BAC Information

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BAC

Clone NameB6Ng01-149B10
Chromosome6 (Build37)
Map Location 125,771,441 - 125,845,037
singlet/doubletdoublet
Overlap geneTmem16b
Upstream geneUsp5, Cdca3, Gnb3, Leprel2, Gpr162, Cd4, Lag3, Ptms, Mlf2, EG667343, Cops7a, C530028O21Rik, Zfp384, Ing4, Acrbp, Gpr92, Chd4, Nol1, A930037G23Rik, Gapdh, Ncapd2, Mrpl51, Vamp1, Tapbpl, Cd27, 4930417O13Rik, Tuba3a, Ltbr, Scnn1a, Tnfrsf1a, Plekhg6, Cd9, Vwf
Downstream geneNtf3, LOC100043565, LOC667427, LOC100043567, Kcna5, Kcna1, Kcna6, LOC667463, Ndufa9, Akap3, Dyrk4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149B10.bB6Ng01-149B10.g
ACCDH945521DH945522
length1,1611,203
definitionDH945521|Mus musculus domesticus DNA, BAC clone: B6Ng01-149B10, 5' end.DH945522|Mus musculus domesticus DNA, BAC clone: B6Ng01-149B10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(125,843,863 - 125,845,037)(125,771,441 - 125,772,683)
sequence
gaattctgggggaatgaaataatgatcttggccctaacagcaaaagacaa
aatctaatttacatgctccaggccgtatatggaaaaatcatttaaactga
aacaagaaaagtccaaactgcaagtcaatagtggctaacatcacacatcc
cagtggtatgcgctggcctctgttaccagctacactgctccagcattccc
tgtaattgaacatatttggccttctgttttctgaagagctgtgagcatca
agtctcaagtgctatcctgtgggtgccttgtcccagcttacagggtatat
ttatccacagcttgtctccagccattgtctcatttcatgaacttctcatc
cctctctaacttctcctcatagtccaggccttggagctgtccttatttgt
aacgtcttaatttagatacagcccagtagaaatgtatacaatgagcagag
gagaaggtcttattttagccagaactgctgaggctgagaatgggctgtca
gctgaagagggccagagtctcaaatctgatggcctgggccacccgaggag
cctctgcttggaatgaataactgacatgctccacacagggagatgtttat
ggacacattctatgcttccttggcatcattatccatgaaacccaagctgc
cctggagactgtaagtaaggcgatgtcctaaggatttaaaaagatgtcca
caaccagaacccccagggccttcagacacgcacatgtgtacacacaaatg
catacatgtttgcactaatacacacgtgcacatgcacaaatgaggagggg
ggcattaaagacaacaagaaaaagtgctagcacagatctacttgaagacc
taagagagagaagtcagtgcaagaccccaagagcagatggaaaagaagcc
agccgtctgtcactttaccacctcagttttggtgcagactattgtcacct
tcaaataaattgctatagctttgaaattcagtgtttatattgtacacgtt
tctgctcttggcgtgtgtttcactcttaattctcggttaacacagaaagt
tctttgtgcagctattcccagacttctcattcacgtgcttgtattgtctc
agtgactttatgcatactctaagttaaagtgacttactcagagtagtgca
aacaactcata
gaattccatagggagttgaagaaggaactatctaggtcagaggctccttg
attttggaattcaagtctctctttatttctcagaggaactaaataatatg
gccgtctatttttgtgcttccctggtcttcgtgtgcaatagaatccctgg
acaaatcatggcatcatagaggtggggcaaagcttagaggtcagacattt
tagtgatcatggaaggaatgaagagtcctgctgtttgcagtggtagctag
cagatgcatagggaaggtggcttctttttcttctctttctaatcgggatg
acctcacttcagggcagcttgttactctgctggaggtttcaaggcactgg
aaggtcatggaaagagaaccaggattctgcaaagtcccctcttccagttc
tggttctgctttctgtaccgaatcagaatacccttttgctactcagcttt
ccataactgtgacaaaacgcctggggcggtcaacttaaaagttggaaagg
cttgttctggctcacagtttcagagctttctgtccatggccgtttggtag
cgttggcttacttggggcttatgtagacacatcatggggacagcatgtgg
tagaggaggcctgttcatttgtggccactgtgagactgagtcagaaaggg
gctggagtcccactattccctccaaacttctcctgtaacctaactccatc
cttgaaggaaggaacacatttccccactggtcccaccaactcccaatggc
aacctaggcctttgcagtgtagtcccataacataatatcctattcctgtt
tcctaaggctcatgcccatttcataatgcaaaatgtagacaatttatccc
aagccatagttccatcagaaggaggtgaaacatttaagagttagcttagt
gtctagttttgggccatcatgtcattgctctgagagagaatgggttgccc
acttcaaaaccatgatctgaagaggacattggggtctaagtcccttacat
tctttgattttgcttcatgagtgccacagtttcttgcatgcactctttaa
tgatgttagtgctactacggaactagcatgtagaccaacagccatgactg
aatctagagaccagtccaaagaaactcttcttttaagttgacctttccaa
tatatgctcagtcgagcttacatcttacgtctaggaactctttatatttg
aaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_125843863_125845037
seq2: B6Ng01-149B10.b_48_1208 (reverse)

