BAC Information

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BAC

Clone NameB6Ng01-149J05
Chromosome6 (Build37)
Map Location 85,922,205 - 86,082,570
singlet/doubletdoublet
Overlap geneFigla, Add2
Upstream geneExoc6b, Npm3-ps1, EG545861, EG623016, Spr, LOC665086, LOC665089, Emx1, Sfxn5, Rab11fip5, Noto, Smyd5, 1700040I03Rik, Cct7, Fbxo41, Egr4, Alms1, LOC100043497, EG665134, LOC100043493, Cml3, LOC623273, Cml5, Cml4, LOC100043504, LOC100043508, Cml2, LOC665177, 1700019G17Rik, Cml1, Tprkb, EG434057, LOC665213, Dusp11
Downstream geneTgfa, LOC665233, LOC100043094, LOC100043527, 2010309E21Rik, Snrpg, Pcyox1, Tia1, C87436, 2310040G24Rik, Pcbp1, Asprv1, Mxd1, 2610209M04Rik, Gmcl1, Anxa4, 2610306M01Rik, Aak1, LOC100043555, Nfu1, Gfpt1, D6Ertd527e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149J05.bB6Ng01-149J05.g
ACCDH945879DH945880
length1,1191,025
definitionDH945879|Mus musculus domesticus DNA, BAC clone: B6Ng01-149J05, 5' end.DH945880|Mus musculus domesticus DNA, BAC clone: B6Ng01-149J05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,922,205 - 85,923,316)(86,081,548 - 86,082,570)
sequence
gaattccttccttggttgaaatggtttcttcatttttggcctcctttgac
tctcagaaaagatattcagtgtctggctctgcgcagatcactggtcacat
ttaaattaatgaattcatatttggatgttttcagatttagacaagcccct
tgaattaaactatttgctataatgctatagttaggaacatttcattctga
ctcagactggtagctcacatcagtaatgccagtacaacagtaatgtgagg
cagtgggtgtcctataagttcaagggcagccttggatgtagagggagaca
ttgtcttgagggaaaagcaggcagtttggttaacttaattctaaactgag
taggaagacttaatccctgtgtgtaacgttctgagcacctttttagtggt
gagcctggaaatataaaataggtagagtcttggcatgtatccacaaaatg
tgtagtcatttttagaaatggcagtcacccaagaataaagagcaatgctg
agaaacatgtgaaagaagagtctaggaattgtgatgaaggcgaggcccct
gaacagaaaacgtgaactccttcctcactgcctaacaaaccagggagtgc
tgaggaaaagatccaaccgtgaccttaaaggaggaggcctgagcaggaaa
gctgctatggacatgtgcagaagagggatgggcctctccacaaagcatcc
caggaactctggaaagacctgtttggctgttgcagcaaaaatcctaggct
cagcatgtgccaagagggagatgtatggttcatctcagcatctgtggctt
tatataggaagccagaaaagcccactcttgccagtgtttttagttctgga
tcacagacctttcaggcctttgctactgagaggagcagggttacacagtg
gatgctgaaggctgaagtgaggttgtgaggggcaaagaagccacacagcc
aggtacagttgaagagggcatgttgtatgttcagggacctccaactccag
ccccgaagggactcagatcttctcctgaagttgggaagcttgagtctgga
tgctgcctttattacggtatgaacgttatggttatgatcgagaatggcca
ccttgaagcctggcctctc
gaattccctggcactatcctggtctctgcctgcaaccacacctgccttct
cccccctaggtctggagggatatgtgtctccccagagtggtctcttgtgc
tgcactgtgtattatagacactgcctgctagattagagccacatctgtcc
tgcttggctttgctctacccaactgcatctgctaggactctatttgaaag
ccaggccataagttgaagccgttcagacttgaatgtacattttgaagggg
aaacaagtcagctttgaacagtatgaaaaacagattttctgttcttagca
tggcaggcttacctctccctggcaccactgtcttctcttcagtcaggagg
gcttacccaactctctacacagtccttgacaagtggctctctcagctagc
taagaagaggacccaggaagactgcagggagtcaatctacatttcaaaga
aggctttttttttgttttgtttttttgtttttttcgagacagggtttctc
tatatagccctggctgtcccagaactcactttgtagaccaggctggcctc
aaactcagaaatccgcctgcctctgcctcccaagtgctaggattaaaggc
gtgcaccaccacgcccagctcaaagaaggctttttaaatcagctgtcaac
aaagcagattgcctggcagaggtggctaggcctttaatcctagcactcag
gaggcagagacagtaaaatctctgagttcaagcccagcctggtctataga
gcaagttctggaatggccagggctacacagagaaaccatatctcaaaaag
aagacaagactcagagatcaagactagagaggttaagagaatttctgctt
agttcagtttctagccacccagatctctagcaccaagtccggggacttca
cagtggcctttgaactccagcttgatgttcatcaccttcttctggtctct
gcccaccaccatctgcactcacacatgtacatgaaactaaaataatgagt
cttaaaaccaaacccagacttcctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_85922205_85923316
seq2: B6Ng01-149J05.b_47_1165

