BAC Information

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BAC

Clone NameB6Ng01-149K17
Chromosome6 (Build37)
Map Location 18,835,448 - 18,835,968
singlet/doubletsinglet
Overlap genenone
Upstream geneSt7, Wnt2, Asz1, LOC386426, LOC636450, LOC100040751, Cftr, Cttnbp2, EG545829, Lsm8, Ankrd7
Downstream geneLOC626180, Eif3s6-ps4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149K17.bB6Ng01-149K17.g
ACCDH945943DH945944
length998159
definitionDH945943|Mus musculus domesticus DNA, BAC clone: B6Ng01-149K17, 5' end.DH945944|Mus musculus domesticus DNA, BAC clone: B6Ng01-149K17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttgttcagtactgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgaatctgatttaggataggtaaagatcctttcccaatctgttgg
tggtctttttgtcttattgacggtttcttttgccttgcagaagctttgga
gtttcatgaggtcccatttgtcaattctcaatcttacagcacaagccatt
gctgttctattcaggaatttttccccgggacccatatctttgagggtttc
ccccactttctcctctataagtttcagtgtctctggttttatatgaagtt
ccttgatccacttagatttgaccttagtacaaggagattggtatggatca
atttgaattcttctatatgataacaaccagttgtaccagcaccaattgtt
gaaaatgctgtctttcttccactggatagttttagctcccttgtcgaaga
tcaagtgaccataggtgtgtgggttcatttctgggtcttcaattctattc
cattggtctacttgtctgtcagtataccagtaccatgcagtttttgtcac
aattgctctgtagtaaagctttaggtcaggcatggtgattccaccagagg
ttcttactctgatgcctaaaccacagaaagatccaacaaagatagagaac
ttcagaccaatttctcttatgaatatcgatgcaaaaatactcaataaaat
tctcgctaaccgaatccaagaacacattaaagcaatcatccatcctgacc
aagtaggttttattccagggatgcagggatggattaatatatggaaatcc
atcaatgtaatccattatatacacaaactcaaagacaaaaccacatgatc
atcacgttagatgcataaaagcattgacaagatctacatccattcatgac
aaaagtcttgtaagatcaggaattcaaggccatacctaaacatgataa
caagctcagggtctgcttcaagtgttgcctaggacattggaacattgatg
gaggcttaactatgtcaaaattaatccttgaaggcactcataataaaaca
atactgaaagagagcacatggatccatacaccagactaacggtgaggggg
ggtggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr6_18835448_18835968
seq2: B6Ng01-149K17.b_46_573 (reverse)

seq1  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAACCCACACACCTATGGTCACTTGATCTTCGACAAGGGAGCTAAAAC  50

seq1  CATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGCACAACT  100
       |||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TATCCAGTGGAAGAAAGACAGCATTTTCAACAATTGGTGCTGGTACAACT  100

seq1  GGTTGTTATCTTGTAGAAGAATGTGAATCGATCCATACTTATCTCCATGT  150
      |||||||||| | |||||||||   ||| |||||||||  |||||| |||
seq2  GGTTGTTATCATATAGAAGAATTCAAATTGATCCATACCAATCTCCTTGT  150

seq1  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCACATAAAACCAGAGAC  200
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  ACTAAGGTCAAATCTAAGTGGATCAAGGAACTTCATATAAAACCAGAGAC  200

seq1  ACTGAAACTTATAGAGGAGAAAGTGGGGAAAAGCCTTGAAGATATGGGCA  250
      |||||||||||||||||||||||||||| ||| |||  ||||||||||  
seq2  ACTGAAACTTATAGAGGAGAAAGTGGGGGAAACCCTCAAAGATATGGGTC  250

seq1  GAGGGGAAAAGTTCCTGAACAGAACAGCAATGGC-TGTGCTGTGAGGTAG  299
        |||||||| |||||||| |||||||||||||| |||||||| || | |
seq2  CCGGGGAAAAATTCCTGAATAGAACAGCAATGGCTTGTGCTGTAAGATTG  300

seq1  AGAATCGACAAATGGGACCTAATGAAACTCCAAAGTTTCTGCAAGGCAAA  349
      ||||| |||||||||||||| |||||||||||||| ||||||||||||||
seq2  AGAATTGACAAATGGGACCTCATGAAACTCCAAAGCTTCTGCAAGGCAAA  350

seq1  AGACACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  399
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCGTCAATAAGACAAAAAGACCACCAACAGATTGGGAAAGGATCT  400

seq1  TTACCTATCCTAAA------TCAGATAGGGGACTAATATCCAACATATAT  443
      ||||||||||||||      ||||||||||||||||||||||||||||||
seq2  TTACCTATCCTAAATCAGATTCAGATAGGGGACTAATATCCAACATATAT  450

seq1  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAATAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAAGAACTCAAGAAGGTGGACTTCAGAAAATCAAATAACCCCATTAAAAA  500

seq1  ATGGGGCTCAGAACTGAACAAAGAATTC  521
      ||||||||||| ||||||||||||||||
seq2  ATGGGGCTCAGTACTGAACAAAGAATTC  528