seq1  TATGAAGTTGTTTGCACTTAACTACTGAGTAAGTCCAACTTTTAACCTAG  50
      |||| |||||||||||||  ||| |||||||||||  || |||||| |||
seq2  TATG-AGTTGTTTGCACT--ACT-CTGAGTAAGTC--AC-TTTAACTTAG  43

seq1  AGGTAATGCATAAAAGTCACTGAGACATTACAGGCACGGTGAATTGAGAA  100
      ||   |||||| ||||||||||||||| |||| |||| ||||| |||| |
seq2  AG--TATGCAT-AAAGTCACTGAGACAATACAAGCAC-GTGAA-TGAG-A  87

seq1  AGTCTGGGAATAGCTGCACAAAGAACTTTCTGTGTTTAACCGAGATTTAA  150
      |||||||||||||||||||||||||||||||||| |||||||||| ||||
seq2  AGTCTGGGAATAGCTGCACAAAGAACTTTCTGTG-TTAACCGAGAATTAA  136

seq1  GAGTGAAACACACGGCCAAGAGCAGAAACGTGTACAATATAAACACTGAA  200
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GAGTGAAACACAC-GCCAAGAGCAGAAACGTGTACAATATAAACACTGAA  185

seq1  TTTCAAAGCTATAGCAATTTATTTGGAGGTGACAATAGTCTGCACC-AAA  249
      ||||||||||||||||||||||||| |||||||||||||||||||| |||
seq2  TTTCAAAGCTATAGCAATTTATTTGAAGGTGACAATAGTCTGCACCAAAA  235

seq1  CTGAGGTGGTAAAGTGACAGACGGCTGGCTTCTTTTCCATCTGCTCTTGG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGTGGTAAAGTGACAGACGGCTGGCTTCTTTTCCATCTGCTCTTGG  285

seq1  GGTCTTGCACTGACTTCTCTCTCTTAGGTCTTCAAGTAGATCTGTGCTAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTGCACTGACTTCTCTCTCTTAGGTCTTCAAGTAGATCTGTGCTAG  335

seq1  CACTTTTTCTTGTTGTCTTTAATGCCCCCCTCCTCATTTGTGCATGTGCA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTTCTTGTTGTCTTTAATGCCCCCCTCCTCATTTGTGCATGTGCA  385

seq1  CGTGTGTATTAGTGCAAACATGTATGCATTTGTGTGTACACATGTGCGTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTGTATTAGTGCAAACATGTATGCATTTGTGTGTACACATGTGCGTG  435

seq1  TCTGAAGGCCCTGGGGGTTCTGGTTGTGGACATCTTTTTAAATCCTTAGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAGGCCCTGGGGGTTCTGGTTGTGGACATCTTTTTAAATCCTTAGG  485

seq1  ACATCGCCTTACTTACAGTCTCCAGGGCAGCTTGGGTTTCATGGATAATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCGCCTTACTTACAGTCTCCAGGGCAGCTTGGGTTTCATGGATAATG  535

seq1  ATGCCAAGGAAGCATAGAATGTGTCCATAAACATCTCCCTGTGTGGAGCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAAGGAAGCATAGAATGTGTCCATAAACATCTCCCTGTGTGGAGCA  585

seq1  TGTCAGTTATTCATTCCAAGCAGAGGCTCCTCGGGTGGCCCAGGCCATCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGTTATTCATTCCAAGCAGAGGCTCCTCGGGTGGCCCAGGCCATCA  635

seq1  GATTTGAGACTCTGGCCCTCTTCAGCTGACAGCCCATTCTCAGCCTCAGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAGACTCTGGCCCTCTTCAGCTGACAGCCCATTCTCAGCCTCAGC  685