seq1  GAATTCCTTCCTTGGTTGAAATGGTTTCTTCATTTTTGGCCTCCTTTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCCTTGGTTGAAATGGTTTCTTCATTTTTGGCCTCCTTTGAC  50

seq1  TCTCAGAAAAGATATTCAGTGTCTGGCTCTGCGCAGATCACTGGTCACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGAAAAGATATTCAGTGTCTGGCTCTGCGCAGATCACTGGTCACAT  100

seq1  TTAAATTAATGAATTCATATTTGGATGTTTTCAGATTTAGACAAGCCCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTAATGAATTCATATTTGGATGTTTTCAGATTTAGACAAGCCCCT  150

seq1  TGAATTAAACTATTTGCTATAATGCTATAGTTAGGAACATTTCATTCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTAAACTATTTGCTATAATGCTATAGTTAGGAACATTTCATTCTGA  200

seq1  CTCAGACTGGTAGCTCACATCAGTAATGCCAGTACAACAGTAATGTGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACTGGTAGCTCACATCAGTAATGCCAGTACAACAGTAATGTGAGG  250

seq1  CAGTGGGTGTCCTATAAGTTCAAGGGCAGCCTTGGATGTAGAGGGAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGGTGTCCTATAAGTTCAAGGGCAGCCTTGGATGTAGAGGGAGACA  300

seq1  TTGTCTTGAGGGAAAAGCAGGCAGTTTGGTTAACTTAATTCTAAACTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTTGAGGGAAAAGCAGGCAGTTTGGTTAACTTAATTCTAAACTGAG  350

seq1  TAGGAAGACTTAATCCCTGTGTGTAACGTTCTGAGCACCTTTTTAGTGGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAGACTTAATCCCTGTGTGTAACGTTCTGAGCACCTTTTTAGTGGT  400

seq1  GAGCCTGGAAATATAAAATAGGTAGAGTCTTGGCATGTATCCACAAAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTGGAAATATAAAATAGGTAGAGTCTTGGCATGTATCCACAAAATG  450

seq1  TGTAGTCATTTTTAGAAATGGCAGTCACCCAAGAATAAAGAGCAATGCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGTCATTTTTAGAAATGGCAGTCACCCAAGAATAAAGAGCAATGCTG  500

seq1  AGAAACATGTGAAAGAAGAGTCTAGGAATTGTGATGAAGGCGAGGCCCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACATGTGAAAGAAGAGTCTAGGAATTGTGATGAAGGCGAGGCCCCT  550

seq1  GAACAGAAAACGTGAACTCCTTCCTCACTGCCTAACAAACCAGGGAGTGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGAAAACGTGAACTCCTTCCTCACTGCCTAACAAACCAGGGAGTGC  600

seq1  TGAGGAAAAGATCCAACCGTGACCTTAAAGGAGGAGGCCTGAGCAGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAAAAGATCCAACCGTGACCTTAAAGGAGGAGGCCTGAGCAGGAAA  650

