTCAGCCGGATACAT  691

seq1  CGTCCTTCAATGCTAATGCCCCAGCTTCAAAAGAAAAAAAAAAAAAACTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCCTTCAATGCTAATGCCCCAGCTTCAAAAGAAAAAAAAAAAAAACTT  741

seq1  ACTTTGGACTGTTGCCTAAAGCCTGGATGGAGCAGTGGGGACTGTGCATG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGGACTGTTGCCTAAAGCCTGGATGGAGCAGTGGGGACTGTGCATG  791

seq1  CTTTCCACCCAAAACTAAAAGTAGTCATGATGCTCAAAGCAATCATTTTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCCACCCAAAACTAAAAGTAGTCATGATGCTCAAAGCAATCATTTTC  841

seq1  CAAACAGTGGATAACAAGCTGTGAGCAAACAATAAAAACATAAAATAAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACAGTGGATAACAAGCTGTGAGCAAACAATAAAAACATAAAATAAAA  891

seq1  AAGACAGAAAGGAAAGAAAATAAGCTCTGTGCTTGTCCAAGCTTAGCCTG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGAAAGGAAAGAAAATAAGCTCTGTGCTTGTCCAAGCTTAGCCTG  941

seq1  TTTAGAATGTGGCCAAGCCATCCAGAGAACAGAAGCTACGGTAAGAGGAT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAATGTGGCCAAGCCATCCAGAGAACAGAAGCTACGGTAAGAGGAT  991

seq1  GCTGGAGAATTC  1010
      ||||||||||||
seq2  GCTGGAGAATTC  1003