seq1  AGTTCTGGCTAAAATAAGACCTTCTCCTCTGCTCATTGTATACATTTCTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGGCTAAAATAAGACCTTCTCCTCTGCTCATTGTATACATTTCTA  735

seq1  CTGGGCTGTATCTAAATTAAGACGTTACAAATAAGGACAGCTCCAAGGCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTGTATCTAAATTAAGACGTTACAAATAAGGACAGCTCCAAGGCC  785

seq1  TGGACTATGAGGAGAAGTTAGAGAGGGATGAGAAGTTCATGAAATGAGAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTATGAGGAGAAGTTAGAGAGGGATGAGAAGTTCATGAAATGAGAC  835

seq1  AATGGCTGGAGACAAGCTGTGGATAAATATACCCTGTAAGCTGGGACAAG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTGGAGACAAGCTGTGGATAAATATACCCTGTAAGCTGGGACAAG  885

seq1  GCACCCACAGGATAGCACTTGAGACTTGATGCTCACAGCTCTTCAGAAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACCCACAGGATAGCACTTGAGACTTGATGCTCACAGCTCTTCAGAAAA  935

seq1  CAGAAGGCCAAATATGTTCAATTACAGGGAATGCTGGAGCAGTGTAGCTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGGCCAAATATGTTCAATTACAGGGAATGCTGGAGCAGTGTAGCTG  985

seq1  GTAACAGAGGCCAGCGCATACCACTGGGATGTGTGATGTTAGCCACTATT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAGAGGCCAGCGCATACCACTGGGATGTGTGATGTTAGCCACTATT  1035

seq1  GACTTGCAGTTTGGACTTTTCTTGTTTCAGTTTAAATGATTTTTCCATAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGCAGTTTGGACTTTTCTTGTTTCAGTTTAAATGATTTTTCCATAT  1085

seq1  ACGGCCTGGAGCATGTAAATTAGATTTTGTCTTTTGCTGTTAGGGCCAAG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGCCTGGAGCATGTAAATTAGATTTTGTCTTTTGCTGTTAGGGCCAAG  1135

seq1  ATCATTATTTCATTCCCCCAGAATTC  1175
      ||||||||||||||||||||||||||
seq2  ATCATTATTTCATTCCCCCAGAATTC  1161

seq1: chr6_125771441_125772683
seq2: B6Ng01-149B10.g_70_1272

seq1  GAATTCCATAGGGAGTTGAAGAAGGAACTATCTAGGTCAGAGGCTCCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAGGGAGTTGAAGAAGGAACTATCTAGGTCAGAGGCTCCTTG  50

seq1  ATTTTGGAATTCAAGTCTCTCTTTATTTCTCAGAGGAACTAAATAATATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGAATTCAAGTCTCTCTTTATTTCTCAGAGGAACTAAATAATATG  100

seq1  GCCGTCTATTTTTGTGCTTCCCTGGTCTTCGTGTGCAATAGAATCCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCGTCTATTTTTGTGCTTCCCTGGTCTTCGTGTGCAATAGAATCCCTGG  150

seq1  ACAAATCATGGCATCATAGAGGTGGGGCAAAGCTTAGAGGTCAGACATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATCATGGCATCATAGAGGTGGGGCAAAGCTTAGAGGTCAGACATTT  200

seq1  TAGTGATCATGGAAGGAATGAAGAGTCCTGCTGTTTGCAGTGGTAGCTAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGATCATGGAAGGAATGAAGAGTCCTGCTGTTTGCAGTGGTAGCTAG  250

seq1  CAGATGCATAGGGAAGGTGGCTTCTTTTTCTTCTCTTTCTAATCGGGATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCATAGGGAAGGTGGCTTCTTTTTCTTCTCTTTCTAATCGGGATG  300

seq1  ACCTCACTTCAGGGCAGCTTGTTACTCTGCTGGAGGTTTCAAGGCACTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCACTTCAGGGCAGCTTGTTACTCTGCTGGAGGTTTCAAGGCACTGG  350

seq1  AAGGTCATGGAAAGAGAACCAGGATTCTGCAAAGTCCCCTCTTCCAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCATGGAAAGAGAACCAGGATTCTGCAAAGTCCCCTCTTCCAGTTC  400