seq1  GCTGCTATGGACATGTGCAGAAGAGGGATGGGCCTCTCCACAAAGCATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTATGGACATGTGCAGAAGAGGGATGGGCCTCTCCACAAAGCATCC  700

seq1  CAGGAACTCTGGAAAGACCTGTTTGGCTGTTGCAGCAAAAATCCTAGGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAACTCTGGAAAGACCTGTTTGGCTGTTGCAGCAAAAATCCTAGGCT  750

seq1  CAGCATGTGCCAAGAGGGAGATGTATGGTTCATCTCAGCATCTGTGGCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATGTGCCAAGAGGGAGATGTATGGTTCATCTCAGCATCTGTGGCTT  800

seq1  TATATAGGAAGCCAGAAAAGCCCACTCTTGCCAGTGTTTTTAGTTCTGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAGGAAGCCAGAAAAGCCCACTCTTGCCAGTGTTTTTAGTTCTGGA  850

seq1  TCACAGACCTTTCAGGCC-TTGCTACTGAGAGGAGCAGGG-TACACAGTG  898
      |||||||||||||||||| ||||||||||||||||||||| |||||||||
seq2  TCACAGACCTTTCAGGCCTTTGCTACTGAGAGGAGCAGGGTTACACAGTG  900

seq1  GATGCTGAAGGCTGAAGTGAGGTTGTGAGGGGCAAAGAAGCCACACAG-C  947
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GATGCTGAAGGCTGAAGTGAGGTTGTGAGGGGCAAAGAAGCCACACAGCC  950

seq1  AGGGACAGTTGAAGAGGGCATGTTGAATGTTCAGGGACCTCCAACTCCAG  997
      ||| ||||||||||||||||||||| ||||||||||||||||||||||||
seq2  AGGTACAGTTGAAGAGGGCATGTTGTATGTTCAGGGACCTCCAACTCCAG  1000

seq1  CACGAAGGGGACTCAGATCTTCTCCAGAAGTT-GGAAGC-TGAGTCTGGA  1045
      | |  | |||||||||||||||||| |||||| |||||| ||||||||||
seq2  CCCCGAAGGGACTCAGATCTTCTCCTGAAGTTGGGAAGCTTGAGTCTGGA  1050

seq1  TGCTGCTTTAGTTAGGGGATGAAGGTTATGGTTATGATCGAGACT-GCCA  1094
      |||||| ||  ||| || ||||| ||||||||||||||||||| | ||||
seq2  TGCTGCCTTTATTACGGTATGAACGTTATGGTTATGATCGAGAATGGCCA  1100

seq1  CCTTGAAGCTTGG-CTCTC  1112
      ||||||||| ||| |||||
seq2  CCTTGAAGCCTGGCCTCTC  1119

seq1: chr6_86081548_86082570
seq2: B6Ng01-149J05.g_67_1091 (reverse)

seq1  AATGAAGTCTGTGTTTTGTTTTAAGACTCTATTA-TTTAGTTTCATGTAC  49
      || |||||||| |||| |||||||||||| |||| |||||||||||||||
seq2  AAGGAAGTCTGGGTTTGGTTTTAAGACTC-ATTATTTTAGTTTCATGTAC  49

seq1  ATGTGTGAGTGCAGATG--TGTGGGCAGAGACCAGAAGAGGGTGATGGAA  97
      |||||||||||||||||   ||||||||||||||||||| |||||| |||
seq2  ATGTGTGAGTGCAGATGGTGGTGGGCAGAGACCAGAAGAAGGTGAT-GAA  98

seq1  CCTCAAGCTGGAGTTC-AAGGCCACTGTG-AGTCCCCGGACCTTGGTGCT  145
      | |||||||||||||| |||||||||||| |||||||||| |||||||||
seq2  CATCAAGCTGGAGTTCAAAGGCCACTGTGAAGTCCCCGGA-CTTGGTGCT  147

seq1  AGAGATCTGGGT-GCTAGGAACTGAACTAAGCAGAAAATTCTCTTAACCT  194
      |||||||||||| ||||| ||||||||||||||| |||||||||||||||
seq2  AGAGATCTGGGTGGCTAGAAACTGAACTAAGCAG-AAATTCTCTTAACCT  196

seq1  CTCTAGTCTTGATCTCTGAGTCTTGTCTTCTTTTTGAGATATGGTTTCTC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGTCTTGATCTCTGAGTCTTGTCTTCTTTTTGAGATATGGTTTCTC  246

seq1  TGTGTAGCCCTGGCCATTCCAGAACTTGCTCTATAGACCAGGCTGGGCTT  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGCCCTGGCCATTCCAGAACTTGCTCTATAGACCAGGCTGGGCTT  296

seq1  GAACTCAGAGATTTTACTGTCTCTGCCTCCTGAGTGCTAGGATTAAAGGC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGAGATTTTACTGTCTCTGCCTCCTGAGTGCTAGGATTAAAGGC  346

seq1  CTAGCCACCTCTGCCAGGCAATCTGCTTTGTTGACAGCTGATTTAAAAAG  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCCACCTCTGCCAGGCAATCTGCTTTGTTGACAGCTGATTTAAAAAG  396

seq1  CCTTCTTTGAGCTGGGCGTGGTGGTGCACGCCTTTAATCCTAGCACTTGG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTTTGAGCTGGGCGTGGTGGTGCACGCCTTTAATCCTAGCACTTGG  446

seq1  GAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAA  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGAGGCAGGCGGATTTCTGAGTTTGAGGCCAGCCTGGTCTACAAA  496

seq1  GTGAGTTCTGGGACAGCCAGGGCTATATAGAGAAACCCTGTCTCGAAAAA  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTCTGGGACAGCCAGGGCTATATAGAGAAACCCTGTCTCGAAAAA  546

seq1  AACAAAAAAACAAAACAAAAAAAAAGCCTTCTTTGAAATGTAGATTGACT  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAAACAAAACAAAAAAAAAGCCTTCTTTGAAATGTAGATTGACT  596

seq1  CCCTGCAGTCTTCCTGGGTCCTCTTCTTAGCTAGCTGAGAGAGCCACTTG  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCAGTCTTCCTGGGTCCTCTTCTTAGCTAGCTGAGAGAGCCACTTG  646

seq1  TCAAGGACTGTGTAGAGAGTTGGGTAAGCCCTCCTGACTGAAGAGAAGAC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGACTGTGTAGAGAGTTGGGTAAGCCCTCCTGACTGAAGAGAAGAC  696

seq1  AGTGGTGCCAGGGAGAGGTAAGCCTGCCATGCTAAGAACAGAAAATCTGT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTGCCAGGGAGAGGTAAGCCTGCCATGCTAAGAACAGAAAATCTGT  746

seq1  TTTTCATACTGTTCAAAGCTGACTTGTTTCCCCTTCAAAATGTACATTCA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATACTGTTCAAAGCTGACTTGTTTCCCCTTCAAAATGTACATTCA  796

seq1  AGTCTGAACGGCTTCAACTTATGGCCTGGCTTTCAAATAGAGTCCTAGCA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTGAACGGCTTCAACTTATGGCCTGGCTTTCAAATAGAGTCCTAGCA  846

seq1  GATGCAGTTGGGTAGAGCAAAGCCAAGCAGGACAGATGTGGCTCTAATCT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCAGTTGGGTAGAGCAAAGCCAAGCAGGACAGATGTGGCTCTAATCT  896

seq1  AGCAGGCAGTGTCTATAATACACAGTGCAGCACAAGAGACCACTCTGGGG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGCAGTGTCTATAATACACAGTGCAGCACAAGAGACCACTCTGGGG  946

seq1  AGACACATATCCCTCCAGACCTAGGGGGGAGAAGGCAGGTGTGGTTGCAG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACACATATCCCTCCAGACCTAGGGGGGAGAAGGCAGGTGTGGTTGCAG  996

seq1  GCAGAGACCAGGATAGTGCCAGGGAATTC  1023
      |||||||||||||||||||||||||||||
seq2  GCAGAGACCAGGATAGTGCCAGGGAATTC  1025