seq1  TGGTTCTGCTTTCTGTACCGAATCAGAATACCCTTTTGCTACTCAGCTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCTGCTTTCTGTACCGAATCAGAATACCCTTTTGCTACTCAGCTTT  450

seq1  CCATAACTGTGACAAAACGCCTGGGGCGGTCAACTTAAAAGTTGGAAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAACTGTGACAAAACGCCTGGGGCGGTCAACTTAAAAGTTGGAAAGG  500

seq1  CTTGTTCTGGCTCACAGTTTCAGAGCTTTCTGTCCATGGCCGTTTGGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTCTGGCTCACAGTTTCAGAGCTTTCTGTCCATGGCCGTTTGGTAG  550

seq1  CGTTGGCTTACTTGGGGCTTATGTAGACACATCATGGGGACAGCATGTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGGCTTACTTGGGGCTTATGTAGACACATCATGGGGACAGCATGTGG  600

seq1  TAGAGGAGGCCTGTTCATTTGTGGCCACTGTGAGACTGAGTCAGAAAGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGGAGGCCTGTTCATTTGTGGCCACTGTGAGACTGAGTCAGAAAGGG  650

seq1  GCTGGAGTCCCACTATTCCCTCCAAACTTCTCCTGTAACCTAACTCCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGTCCCACTATTCCCTCCAAACTTCTCCTGTAACCTAACTCCATC  700

seq1  CTTGAAGGAAGGAACACATTTCCCCACTGGTCCCACCAACTCCCAATGGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGGAAGGAACACATTTCCCCACTGGTCCCACCAACTCCCAATGGC  750

seq1  AACCTAGGCCTTTGCAGTGTAGTCCCATAACATAATATCCTATTCCTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTAGGCCTTTGCAGTGTAGTCCCATAACATAATATCCTATTCCTGTT  800

seq1  TCCTAAGGCTCATGCCCATTTCATAATGCAAAATGTAGACAATTTATCCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGGCTCATGCCCATTTCATAATGCAAAATGTAGACAATTTATCCC  850

seq1  AAGCCATAGTTCCATCAGAAGGAGGTGAAACATTTAAGAGTTAGCTTAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCATAGTTCCATCAGAAGGAGGTGAAACATTTAAGAGTTAGCTTAGT  900

seq1  GTCTAGTTTTGGGCCATCATGTCATTGCTCTGAGAGAGAATGGGTTGCCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGTTTTGGGCCATCATGTCATTGCTCTGAGAGAGAATGGGTTGCCC  950

seq1  ACTTCAAAAACCATGATCTTGAAGAGGACATTGGGGTCCTAGTCCCTTTA  1000
      ||||| |||||||||||| |||||||||||||||||||  |||||| |||
seq2  ACTTC-AAAACCATGATC-TGAAGAGGACATTGGGGTCTAAGTCCC-TTA  997

seq1  CATTCCTTTGATTTTGGCTTCCATGAGTG-CACAGTTTTCTTTGCCATGC  1049
      |||| |||||||||| |||| |||||||| ||||| ||||||   |||||
seq2  CATT-CTTTGATTTT-GCTT-CATGAGTGCCACAG-TTTCTT--GCATGC  1041

seq1  ACTCCTTTAATGATGTTAAGTGCTACTACAGAACCTAGCATGGTAGAACC  1099
      ||| ||||||||||||| ||||||||||| ||| ||||||| |||| |||
seq2  ACT-CTTTAATGATGTT-AGTGCTACTACGGAA-CTAGCAT-GTAG-ACC  1086

seq1  AACCAGCCACAGACTGAAACCTTAGAGACCACAGACCAAAAGAAACCTTT  1149
      || ||||||  ||||||| |  |||||||  ||| || ||||||||   |
seq2  AA-CAGCCA-TGACTGAATC--TAGAGAC--CAGTCC-AAAGAAAC---T  1126

seq1  CTTCTTTTTAAGTTGACTCTTTCACATATTATGCTACAGTGTCAGAAAGC  1199
      |||| |||||||||||| |||||  ||| |||||| ||||       |||
seq2  CTTC-TTTTAAGTTGAC-CTTTCCAATA-TATGCT-CAGT-----CGAGC  1167

seq1  TAACATACTCTTACTGTCTATGTCACCTCTTTATATATTTGAAA  1243
      | |||   |||||| ||||| |  | |||||  |||||||||||
seq2  TTACA---TCTTAC-GTCTAGG--AACTCTT--TATATTTGAAA  1203